RNA–Protein interactions for RNA: ENST00000600320.5

SHKBP1-222, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 913 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-222ENST00000600320 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP21.07■□□□□ 0.96
SHKBP1-222ENST00000600320 COMMD8Q9NX08 183 aa21.07■□□□□ 0.96
SHKBP1-222ENST00000600320 GMIPQ9P107 970 aa21.07■□□□□ 0.96
SHKBP1-222ENST00000600320 ADAMTS1Q9UHI8 967 aa21.07■□□□□ 0.96
SHKBP1-222ENST00000600320 USP15Q9Y4E8 981 aaPredicted RBP21.07■□□□□ 0.96
SHKBP1-222ENST00000600320 ZNF638Q14966 1978 aaKnown RBP21.06■□□□□ 0.96
SHKBP1-222ENST00000600320 A0A087X0T9 212 aa21.06■□□□□ 0.96
SHKBP1-222ENST00000600320 SSU72P8A0A1W2PR75 194 aa21.06■□□□□ 0.96
SHKBP1-222ENST00000600320 TMCO5BA8MYB1 307 aa21.06■□□□□ 0.96
SHKBP1-222ENST00000600320 PAPSS1O43252 624 aaPredicted RBP21.06■□□□□ 0.96
SHKBP1-222ENST00000600320 FAM228BP0C875 321 aa21.06■□□□□ 0.96
SHKBP1-222ENST00000600320 GABRR2P28476 465 aa21.06■□□□□ 0.96
SHKBP1-222ENST00000600320 ACADSBP45954 432 aa21.06■□□□□ 0.96
SHKBP1-222ENST00000600320 CENPCQ03188 943 aa21.06■□□□□ 0.96
SHKBP1-222ENST00000600320 PTP4A2Q12974 167 aa21.06■□□□□ 0.96
SHKBP1-222ENST00000600320 ATAT1Q5SQI0 421 aa21.06■□□□□ 0.96
SHKBP1-222ENST00000600320 ACAD10Q6JQN1 1059 aa21.06■□□□□ 0.96
SHKBP1-222ENST00000600320 GAREM2Q75VX8 874 aa21.06■□□□□ 0.96
SHKBP1-222ENST00000600320 PDZD4Q76G19 769 aaPredicted RBP21.06■□□□□ 0.96
SHKBP1-222ENST00000600320 ITFG1Q8TB96 612 aa21.06■□□□□ 0.96
SHKBP1-222ENST00000600320 SHKBP1Q8TBC3 707 aa21.06■□□□□ 0.96
SHKBP1-222ENST00000600320 SUSD6Q92537 303 aa21.06■□□□□ 0.96
SHKBP1-222ENST00000600320 MIS12Q9H081 205 aa21.06■□□□□ 0.96
SHKBP1-222ENST00000600320 NHEJ1Q9H9Q4 299 aaPredicted RBP21.06■□□□□ 0.96
SHKBP1-222ENST00000600320 WDR6Q9NNW5 1121 aaKnown RBP21.06■□□□□ 0.96
SHKBP1-222ENST00000600320 CYLDQ9NQC7 956 aa21.06■□□□□ 0.96
SHKBP1-222ENST00000600320 NENFQ9UMX5 172 aa21.06■□□□□ 0.96
SHKBP1-222ENST00000600320 COG5Q9UP83 839 aa21.06■□□□□ 0.96
SHKBP1-222ENST00000600320 SCML2Q9UQR0 700 aa21.06■□□□□ 0.96
SHKBP1-222ENST00000600320 MYO16Q9Y6X6 1858 aa21.05■□□□□ 0.96
SHKBP1-222ENST00000600320 A0A1W2PRU2 124 aa21.05■□□□□ 0.96
SHKBP1-222ENST00000600320 MBTPS2O43462 519 aa21.05■□□□□ 0.96
SHKBP1-222ENST00000600320 MMP8P22894 467 aa21.05■□□□□ 0.96
SHKBP1-222ENST00000600320 DAOAP59103 153 aa21.05■□□□□ 0.96
SHKBP1-222ENST00000600320 SMAD4Q13485 552 aaKnown RBP21.05■□□□□ 0.96
SHKBP1-222ENST00000600320 CYP4A22Q5TCH4 519 aa21.05■□□□□ 0.96
SHKBP1-222ENST00000600320 PM20D1Q6GTS8 502 aa21.05■□□□□ 0.96
SHKBP1-222ENST00000600320 POTEHQ6S545 545 aa21.05■□□□□ 0.96
SHKBP1-222ENST00000600320 MMS22LQ6ZRQ5 1243 aa21.05■□□□□ 0.96
SHKBP1-222ENST00000600320 SCD5Q86SK9 330 aa21.05■□□□□ 0.96
SHKBP1-222ENST00000600320 ERICH1Q86X53 443 aa21.05■□□□□ 0.96
SHKBP1-222ENST00000600320 PHF13Q86YI8 300 aaPredicted RBP21.05■□□□□ 0.96
SHKBP1-222ENST00000600320 TMEM139Q8IV31 216 aa21.05■□□□□ 0.96
SHKBP1-222ENST00000600320 SIX6OS1Q8N1H7 587 aa21.05■□□□□ 0.96
SHKBP1-222ENST00000600320 GADD45GIP1Q8TAE8 222 aaPredicted RBP21.05■□□□□ 0.96
SHKBP1-222ENST00000600320 PIWIL1Q96J94 861 aaKnown RBP21.05■□□□□ 0.96
SHKBP1-222ENST00000600320 PDLIM2Q96JY6 352 aa21.05■□□□□ 0.96
SHKBP1-222ENST00000600320 NOX5Q96PH1 765 aa21.05■□□□□ 0.96
SHKBP1-222ENST00000600320 C11orf70Q9BRQ4 267 aa21.05■□□□□ 0.96
SHKBP1-222ENST00000600320 FBXO44Q9H4M3 255 aa21.05■□□□□ 0.96
SHKBP1-222ENST00000600320 POMKQ9H5K3 350 aa21.05■□□□□ 0.96
SHKBP1-222ENST00000600320 NMUR1Q9HB89 426 aa21.05■□□□□ 0.96
SHKBP1-222ENST00000600320 AVENQ9NQS1 362 aaPredicted RBP21.05■□□□□ 0.96
SHKBP1-222ENST00000600320 CNGB3Q9NQW8 809 aa21.05■□□□□ 0.96
SHKBP1-222ENST00000600320 UXTQ9UBK9 157 aaPredicted RBP21.05■□□□□ 0.96
SHKBP1-222ENST00000600320 CHORDC1Q9UHD1 332 aaPredicted RBP21.05■□□□□ 0.96
SHKBP1-222ENST00000600320 A0A0C4DFX4 3053 aa21.05■□□□□ 0.96
SHKBP1-222ENST00000600320 CLUHO75153 1309 aa21.04■□□□□ 0.96
SHKBP1-222ENST00000600320 GOLGA6L6A8MZA4 724 aa21.04■□□□□ 0.96
SHKBP1-222ENST00000600320 ZBED1O96006 694 aa21.04■□□□□ 0.96
SHKBP1-222ENST00000600320 MTHFRP42898 656 aa21.04■□□□□ 0.96
SHKBP1-222ENST00000600320 GSDMDP57764 484 aa21.04■□□□□ 0.96
SHKBP1-222ENST00000600320 CYP4F8P98187 520 aa21.04■□□□□ 0.96
SHKBP1-222ENST00000600320 TFF2Q03403 129 aa21.04■□□□□ 0.96
SHKBP1-222ENST00000600320 GFPT1Q06210 699 aaPredicted RBP21.04■□□□□ 0.96
SHKBP1-222ENST00000600320 LEXMQ3ZCV2 418 aa21.04■□□□□ 0.96
SHKBP1-222ENST00000600320 HFE2Q6ZVN8 426 aa21.04■□□□□ 0.96
SHKBP1-222ENST00000600320 FAM183BPQ6ZVS7 135 aa21.04■□□□□ 0.96
SHKBP1-222ENST00000600320 SCUBE3Q8IX30 993 aa21.04■□□□□ 0.96
SHKBP1-222ENST00000600320 SCML4Q8N228 414 aa21.04■□□□□ 0.96
SHKBP1-222ENST00000600320 LEMD2Q8NC56 503 aa21.04■□□□□ 0.96
SHKBP1-222ENST00000600320 IPO4Q8TEX9 1081 aaKnown RBP21.04■□□□□ 0.96
SHKBP1-222ENST00000600320 RIPOR3Q96MK2 946 aa21.04■□□□□ 0.96
SHKBP1-222ENST00000600320 SLITRK1Q96PX8 696 aa21.04■□□□□ 0.96
SHKBP1-222ENST00000600320 EHD2Q9NZN4 543 aa21.04■□□□□ 0.96
SHKBP1-222ENST00000600320 OBSL1O75147 1896 aa21.03■□□□□ 0.96
SHKBP1-222ENST00000600320 A0A1W2PQH9 124 aa21.03■□□□□ 0.96
SHKBP1-222ENST00000600320 ZDHHC11BP0C7U3 371 aa21.03■□□□□ 0.96
SHKBP1-222ENST00000600320 CEBPBP17676 345 aa21.03■□□□□ 0.96
SHKBP1-222ENST00000600320 FSHRP23945 695 aa21.03■□□□□ 0.96
SHKBP1-222ENST00000600320 NSFP46459 744 aaKnown RBP21.03■□□□□ 0.96
SHKBP1-222ENST00000600320 GABRB2P47870 512 aa21.03■□□□□ 0.96
SHKBP1-222ENST00000600320 MRPS5P82675 430 aaKnown RBP21.03■□□□□ 0.96
SHKBP1-222ENST00000600320 TEAD2Q15562 447 aa21.03■□□□□ 0.96
SHKBP1-222ENST00000600320 MON1BQ7L1V2 547 aa21.03■□□□□ 0.96
SHKBP1-222ENST00000600320 PHLDB2Q86SQ0 1253 aa21.03■□□□□ 0.96
SHKBP1-222ENST00000600320 VPS36Q86VN1 386 aa21.03■□□□□ 0.96
SHKBP1-222ENST00000600320 XYLT1Q86Y38 959 aa21.03■□□□□ 0.96
SHKBP1-222ENST00000600320 ING5Q8WYH8 240 aa21.03■□□□□ 0.96
SHKBP1-222ENST00000600320 ANP32BQ92688 251 aaKnown RBP21.03■□□□□ 0.96
SHKBP1-222ENST00000600320 C18orf8Q96DM3 657 aa21.03■□□□□ 0.96
SHKBP1-222ENST00000600320 ATXN3LQ9H3M9 355 aa21.03■□□□□ 0.96
SHKBP1-222ENST00000600320 DEF6Q9H4E7 631 aa21.03■□□□□ 0.96
SHKBP1-222ENST00000600320 SYNCQ9H7C4 482 aa21.03■□□□□ 0.96
SHKBP1-222ENST00000600320 SPTLC3Q9NUV7 552 aa21.03■□□□□ 0.96
SHKBP1-222ENST00000600320 OSER1Q9NX31 292 aa21.03■□□□□ 0.96
SHKBP1-222ENST00000600320 NAGPAQ9UK23 515 aa21.03■□□□□ 0.96
SHKBP1-222ENST00000600320 MRPS23Q9Y3D9 190 aaKnown RBP21.03■□□□□ 0.96
SHKBP1-222ENST00000600320 DENND4AQ7Z401 1863 aa21.03■□□□□ 0.96
SHKBP1-222ENST00000600320 NCANO14594 1321 aa21.03■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms