RNA–Protein interactions for RNA: ENST00000600804.1

CHMP2A-207, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 2

Gene CHMP2A, Length 592 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-207ENST00000600804 ELF1P32519 619 aa12.29□□□□□ -0.44
CHMP2A-207ENST00000600804 ARPP19P56211 112 aa12.29□□□□□ -0.44
CHMP2A-207ENST00000600804 DUSP4Q13115 394 aa12.29□□□□□ -0.44
CHMP2A-207ENST00000600804 PLD1Q13393 1074 aa12.29□□□□□ -0.44
CHMP2A-207ENST00000600804 GOLGA7BQ2TAP0 167 aa12.29□□□□□ -0.44
CHMP2A-207ENST00000600804 CYP26C1Q6V0L0 522 aa12.29□□□□□ -0.44
CHMP2A-207ENST00000600804 CLEC20AQ6ZU45 233 aa12.29□□□□□ -0.44
CHMP2A-207ENST00000600804 CCDC186Q7Z3E2 898 aa12.29□□□□□ -0.44
CHMP2A-207ENST00000600804 TMEM35BQ8NCS4 154 aa12.29□□□□□ -0.44
CHMP2A-207ENST00000600804 ZMIZ2Q8NF64 920 aa12.29□□□□□ -0.44
CHMP2A-207ENST00000600804 SLC20A1Q8WUM9 679 aa12.29□□□□□ -0.44
CHMP2A-207ENST00000600804 RSAD2Q8WXG1 361 aa12.29□□□□□ -0.44
CHMP2A-207ENST00000600804 KCTD13Q8WZ19 329 aa12.29□□□□□ -0.44
CHMP2A-207ENST00000600804 NKD2Q969F2 451 aaPredicted RBP12.29□□□□□ -0.44
CHMP2A-207ENST00000600804 SMOQ99835 787 aa12.29□□□□□ -0.44
CHMP2A-207ENST00000600804 LPIN3Q9BQK8 851 aa12.29□□□□□ -0.44
CHMP2A-207ENST00000600804 CRISPLD1Q9H336 500 aa12.29□□□□□ -0.44
CHMP2A-207ENST00000600804 KRT82Q9NSB4 513 aa12.29□□□□□ -0.44
CHMP2A-207ENST00000600804 COMMD8Q9NX08 183 aa12.29□□□□□ -0.44
CHMP2A-207ENST00000600804 ABI2Q9NYB9 513 aaPredicted RBP12.29□□□□□ -0.44
CHMP2A-207ENST00000600804 IL37Q9NZH6 218 aa12.29□□□□□ -0.44
CHMP2A-207ENST00000600804 NENFQ9UMX5 172 aa12.29□□□□□ -0.44
CHMP2A-207ENST00000600804 ASB3Q9Y575 518 aa12.29□□□□□ -0.44
CHMP2A-207ENST00000600804 KRBA1A5PL33 1030 aa12.28□□□□□ -0.44
CHMP2A-207ENST00000600804 HHLA1C9JL84 531 aa12.28□□□□□ -0.44
CHMP2A-207ENST00000600804 M0QYV0 167 aa12.28□□□□□ -0.44
CHMP2A-207ENST00000600804 CLDN5O00501 218 aa12.28□□□□□ -0.44
CHMP2A-207ENST00000600804 SEC24AO95486 1093 aa12.28□□□□□ -0.44
CHMP2A-207ENST00000600804 MMEP08473 750 aa12.28□□□□□ -0.44
CHMP2A-207ENST00000600804 HNRNPA1P09651 372 aaKnown RBP eCLIP12.28□□□□□ -0.44
CHMP2A-207ENST00000600804 UNGP13051 313 aaPredicted RBP12.28□□□□□ -0.44
CHMP2A-207ENST00000600804 TNFAIP3P21580 790 aa12.28□□□□□ -0.44
CHMP2A-207ENST00000600804 ADORA2BP29275 332 aa12.28□□□□□ -0.44
CHMP2A-207ENST00000600804 NOMO3P69849 1222 aa12.28□□□□□ -0.44
CHMP2A-207ENST00000600804 FOXK2Q01167 660 aa12.28□□□□□ -0.44
CHMP2A-207ENST00000600804 CENPCQ03188 943 aa12.28□□□□□ -0.44
CHMP2A-207ENST00000600804 PDE4CQ08493 712 aa12.28□□□□□ -0.44
CHMP2A-207ENST00000600804 GOLGA8FQ08AF8 430 aa12.28□□□□□ -0.44
CHMP2A-207ENST00000600804 GOLGA8DPQ0D2H9 430 aa12.28□□□□□ -0.44
CHMP2A-207ENST00000600804 TDGQ13569 410 aa12.28□□□□□ -0.44
CHMP2A-207ENST00000600804 ANGPT1Q15389 498 aa12.28□□□□□ -0.44
CHMP2A-207ENST00000600804 SLC18A3Q16572 532 aa12.28□□□□□ -0.44
CHMP2A-207ENST00000600804 TDRD12Q587J7 1177 aaKnown RBP12.28□□□□□ -0.44
CHMP2A-207ENST00000600804 RAB41Q5JT25 222 aa12.28□□□□□ -0.44
CHMP2A-207ENST00000600804 PALB2Q86YC2 1186 aa12.28□□□□□ -0.44
CHMP2A-207ENST00000600804 TMEM139Q8IV31 216 aa12.28□□□□□ -0.44
CHMP2A-207ENST00000600804 SCML4Q8N228 414 aa12.28□□□□□ -0.44
CHMP2A-207ENST00000600804 PLCD3Q8N3E9 789 aa12.28□□□□□ -0.44
CHMP2A-207ENST00000600804 WDTC1Q8N5D0 677 aa12.28□□□□□ -0.44
CHMP2A-207ENST00000600804 CMASQ8NFW8 434 aaPredicted RBP12.28□□□□□ -0.44
CHMP2A-207ENST00000600804 VCPIP1Q96JH7 1222 aa12.28□□□□□ -0.44
CHMP2A-207ENST00000600804 PGLYRP2Q96PD5 576 aa12.28□□□□□ -0.44
CHMP2A-207ENST00000600804 NOX5Q96PH1 765 aa12.28□□□□□ -0.44
CHMP2A-207ENST00000600804 BAG1Q99933 345 aaPredicted RBP12.28□□□□□ -0.44
CHMP2A-207ENST00000600804 MED10Q9BTT4 135 aa12.28□□□□□ -0.44
CHMP2A-207ENST00000600804 SLC4A5Q9BY07 1137 aa12.28□□□□□ -0.44
CHMP2A-207ENST00000600804 MIS12Q9H081 205 aa12.28□□□□□ -0.44
CHMP2A-207ENST00000600804 MFSD1Q9H3U5 465 aa12.28□□□□□ -0.44
CHMP2A-207ENST00000600804 SFXN1Q9H9B4 322 aa12.28□□□□□ -0.44
CHMP2A-207ENST00000600804 NHEJ1Q9H9Q4 299 aaPredicted RBP12.28□□□□□ -0.44
CHMP2A-207ENST00000600804 CYP4F11Q9HBI6 524 aa12.28□□□□□ -0.44
CHMP2A-207ENST00000600804 TMEM30AQ9NV96 361 aa12.28□□□□□ -0.44
CHMP2A-207ENST00000600804 ZDHHC7Q9NXF8 308 aa12.28□□□□□ -0.44
CHMP2A-207ENST00000600804 YIPF1Q9Y548 306 aa12.28□□□□□ -0.44
CHMP2A-207ENST00000600804 INSL5Q9Y5Q6 135 aa12.28□□□□□ -0.44
CHMP2A-207ENST00000600804 CACNA1BQ00975 2339 aa12.28□□□□□ -0.44
CHMP2A-207ENST00000600804 ZFHX4Q86UP3 3567 aa12.28□□□□□ -0.44
CHMP2A-207ENST00000600804 FAM92AA1XBS5 289 aa12.27□□□□□ -0.45
CHMP2A-207ENST00000600804 F8VP50 259 aa12.27□□□□□ -0.45
CHMP2A-207ENST00000600804 DDX3XO00571 662 aaKnown RBP eCLIP12.27□□□□□ -0.452e-8■■■■■ 32.9
CHMP2A-207ENST00000600804 TNFRSF10BO14763 440 aa12.27□□□□□ -0.45
CHMP2A-207ENST00000600804 ZMYND10O75800 440 aa12.27□□□□□ -0.45
CHMP2A-207ENST00000600804 LCA5LO95447 670 aa12.27□□□□□ -0.45
CHMP2A-207ENST00000600804 CALCAP01258 141 aa12.27□□□□□ -0.45
CHMP2A-207ENST00000600804 C8AP07357 584 aa12.27□□□□□ -0.45
CHMP2A-207ENST00000600804 SKILP12757 684 aa12.27□□□□□ -0.45
CHMP2A-207ENST00000600804 ACADSBP45954 432 aa12.27□□□□□ -0.45
CHMP2A-207ENST00000600804 GABRB2P47870 512 aa12.27□□□□□ -0.45
CHMP2A-207ENST00000600804 CACNA2D1P54289 1103 aa12.27□□□□□ -0.45
CHMP2A-207ENST00000600804 GSCP56915 257 aaPredicted RBP12.27□□□□□ -0.45
CHMP2A-207ENST00000600804 SNX16P57768 344 aa12.27□□□□□ -0.45
CHMP2A-207ENST00000600804 CLEC16AQ2KHT3 1053 aa12.27□□□□□ -0.45
CHMP2A-207ENST00000600804 LIN9Q5TKA1 542 aa12.27□□□□□ -0.45
CHMP2A-207ENST00000600804 TAF3Q5VWG9 929 aa12.27□□□□□ -0.45
CHMP2A-207ENST00000600804 DENND1BQ6P3S1 775 aa12.27□□□□□ -0.45
CHMP2A-207ENST00000600804 TMEM110Q86TL2 294 aa12.27□□□□□ -0.45
CHMP2A-207ENST00000600804 PIGZQ86VD9 579 aa12.27□□□□□ -0.45
CHMP2A-207ENST00000600804 PHF13Q86YI8 300 aaPredicted RBP12.27□□□□□ -0.45
CHMP2A-207ENST00000600804 GLYCTKQ8IVS8 523 aa12.27□□□□□ -0.45
CHMP2A-207ENST00000600804 LRRC8AQ8IWT6 810 aa12.27□□□□□ -0.45
CHMP2A-207ENST00000600804 SIX5Q8N196 739 aa12.27□□□□□ -0.45
CHMP2A-207ENST00000600804 DTWD2Q8NBA8 298 aa12.27□□□□□ -0.45
CHMP2A-207ENST00000600804 SECISBP2LQ93073 1101 aaKnown RBP12.27□□□□□ -0.45
CHMP2A-207ENST00000600804 MYRFLQ96LU7 910 aa12.27□□□□□ -0.45
CHMP2A-207ENST00000600804 CCDC42Q96M95 316 aa12.27□□□□□ -0.45
CHMP2A-207ENST00000600804 PCDHB18PQ96TA0 734 aa12.27□□□□□ -0.45
CHMP2A-207ENST00000600804 CHP1Q99653 195 aa12.27□□□□□ -0.45
CHMP2A-207ENST00000600804 TTLL2Q9BWV7 592 aa12.27□□□□□ -0.45
CHMP2A-207ENST00000600804 PDCL3Q9H2J4 239 aa12.27□□□□□ -0.45
CHMP2A-207ENST00000600804 EHD2Q9NZN4 543 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms