RNA–Protein interactions for RNA: ENST00000602557.5

CSMD1-216, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 11,740 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-216ENST00000602557 TDRKHQ9Y2W6 561 aaKnown RBP8.99□□□□□ -0.97
CSMD1-216ENST00000602557 PDXKO00764 312 aa8.99□□□□□ -0.97
CSMD1-216ENST00000602557 ADCK2Q7Z695 626 aa8.99□□□□□ -0.97
CSMD1-216ENST00000602557 C19orf60Q96EN9 201 aa8.99□□□□□ -0.97
CSMD1-216ENST00000602557 F5H6K3 240 aa8.99□□□□□ -0.97
CSMD1-216ENST00000602557 PDGFRBP09619 1106 aa8.99□□□□□ -0.97
CSMD1-216ENST00000602557 MYBL2P10244 700 aa8.99□□□□□ -0.97
CSMD1-216ENST00000602557 NELFEP18615 380 aaKnown RBP8.99□□□□□ -0.97
CSMD1-216ENST00000602557 KLRC3Q07444 240 aa8.99□□□□□ -0.97
CSMD1-216ENST00000602557 TWF1Q12792 350 aa8.99□□□□□ -0.97
CSMD1-216ENST00000602557 DGKKQ5KSL6 1271 aa8.99□□□□□ -0.97
CSMD1-216ENST00000602557 SIPA1Q96FS4 1042 aa8.99□□□□□ -0.97
CSMD1-216ENST00000602557 ZFYVE1Q9HBF4 777 aa8.99□□□□□ -0.97
CSMD1-216ENST00000602557 COMMD3-BMI1R4GMX3 469 aa8.99□□□□□ -0.97
CSMD1-216ENST00000602557 GLI1P08151 1106 aa8.99□□□□□ -0.97
CSMD1-216ENST00000602557 UCHL3P15374 230 aa8.99□□□□□ -0.97
CSMD1-216ENST00000602557 FEN1P39748 380 aaKnown RBP8.99□□□□□ -0.97
CSMD1-216ENST00000602557 LGALS3BPQ08380 585 aa8.99□□□□□ -0.97
CSMD1-216ENST00000602557 TTC23LQ6PF05 361 aa8.99□□□□□ -0.97
CSMD1-216ENST00000602557 CLEC10AQ8IUN9 316 aa8.99□□□□□ -0.97
CSMD1-216ENST00000602557 P3H2Q8IVL5 708 aa8.99□□□□□ -0.97
CSMD1-216ENST00000602557 KIAA1683Q9H0B3 1180 aa8.99□□□□□ -0.97
CSMD1-216ENST00000602557 TUFT1Q9NNX1 390 aa8.99□□□□□ -0.97
CSMD1-216ENST00000602557 ZNF222Q9UK12 451 aa8.99□□□□□ -0.97
CSMD1-216ENST00000602557 DOLKQ9UPQ8 538 aa8.99□□□□□ -0.97
CSMD1-216ENST00000602557 NDUFS3O75489 264 aa8.99□□□□□ -0.97
CSMD1-216ENST00000602557 HMGCS2P54868 508 aa8.99□□□□□ -0.97
CSMD1-216ENST00000602557 PARP8Q8N3A8 854 aa8.99□□□□□ -0.97
CSMD1-216ENST00000602557 PLEKHA8Q96JA3 519 aa8.99□□□□□ -0.97
CSMD1-216ENST00000602557 B3GALT6Q96L58 329 aa8.99□□□□□ -0.97
CSMD1-216ENST00000602557 CNGA2Q16280 664 aa8.99□□□□□ -0.97
CSMD1-216ENST00000602557 IPMKQ8NFU5 416 aa8.99□□□□□ -0.97
CSMD1-216ENST00000602557 TSPAN14Q8NG11 270 aa8.99□□□□□ -0.97
CSMD1-216ENST00000602557 KLHL32Q96NJ5 620 aa8.99□□□□□ -0.97
CSMD1-216ENST00000602557 SERPINB12Q96P63 405 aa8.99□□□□□ -0.97
CSMD1-216ENST00000602557 JMJD4Q9H9V9 463 aa8.99□□□□□ -0.97
CSMD1-216ENST00000602557 IL5RAQ01344 420 aa8.99□□□□□ -0.97
CSMD1-216ENST00000602557 ARHGEF26Q96DR7 871 aa8.99□□□□□ -0.97
CSMD1-216ENST00000602557 S100A1P23297 94 aa8.98□□□□□ -0.97
CSMD1-216ENST00000602557 YY1P25490 414 aa8.98□□□□□ -0.97
CSMD1-216ENST00000602557 SRP54P61011 504 aaKnown RBP8.98□□□□□ -0.97
CSMD1-216ENST00000602557 LSM3P62310 102 aaKnown RBP8.98□□□□□ -0.97
CSMD1-216ENST00000602557 GTF2H3Q13889 308 aa8.98□□□□□ -0.97
CSMD1-216ENST00000602557 CAMSAP1Q5T5Y3 1602 aa8.98□□□□□ -0.97
CSMD1-216ENST00000602557 SGMS1Q86VZ5 419 aa8.98□□□□□ -0.97
CSMD1-216ENST00000602557 SPATA2LQ8IUW3 424 aaPredicted RBP8.98□□□□□ -0.97
CSMD1-216ENST00000602557 TNIP3Q96KP6 325 aa8.98□□□□□ -0.97
CSMD1-216ENST00000602557 DYRK4Q9NR20 520 aa8.98□□□□□ -0.97
CSMD1-216ENST00000602557 ZSCAN5CA6NGD5 496 aaPredicted RBP8.98□□□□□ -0.97
CSMD1-216ENST00000602557 CLOCKO15516 846 aa8.98□□□□□ -0.97
CSMD1-216ENST00000602557 FAM20BO75063 409 aa8.98□□□□□ -0.97
CSMD1-216ENST00000602557 MYBP10242 640 aa8.98□□□□□ -0.97
CSMD1-216ENST00000602557 GEMIN4P57678 1058 aaKnown RBP8.98□□□□□ -0.97
CSMD1-216ENST00000602557 RAD51Q06609 339 aa8.98□□□□□ -0.97
CSMD1-216ENST00000602557 RAB42Q8N4Z0 105 aa8.98□□□□□ -0.97
CSMD1-216ENST00000602557 FOPNLQ96NB1 174 aa8.98□□□□□ -0.97
CSMD1-216ENST00000602557 MUC3BQ9H195 1237 aa8.98□□□□□ -0.97
CSMD1-216ENST00000602557 STAU2Q9NUL3 570 aaKnown RBP eCLIP8.98□□□□□ -0.97
CSMD1-216ENST00000602557 A2ML1A8K2U0 1454 aa8.98□□□□□ -0.97
CSMD1-216ENST00000602557 ADSLP30566 484 aaPredicted RBP8.98□□□□□ -0.97
CSMD1-216ENST00000602557 USP10Q14694 798 aaKnown RBP8.98□□□□□ -0.97
CSMD1-216ENST00000602557 MTHFD1LQ6UB35 978 aa8.98□□□□□ -0.97
CSMD1-216ENST00000602557 ADSSL1Q8N142 457 aa8.98□□□□□ -0.97
CSMD1-216ENST00000602557 POLG2Q9UHN1 485 aa8.98□□□□□ -0.97
CSMD1-216ENST00000602557 KRT87PA6NCN2 255 aa8.98□□□□□ -0.97
CSMD1-216ENST00000602557 DGUOKQ16854 277 aa8.98□□□□□ -0.97
CSMD1-216ENST00000602557 DENND6AQ8IWF6 608 aa8.98□□□□□ -0.97
CSMD1-216ENST00000602557 ZNF624Q9P2J8 865 aaPredicted RBP8.98□□□□□ -0.97
CSMD1-216ENST00000602557 UVRAGQ9P2Y5 699 aa8.98□□□□□ -0.97
CSMD1-216ENST00000602557 FCHO1O14526 889 aa8.98□□□□□ -0.97
CSMD1-216ENST00000602557 AP5Z1O43299 807 aa8.98□□□□□ -0.97
CSMD1-216ENST00000602557 NUP62P37198 522 aaPredicted RBP8.98□□□□□ -0.97
CSMD1-216ENST00000602557 NAA20P61599 178 aa8.98□□□□□ -0.97
CSMD1-216ENST00000602557 ERVK-24P63145 666 aa8.98□□□□□ -0.97
CSMD1-216ENST00000602557 NRF1Q16656 503 aa8.98□□□□□ -0.97
CSMD1-216ENST00000602557 C16orf62Q7Z3J2 963 aa8.98□□□□□ -0.97
CSMD1-216ENST00000602557 HMG20AQ9NP66 347 aa8.98□□□□□ -0.97
CSMD1-216ENST00000602557 BTBD3Q9Y2F9 522 aa8.98□□□□□ -0.97
CSMD1-216ENST00000602557 MED14O60244 1454 aa8.98□□□□□ -0.97
CSMD1-216ENST00000602557 ALKQ9UM73 1620 aa8.98□□□□□ -0.97
CSMD1-216ENST00000602557 SRGNP10124 158 aa8.98□□□□□ -0.97
CSMD1-216ENST00000602557 PDGFRAP16234 1089 aa8.98□□□□□ -0.97
CSMD1-216ENST00000602557 VEPH1Q14D04 833 aa8.98□□□□□ -0.97
CSMD1-216ENST00000602557 SEPT12Q8IYM1 358 aa8.98□□□□□ -0.97
CSMD1-216ENST00000602557 RDM1Q8NG50 284 aa8.98□□□□□ -0.97
CSMD1-216ENST00000602557 PRRC2BQ5JSZ5 2229 aaKnown RBP8.98□□□□□ -0.97
CSMD1-216ENST00000602557 PALM2-AKAP2B1ALY0 433 aaPredicted RBP8.98□□□□□ -0.97
CSMD1-216ENST00000602557 AVPR1AP37288 418 aa8.98□□□□□ -0.97
CSMD1-216ENST00000602557 KYAT1Q16773 422 aa8.98□□□□□ -0.97
CSMD1-216ENST00000602557 EPC2Q52LR7 807 aa8.98□□□□□ -0.97
CSMD1-216ENST00000602557 RSL24D1Q9UHA3 163 aaKnown RBP8.98□□□□□ -0.97
CSMD1-216ENST00000602557 CHORDC1Q9UHD1 332 aaPredicted RBP8.98□□□□□ -0.97
CSMD1-216ENST00000602557 WBP11Q9Y2W2 641 aaKnown RBP8.98□□□□□ -0.97
CSMD1-216ENST00000602557 DPPA5A6NC42 116 aa8.98□□□□□ -0.97
CSMD1-216ENST00000602557 PTGES3LE9PB15 166 aa8.98□□□□□ -0.97
CSMD1-216ENST00000602557 FOXP2O15409 715 aa8.98□□□□□ -0.97
CSMD1-216ENST00000602557 CNOT3O75175 753 aaKnown RBP8.98□□□□□ -0.97
CSMD1-216ENST00000602557 COMTP21964 271 aa8.98□□□□□ -0.97
CSMD1-216ENST00000602557 AP3M2P53677 418 aa8.98□□□□□ -0.97
CSMD1-216ENST00000602557 ZNF844Q08AG5 666 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms