RNA–Protein interactions for RNA: ENST00000602897.1

PPFIA3-212, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 2

Gene PPFIA3, Length 1,615 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-212ENST00000602897 CACNG4Q9UBN1 327 aa23.41■■□□□ 1.34
PPFIA3-212ENST00000602897 PCDHB8Q9UN66 801 aa23.41■■□□□ 1.34
PPFIA3-212ENST00000602897 C2CD4BA6NLJ0 364 aa23.41■■□□□ 1.34
PPFIA3-212ENST00000602897 NPR3P17342 541 aa23.41■■□□□ 1.34
PPFIA3-212ENST00000602897 IGFBP6P24592 240 aaPredicted RBP23.41■■□□□ 1.34
PPFIA3-212ENST00000602897 PTPN7P35236 360 aa23.41■■□□□ 1.34
PPFIA3-212ENST00000602897 GATMP50440 423 aa23.41■■□□□ 1.34
PPFIA3-212ENST00000602897 DHX34Q14147 1143 aaKnown RBP23.41■■□□□ 1.34
PPFIA3-212ENST00000602897 MAPRE1Q15691 268 aaKnown RBP23.41■■□□□ 1.34
PPFIA3-212ENST00000602897 CMTR2Q8IYT2 770 aaKnown RBP23.41■■□□□ 1.34
PPFIA3-212ENST00000602897 ABI1Q8IZP0 508 aa23.41■■□□□ 1.34
PPFIA3-212ENST00000602897 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP23.41■■□□□ 1.34
PPFIA3-212ENST00000602897 TBC1D13Q9NVG8 400 aa23.41■■□□□ 1.34
PPFIA3-212ENST00000602897 DMGDHQ9UI17 866 aaKnown RBP23.41■■□□□ 1.34
PPFIA3-212ENST00000602897 TULP2O00295 520 aa23.4■■□□□ 1.34
PPFIA3-212ENST00000602897 TRAPPC3O43617 180 aa23.4■■□□□ 1.34
PPFIA3-212ENST00000602897 PHF2O75151 1096 aa23.4■■□□□ 1.34
PPFIA3-212ENST00000602897 ATP2C2O75185 946 aa23.4■■□□□ 1.34
PPFIA3-212ENST00000602897 ACAT1P24752 427 aaKnown RBP23.4■■□□□ 1.34
PPFIA3-212ENST00000602897 RNASELQ05823 741 aaKnown RBP23.4■■□□□ 1.34
PPFIA3-212ENST00000602897 MDH1BQ5I0G3 518 aa23.4■■□□□ 1.34
PPFIA3-212ENST00000602897 SLC26A9Q7LBE3 791 aa23.4■■□□□ 1.34
PPFIA3-212ENST00000602897 C12orf50Q8NA57 414 aaPredicted RBP23.4■■□□□ 1.34
PPFIA3-212ENST00000602897 HDAC7Q8WUI4 952 aa23.4■■□□□ 1.34
PPFIA3-212ENST00000602897 CRTAC1Q9NQ79 661 aa23.4■■□□□ 1.34
PPFIA3-212ENST00000602897 GDF3Q9NR23 364 aa23.4■■□□□ 1.34
PPFIA3-212ENST00000602897 FAM187AA6NFU0 413 aa23.39■■□□□ 1.33
PPFIA3-212ENST00000602897 PAPSS1O43252 624 aaPredicted RBP23.39■■□□□ 1.33
PPFIA3-212ENST00000602897 RAD51CO43502 376 aa23.39■■□□□ 1.33
PPFIA3-212ENST00000602897 DDHD2O94830 711 aa23.39■■□□□ 1.33
PPFIA3-212ENST00000602897 FAM200BP0CF97 657 aa23.39■■□□□ 1.33
PPFIA3-212ENST00000602897 TKTP29401 623 aaKnown RBP23.39■■□□□ 1.33
PPFIA3-212ENST00000602897 CTNNB1P35222 781 aa23.39■■□□□ 1.33
PPFIA3-212ENST00000602897 EFHC1Q5JVL4 640 aa23.39■■□□□ 1.33
PPFIA3-212ENST00000602897 AADACL2Q6P093 401 aa23.39■■□□□ 1.33
PPFIA3-212ENST00000602897 FAM171BQ6P995 826 aa23.39■■□□□ 1.33
PPFIA3-212ENST00000602897 PAQR9Q6ZVX9 377 aa23.39■■□□□ 1.33
PPFIA3-212ENST00000602897 PHF6Q8IWS0 365 aaKnown RBP eCLIP23.39■■□□□ 1.33
PPFIA3-212ENST00000602897 CLP1Q92989 425 aaKnown RBP23.39■■□□□ 1.33
PPFIA3-212ENST00000602897 MED10Q9BTT4 135 aa23.39■■□□□ 1.33
PPFIA3-212ENST00000602897 B3GNT5Q9BYG0 378 aa23.39■■□□□ 1.33
PPFIA3-212ENST00000602897 DDX47Q9H0S4 455 aaKnown RBP23.39■■□□□ 1.33
PPFIA3-212ENST00000602897 EFR3BQ9Y2G0 817 aa23.39■■□□□ 1.33
PPFIA3-212ENST00000602897 RWDD3Q9Y3V2 267 aa23.39■■□□□ 1.33
PPFIA3-212ENST00000602897 LRCH4O75427 683 aa23.38■■□□□ 1.33
PPFIA3-212ENST00000602897 GABBR2O75899 941 aa23.38■■□□□ 1.33
PPFIA3-212ENST00000602897 HEXIM1O94992 359 aaKnown RBP23.38■■□□□ 1.33
PPFIA3-212ENST00000602897 LINC00271P0C7V0 271 aa23.38■■□□□ 1.33
PPFIA3-212ENST00000602897 PDGFRAP16234 1089 aa23.38■■□□□ 1.33
PPFIA3-212ENST00000602897 BMPR1AP36894 532 aa23.38■■□□□ 1.33
PPFIA3-212ENST00000602897 BRCC3P46736 316 aa23.38■■□□□ 1.33
PPFIA3-212ENST00000602897 ODF2Q5BJF6 829 aa23.38■■□□□ 1.33
PPFIA3-212ENST00000602897 KIAA0319Q5VV43 1072 aa23.38■■□□□ 1.33
PPFIA3-212ENST00000602897 ZNF280BQ86YH2 543 aa23.38■■□□□ 1.33
PPFIA3-212ENST00000602897 SCUBE3Q8IX30 993 aa23.38■■□□□ 1.33
PPFIA3-212ENST00000602897 PRELID2Q8N945 189 aa23.38■■□□□ 1.33
PPFIA3-212ENST00000602897 RXFP2Q8WXD0 754 aa23.38■■□□□ 1.33
PPFIA3-212ENST00000602897 MRPL9Q9BYD2 267 aaKnown RBP23.38■■□□□ 1.33
PPFIA3-212ENST00000602897 LRRC19Q9H756 370 aa23.38■■□□□ 1.33
PPFIA3-212ENST00000602897 PCYOX1Q9UHG3 505 aa23.38■■□□□ 1.33
PPFIA3-212ENST00000602897 MRPL42Q9Y6G3 142 aaKnown RBP23.38■■□□□ 1.33
PPFIA3-212ENST00000602897 A0A0C4DFX4 3053 aa23.38■■□□□ 1.33
PPFIA3-212ENST00000602897 PRRC2BQ5JSZ5 2229 aaKnown RBP23.38■■□□□ 1.33
PPFIA3-212ENST00000602897 BHMG1C9JSJ3 638 aaPredicted RBP23.37■■□□□ 1.33
PPFIA3-212ENST00000602897 FNTAP49354 379 aa23.37■■□□□ 1.33
PPFIA3-212ENST00000602897 SLC7A5Q01650 507 aa23.37■■□□□ 1.33
PPFIA3-212ENST00000602897 GPM6BQ13491 265 aa23.37■■□□□ 1.33
PPFIA3-212ENST00000602897 INTS6LQ5JSJ4 861 aaKnown RBP23.37■■□□□ 1.33
PPFIA3-212ENST00000602897 BEND6Q5SZJ8 279 aaPredicted RBP23.37■■□□□ 1.33
PPFIA3-212ENST00000602897 OVOS1Q6IE37 1185 aa23.37■■□□□ 1.33
PPFIA3-212ENST00000602897 PIGZQ86VD9 579 aa23.37■■□□□ 1.33
PPFIA3-212ENST00000602897 EMC1Q8N766 993 aa23.37■■□□□ 1.33
PPFIA3-212ENST00000602897 OSBPL8Q9BZF1 889 aa23.37■■□□□ 1.33
PPFIA3-212ENST00000602897 LMCD1Q9NZU5 365 aa23.37■■□□□ 1.33
PPFIA3-212ENST00000602897 NR2E1Q9Y466 385 aa23.37■■□□□ 1.33
PPFIA3-212ENST00000602897 TIMM13Q9Y5L4 95 aaPredicted RBP23.37■■□□□ 1.33
PPFIA3-212ENST00000602897 TBKBP1A7MCY6 615 aa23.37■■□□□ 1.33
PPFIA3-212ENST00000602897 H3BNC9 293 aa23.37■■□□□ 1.33
PPFIA3-212ENST00000602897 FBXO21O94952 628 aa23.37■■□□□ 1.33
PPFIA3-212ENST00000602897 RARAP10276 462 aa23.37■■□□□ 1.33
PPFIA3-212ENST00000602897 PTPN9P43378 593 aa23.37■■□□□ 1.33
PPFIA3-212ENST00000602897 SLC25A11Q02978 314 aaKnown RBP23.37■■□□□ 1.33
PPFIA3-212ENST00000602897 SIX1Q15475 284 aaPredicted RBP23.37■■□□□ 1.33
PPFIA3-212ENST00000602897 CCDC50Q8IVM0 306 aa23.37■■□□□ 1.33
PPFIA3-212ENST00000602897 KHSRPQ92945 711 aaKnown RBP eCLIP23.37■■□□□ 1.33
PPFIA3-212ENST00000602897 MAGOHBQ96A72 148 aaKnown RBP23.37■■□□□ 1.33
PPFIA3-212ENST00000602897 RTP3Q9BQQ7 232 aa23.37■■□□□ 1.33
PPFIA3-212ENST00000602897 FEZ2Q9UHY8 353 aaPredicted RBP23.37■■□□□ 1.33
PPFIA3-212ENST00000602897 MYBPHLA2RUH7 354 aa23.36■■□□□ 1.33
PPFIA3-212ENST00000602897 KRT1P04264 644 aa23.36■■□□□ 1.33
PPFIA3-212ENST00000602897 RB1P06400 928 aa23.36■■□□□ 1.33
PPFIA3-212ENST00000602897 GLI1P08151 1106 aa23.36■■□□□ 1.33
PPFIA3-212ENST00000602897 SDC4P31431 198 aa23.36■■□□□ 1.33
PPFIA3-212ENST00000602897 SMC1AQ14683 1233 aaKnown RBP23.36■■□□□ 1.33
PPFIA3-212ENST00000602897 CLEC20AQ6ZU45 233 aa23.36■■□□□ 1.33
PPFIA3-212ENST00000602897 FAM35AQ86V20 835 aa23.36■■□□□ 1.33
PPFIA3-212ENST00000602897 ARFGAP1Q8N6T3 406 aa23.36■■□□□ 1.33
PPFIA3-212ENST00000602897 SMARCD1Q96GM5 515 aa23.36■■□□□ 1.33
PPFIA3-212ENST00000602897 PCED1BQ96HM7 432 aa23.36■■□□□ 1.33
PPFIA3-212ENST00000602897 CASD1Q96PB1 797 aa23.36■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms