RNA–Protein interactions for RNA: ENST00000606394.5

CTSA-212, Transcript of cathepsin A, humanhuman

TSL 4

Gene CTSA, Length 584 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-212ENST00000606394 FILIP1Q7Z7B0 1213 aa14.26□□□□□ -0.13
CTSA-212ENST00000606394 GPBP1Q86WP2 473 aa14.26□□□□□ -0.13
CTSA-212ENST00000606394 DDX42Q86XP3 938 aaKnown RBP eCLIP14.26□□□□□ -0.13
CTSA-212ENST00000606394 SCN4BQ8IWT1 228 aa14.26□□□□□ -0.13
CTSA-212ENST00000606394 PGBD3Q8N328 593 aa14.26□□□□□ -0.13
CTSA-212ENST00000606394 TOP6BLQ8N6T0 577 aa14.26□□□□□ -0.13
CTSA-212ENST00000606394 RNF214Q8ND24 703 aa14.26□□□□□ -0.13
CTSA-212ENST00000606394 AK8Q96MA6 479 aa14.26□□□□□ -0.13
CTSA-212ENST00000606394 FIZ1Q96SL8 496 aa14.26□□□□□ -0.13
CTSA-212ENST00000606394 FUCA2Q9BTY2 467 aa14.26□□□□□ -0.13
CTSA-212ENST00000606394 ARHGEF4Q9NR80 690 aa14.26□□□□□ -0.13
CTSA-212ENST00000606394 PCDHB9Q9Y5E1 797 aa14.26□□□□□ -0.13
CTSA-212ENST00000606394 ASXL3Q9C0F0 2248 aa14.26□□□□□ -0.13
CTSA-212ENST00000606394 CEP192Q8TEP8 1941 aa14.25□□□□□ -0.13
CTSA-212ENST00000606394 URB1O60287 2271 aaKnown RBP14.25□□□□□ -0.13
CTSA-212ENST00000606394 ANTXRLA6NF34 631 aa14.25□□□□□ -0.13
CTSA-212ENST00000606394 ANKRD63C9JTQ0 380 aa14.25□□□□□ -0.13
CTSA-212ENST00000606394 GABRDO14764 452 aa14.25□□□□□ -0.13
CTSA-212ENST00000606394 ZNF217O75362 1048 aa14.25□□□□□ -0.13
CTSA-212ENST00000606394 OLFM2O95897 454 aa14.25□□□□□ -0.13
CTSA-212ENST00000606394 ACAT1P24752 427 aaKnown RBP14.25□□□□□ -0.13
CTSA-212ENST00000606394 MAPRE1Q15691 268 aaKnown RBP14.25□□□□□ -0.13
CTSA-212ENST00000606394 COL28A1Q2UY09 1125 aa14.25□□□□□ -0.13
CTSA-212ENST00000606394 FAM171BQ6P995 826 aa14.25□□□□□ -0.13
CTSA-212ENST00000606394 CRELD2Q6UXH1 353 aaPredicted RBP14.25□□□□□ -0.13
CTSA-212ENST00000606394 DENND5BQ6ZUT9 1274 aa14.25□□□□□ -0.13
CTSA-212ENST00000606394 NUDT18Q6ZVK8 323 aa14.25□□□□□ -0.13
CTSA-212ENST00000606394 DPH6Q7L8W6 267 aa14.25□□□□□ -0.13
CTSA-212ENST00000606394 CACTINQ8WUQ7 758 aaKnown RBP14.25□□□□□ -0.13
CTSA-212ENST00000606394 USP28Q96RU2 1077 aa14.25□□□□□ -0.13
CTSA-212ENST00000606394 PLIN2Q99541 437 aa14.25□□□□□ -0.13
CTSA-212ENST00000606394 TTLL2Q9BWV7 592 aa14.25□□□□□ -0.13
CTSA-212ENST00000606394 FAM124BQ9H5Z6 455 aaPredicted RBP14.25□□□□□ -0.13
CTSA-212ENST00000606394 RTN4Q9NQC3 1192 aaKnown RBP14.25□□□□□ -0.13
CTSA-212ENST00000606394 TBC1D14Q9P2M4 693 aa14.25□□□□□ -0.13
CTSA-212ENST00000606394 DKK4Q9UBT3 224 aa14.25□□□□□ -0.13
CTSA-212ENST00000606394 SUSD2Q9UGT4 822 aa14.25□□□□□ -0.13
CTSA-212ENST00000606394 ITGA11Q9UKX5 1188 aa14.25□□□□□ -0.13
CTSA-212ENST00000606394 APOBEC2Q9Y235 224 aaKnown RBP14.25□□□□□ -0.13
CTSA-212ENST00000606394 ADAMTS9Q9P2N4 1935 aa14.25□□□□□ -0.13
CTSA-212ENST00000606394 ZNF840PA6NDX5 716 aa14.24□□□□□ -0.13
CTSA-212ENST00000606394 ESPNB1AK53 854 aa14.24□□□□□ -0.13
CTSA-212ENST00000606394 ZBTB24O43167 697 aaPredicted RBP14.24□□□□□ -0.13
CTSA-212ENST00000606394 TBCAO75347 108 aaKnown RBP14.24□□□□□ -0.13
CTSA-212ENST00000606394 GJB3O75712 270 aa14.24□□□□□ -0.13
CTSA-212ENST00000606394 FTH1P19P0C7X4 201 aa14.24□□□□□ -0.13
CTSA-212ENST00000606394 ADH5P11766 374 aa14.24□□□□□ -0.13
CTSA-212ENST00000606394 POLR2BP30876 1174 aaKnown RBP14.24□□□□□ -0.13
CTSA-212ENST00000606394 SLC6A11P48066 632 aa14.24□□□□□ -0.13
CTSA-212ENST00000606394 TFAMQ00059 246 aaKnown RBP14.24□□□□□ -0.13
CTSA-212ENST00000606394 RHBDF2Q6PJF5 856 aa14.24□□□□□ -0.13
CTSA-212ENST00000606394 RBM43Q6ZSC3 357 aaKnown RBP14.24□□□□□ -0.13
CTSA-212ENST00000606394 GLRX5Q86SX6 157 aa14.24□□□□□ -0.13
CTSA-212ENST00000606394 ADGRF2Q8IZF7 708 aa14.24□□□□□ -0.13
CTSA-212ENST00000606394 POMGNT1Q8WZA1 660 aa14.24□□□□□ -0.13
CTSA-212ENST00000606394 HVCN1Q96D96 273 aa14.24□□□□□ -0.13
CTSA-212ENST00000606394 OTUB2Q96DC9 234 aa14.24□□□□□ -0.13
CTSA-212ENST00000606394 DUSP9Q99956 384 aaKnown RBP14.24□□□□□ -0.13
CTSA-212ENST00000606394 ZDHHC5Q9C0B5 715 aa14.24□□□□□ -0.13
CTSA-212ENST00000606394 FSCN3Q9NQT6 498 aa14.24□□□□□ -0.13
CTSA-212ENST00000606394 MAGEC2Q9UBF1 373 aaPredicted RBP14.24□□□□□ -0.13
CTSA-212ENST00000606394 CCDC39Q9UFE4 941 aa14.24□□□□□ -0.13
CTSA-212ENST00000606394 AGAP1Q9UPQ3 857 aa14.24□□□□□ -0.13
CTSA-212ENST00000606394 VWA3AA6NCI4 1184 aa14.23□□□□□ -0.13
CTSA-212ENST00000606394 EIF4E1BA6NMX2 242 aaKnown RBP14.23□□□□□ -0.13
CTSA-212ENST00000606394 ITGB3P05106 788 aa14.23□□□□□ -0.13
CTSA-212ENST00000606394 KRT18P05783 430 aaKnown RBP14.23□□□□□ -0.13
CTSA-212ENST00000606394 ANXA13P27216 316 aa14.23□□□□□ -0.13
CTSA-212ENST00000606394 NOP14P78316 857 aaKnown RBP14.23□□□□□ -0.13
CTSA-212ENST00000606394 MESP2Q0VG99 397 aa14.23□□□□□ -0.13
CTSA-212ENST00000606394 STK38Q15208 465 aa14.23□□□□□ -0.13
CTSA-212ENST00000606394 EMC10Q5UCC4 262 aa14.23□□□□□ -0.13
CTSA-212ENST00000606394 NAXDQ8IW45 347 aa14.23□□□□□ -0.13
CTSA-212ENST00000606394 SFTPA1Q8IWL2 248 aa14.23□□□□□ -0.13
CTSA-212ENST00000606394 PHTF2Q8N3S3 785 aa14.23□□□□□ -0.13
CTSA-212ENST00000606394 ZNF513Q8N8E2 541 aaPredicted RBP14.23□□□□□ -0.13
CTSA-212ENST00000606394 C1orf127Q8N9H9 656 aa14.23□□□□□ -0.13
CTSA-212ENST00000606394 CALML4Q96GE6 196 aa14.23□□□□□ -0.13
CTSA-212ENST00000606394 RNF38Q9H0F5 515 aa14.23□□□□□ -0.13
CTSA-212ENST00000606394 CALCOCO1Q9P1Z2 691 aa14.23□□□□□ -0.13
CTSA-212ENST00000606394 KIAA1522Q9P206 1035 aaPredicted RBP14.23□□□□□ -0.13
CTSA-212ENST00000606394 CDH9Q9ULB4 789 aa14.23□□□□□ -0.13
CTSA-212ENST00000606394 SNX9Q9Y5X1 595 aa14.23□□□□□ -0.13
CTSA-212ENST00000606394 CPQQ9Y646 472 aa14.23□□□□□ -0.13
CTSA-212ENST00000606394 CFAP46Q8IYW2 2715 aa14.22□□□□□ -0.13
CTSA-212ENST00000606394 A0A1W2PQ27 194 aa14.22□□□□□ -0.13
CTSA-212ENST00000606394 A0A1W2PQ64 194 aa14.22□□□□□ -0.13
CTSA-212ENST00000606394 E2F8A0AVK6 867 aa14.22□□□□□ -0.13
CTSA-212ENST00000606394 TBC1D3BA6NDS4 549 aa14.22□□□□□ -0.13
CTSA-212ENST00000606394 TISP43B9A030 160 aa14.22□□□□□ -0.13
CTSA-212ENST00000606394 TRIM66O15016 1216 aa14.22□□□□□ -0.13
CTSA-212ENST00000606394 SH3BP5O60239 455 aa14.22□□□□□ -0.13
CTSA-212ENST00000606394 BMP15O95972 392 aa14.22□□□□□ -0.13
CTSA-212ENST00000606394 OAS1P00973 400 aaKnown RBP14.22□□□□□ -0.13
CTSA-212ENST00000606394 GNSP15586 552 aa14.22□□□□□ -0.13
CTSA-212ENST00000606394 GABRG2P18507 467 aa14.22□□□□□ -0.13
CTSA-212ENST00000606394 ADSSP30520 456 aa14.22□□□□□ -0.13
CTSA-212ENST00000606394 GRIK1P39086 918 aa14.22□□□□□ -0.13
CTSA-212ENST00000606394 ME1P48163 572 aa14.22□□□□□ -0.13
CTSA-212ENST00000606394 RBP5P82980 135 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms