RNA–Protein interactions for RNA: ENST00000602421.5

MACF1-233, Transcript of microtubule-actin crosslinking factor 1, human

TSL 2 BASIC

Gene MACF1, Length 1,423 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MACF1-233	ENST00000602421	DAB2IP	Q5VWQ8	1189 aa		18.81	■□□□□ 0.6
MACF1-233	ENST00000602421	ATAD1	Q8NBU5	361 aa		18.81	■□□□□ 0.6
MACF1-233	ENST00000602421	ACTRT1	Q8TDG2	376 aa		18.81	■□□□□ 0.6
MACF1-233	ENST00000602421	NDRG1	Q92597	394 aa	Known RBP	18.81	■□□□□ 0.6
MACF1-233	ENST00000602421	PLVAP	Q9BX97	442 aa		18.81	■□□□□ 0.6
MACF1-233	ENST00000602421	FASTKD2	Q9NYY8	710 aa	Known RBP eCLIP	18.81	■□□□□ 0.6
MACF1-233	ENST00000602421	PDE2A	O00408	941 aa	Predicted RBP	18.8	■□□□□ 0.6
MACF1-233	ENST00000602421	UROD	P06132	367 aa		18.8	■□□□□ 0.6
MACF1-233	ENST00000602421	USP17L7	P0C7H9	530 aa		18.8	■□□□□ 0.6
MACF1-233	ENST00000602421	GJC1	P36383	396 aa		18.8	■□□□□ 0.6
MACF1-233	ENST00000602421	YWHAZ	P63104	245 aa	Known RBP	18.8	■□□□□ 0.6
MACF1-233	ENST00000602421	ZNF211	Q13398	564 aa	Predicted RBP	18.8	■□□□□ 0.6
MACF1-233	ENST00000602421	CCDC14	Q49A88	953 aa		18.8	■□□□□ 0.6
MACF1-233	ENST00000602421	DCAF12L1	Q5VU92	463 aa		18.8	■□□□□ 0.6
MACF1-233	ENST00000602421	SLC8B1	Q6J4K2	584 aa		18.8	■□□□□ 0.6
MACF1-233	ENST00000602421	TRNP1	Q6NT89	227 aa		18.8	■□□□□ 0.6
MACF1-233	ENST00000602421	RNF19B	Q6ZMZ0	732 aa		18.8	■□□□□ 0.6
MACF1-233	ENST00000602421	VPS52	Q8N1B4	723 aa		18.8	■□□□□ 0.6
MACF1-233	ENST00000602421	RASGEF1C	Q8N431	466 aa		18.8	■□□□□ 0.6
MACF1-233	ENST00000602421	LRRN4CL	Q8ND94	238 aa		18.8	■□□□□ 0.6
MACF1-233	ENST00000602421	CLP1	Q92989	425 aa	Known RBP	18.8	■□□□□ 0.6
MACF1-233	ENST00000602421	RPGRIP1	Q96KN7	1286 aa		18.8	■□□□□ 0.6
MACF1-233	ENST00000602421	C8orf48	Q96LL4	319 aa		18.8	■□□□□ 0.6
MACF1-233	ENST00000602421	NCAPG	Q9BPX3	1015 aa		18.8	■□□□□ 0.6
MACF1-233	ENST00000602421	SMARCAL1	Q9NZC9	954 aa		18.8	■□□□□ 0.6
MACF1-233	ENST00000602421	EHD2	Q9NZN4	543 aa		18.8	■□□□□ 0.6
MACF1-233	ENST00000602421	NR2E3	Q9Y5X4	410 aa		18.8	■□□□□ 0.6
MACF1-233	ENST00000602421	PGRMC1	O00264	195 aa	Known RBP	18.79	■□□□□ 0.6
MACF1-233	ENST00000602421	LRCH4	O75427	683 aa		18.79	■□□□□ 0.6
MACF1-233	ENST00000602421	DAB1	O75553	588 aa		18.79	■□□□□ 0.6
MACF1-233	ENST00000602421	FGF18	O76093	207 aa		18.79	■□□□□ 0.6
MACF1-233	ENST00000602421	RPL17	P18621	184 aa	Known RBP	18.79	■□□□□ 0.6
MACF1-233	ENST00000602421	OR1D2	P34982	312 aa		18.79	■□□□□ 0.6
MACF1-233	ENST00000602421	CLUL1	Q15846	466 aa		18.79	■□□□□ 0.6
MACF1-233	ENST00000602421	ZFYVE27	Q5T4F4	411 aa		18.79	■□□□□ 0.6
MACF1-233	ENST00000602421	COL13A1	Q5TAT6	717 aa	Predicted RBP	18.79	■□□□□ 0.6
MACF1-233	ENST00000602421	SCML4	Q8N228	414 aa		18.79	■□□□□ 0.6
MACF1-233	ENST00000602421	SP7	Q8TDD2	431 aa	Predicted RBP	18.79	■□□□□ 0.6
MACF1-233	ENST00000602421	IRGQ	Q8WZA9	623 aa		18.79	■□□□□ 0.6
MACF1-233	ENST00000602421	GOLGA1	Q92805	767 aa		18.79	■□□□□ 0.6
MACF1-233	ENST00000602421	RNPC3	Q96LT9	517 aa	Known RBP	18.79	■□□□□ 0.6
MACF1-233	ENST00000602421	CFAP57	Q96MR6	1250 aa		18.79	■□□□□ 0.6
MACF1-233	ENST00000602421	DDX23	Q9BUQ8	820 aa	Known RBP	18.79	■□□□□ 0.6
MACF1-233	ENST00000602421	EFCAB8	A8MWE9	144 aa		18.78	■□□□□ 0.6
MACF1-233	ENST00000602421	ADAM12	O43184	909 aa		18.78	■□□□□ 0.6
MACF1-233	ENST00000602421	TADA3	O75528	432 aa		18.78	■□□□□ 0.6
MACF1-233	ENST00000602421	KRT7	P08729	469 aa		18.78	■□□□□ 0.6
MACF1-233	ENST00000602421	PYGM	P11217	842 aa		18.78	■□□□□ 0.6
MACF1-233	ENST00000602421	PCK1	P35558	622 aa		18.78	■□□□□ 0.6
MACF1-233	ENST00000602421	MATK	P42679	507 aa		18.78	■□□□□ 0.6
MACF1-233	ENST00000602421	PTPN9	P43378	593 aa		18.78	■□□□□ 0.6
MACF1-233	ENST00000602421	SLC5A3	P53794	718 aa		18.78	■□□□□ 0.6
MACF1-233	ENST00000602421	ATP11A	P98196	1134 aa		18.78	■□□□□ 0.6
MACF1-233	ENST00000602421	ROR1	Q01973	937 aa		18.78	■□□□□ 0.6
MACF1-233	ENST00000602421	DDR2	Q16832	855 aa		18.78	■□□□□ 0.6
MACF1-233	ENST00000602421	CDO1	Q16878	200 aa		18.78	■□□□□ 0.6
MACF1-233	ENST00000602421	C15orf59	Q2T9L4	293 aa	Predicted RBP	18.78	■□□□□ 0.6
MACF1-233	ENST00000602421	MGAT5B	Q3V5L5	792 aa		18.78	■□□□□ 0.6
MACF1-233	ENST00000602421	RASIP1	Q5U651	963 aa		18.78	■□□□□ 0.6
MACF1-233	ENST00000602421	PM20D1	Q6GTS8	502 aa		18.78	■□□□□ 0.6
MACF1-233	ENST00000602421	ZNF572	Q7Z3I7	529 aa	Predicted RBP	18.78	■□□□□ 0.6
MACF1-233	ENST00000602421	KATNAL2	Q8IYT4	538 aa		18.78	■□□□□ 0.6
MACF1-233	ENST00000602421	DEFB106A	Q8N104	65 aa		18.78	■□□□□ 0.6
MACF1-233	ENST00000602421	ARFGAP1	Q8N6T3	406 aa		18.78	■□□□□ 0.6
MACF1-233	ENST00000602421	NAP1L3	Q99457	506 aa	Predicted RBP	18.78	■□□□□ 0.6
MACF1-233	ENST00000602421	POPDC2	Q9HBU9	364 aa		18.78	■□□□□ 0.6
MACF1-233	ENST00000602421	NGRN	Q9NPE2	291 aa	Known RBP	18.78	■□□□□ 0.6
MACF1-233	ENST00000602421	DDX56	Q9NY93	547 aa	Known RBP	18.78	■□□□□ 0.6
MACF1-233	ENST00000602421	TTC7A	Q9ULT0	858 aa	Predicted RBP	18.78	■□□□□ 0.6
MACF1-233	ENST00000602421	SLC27A5	Q9Y2P5	690 aa		18.78	■□□□□ 0.6
MACF1-233	ENST00000602421	USP3	Q9Y6I4	520 aa		18.78	■□□□□ 0.6
MACF1-233	ENST00000602421	MKI67	P46013	3256 aa	Known RBP	18.78	■□□□□ 0.6
MACF1-233	ENST00000602421	PTPRS	Q13332	1948 aa		18.77	■□□□□ 0.6
MACF1-233	ENST00000602421	UQCRHL	A0A096LP55	91 aa		18.77	■□□□□ 0.6
MACF1-233	ENST00000602421	WDR27	A2RRH5	827 aa		18.77	■□□□□ 0.6
MACF1-233	ENST00000602421	YJEFN3	A6XGL0	299 aa		18.77	■□□□□ 0.6
MACF1-233	ENST00000602421		E7ENQ6	273 aa		18.77	■□□□□ 0.6
MACF1-233	ENST00000602421	TNFRSF10B	O14763	440 aa		18.77	■□□□□ 0.6
MACF1-233	ENST00000602421	CAPN9	O14815	690 aa		18.77	■□□□□ 0.6
MACF1-233	ENST00000602421	LTF	P02788	710 aa		18.77	■□□□□ 0.6
MACF1-233	ENST00000602421	UQCRH	P07919	91 aa		18.77	■□□□□ 0.6
MACF1-233	ENST00000602421	LINC00271	P0C7V0	271 aa		18.77	■□□□□ 0.6
MACF1-233	ENST00000602421	HAPLN1	P10915	354 aa	Predicted RBP	18.77	■□□□□ 0.6
MACF1-233	ENST00000602421	TCF4	P15884	667 aa		18.77	■□□□□ 0.6
MACF1-233	ENST00000602421	MIP	P30301	263 aa		18.77	■□□□□ 0.6
MACF1-233	ENST00000602421	NOS2	P35228	1153 aa		18.77	■□□□□ 0.6
MACF1-233	ENST00000602421	LONRF2	Q1L5Z9	754 aa		18.77	■□□□□ 0.6
MACF1-233	ENST00000602421	ODF2	Q5BJF6	829 aa		18.77	■□□□□ 0.6
MACF1-233	ENST00000602421	HFE2	Q6ZVN8	426 aa		18.77	■□□□□ 0.6
MACF1-233	ENST00000602421	POLN	Q7Z5Q5	900 aa		18.77	■□□□□ 0.6
MACF1-233	ENST00000602421	NUP93	Q8N1F7	819 aa		18.77	■□□□□ 0.6
MACF1-233	ENST00000602421	TTC9B	Q8N6N2	239 aa		18.77	■□□□□ 0.6
MACF1-233	ENST00000602421	FAM172A	Q8WUF8	416 aa		18.77	■□□□□ 0.6
MACF1-233	ENST00000602421	SLC2A13	Q96QE2	648 aa		18.77	■□□□□ 0.6
MACF1-233	ENST00000602421	SEPT5	Q99719	369 aa	Predicted RBP	18.77	■□□□□ 0.6
MACF1-233	ENST00000602421	CLSTN3	Q9BQT9	956 aa		18.77	■□□□□ 0.6
MACF1-233	ENST00000602421	ZWILCH	Q9H900	591 aa		18.77	■□□□□ 0.6
MACF1-233	ENST00000602421	MRPL17	Q9NRX2	175 aa	Known RBP	18.77	■□□□□ 0.6
MACF1-233	ENST00000602421	PCSK1N	Q9UHG2	260 aa		18.77	■□□□□ 0.6
MACF1-233	ENST00000602421	STAP1	Q9ULZ2	295 aa		18.77	■□□□□ 0.6

Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms