RNA–Protein interactions for RNA: ENST00000600097.1

SMG9-210, Transcript of SMG9, nonsense mediated mRNA decay factor, humanhuman

TSL 2

Gene SMG9, Length 538 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG9-210ENST00000600097 CNNM4Q6P4Q7 775 aa18.27■□□□□ 0.52
SMG9-210ENST00000600097 XXYLT1Q8NBI6 393 aa18.27■□□□□ 0.52
SMG9-210ENST00000600097 B3GALNT2Q8NCR0 500 aa18.27■□□□□ 0.52
SMG9-210ENST00000600097 SYAP1Q96A49 352 aaPredicted RBP18.27■□□□□ 0.52
SMG9-210ENST00000600097 CCDC127Q96BQ5 260 aa18.27■□□□□ 0.52
SMG9-210ENST00000600097 TMEM30AQ9NV96 361 aa18.27■□□□□ 0.52
SMG9-210ENST00000600097 BCCIPQ9P287 314 aaKnown RBP eCLIP18.27■□□□□ 0.52
SMG9-210ENST00000600097 ATP8B3O60423 1300 aa18.26■□□□□ 0.51
SMG9-210ENST00000600097 UBE4BO95155 1302 aa18.26■□□□□ 0.51
SMG9-210ENST00000600097 SCAMP3O14828 347 aaKnown RBP18.26■□□□□ 0.51
SMG9-210ENST00000600097 CHRM1P11229 460 aaPredicted RBP18.26■□□□□ 0.51
SMG9-210ENST00000600097 CYP2J2P51589 502 aa18.26■□□□□ 0.51
SMG9-210ENST00000600097 GAD2Q05329 585 aa18.26■□□□□ 0.51
SMG9-210ENST00000600097 MESP2Q0VG99 397 aa18.26■□□□□ 0.51
SMG9-210ENST00000600097 LY6G5CQ5SRR4 150 aa18.26■□□□□ 0.51
SMG9-210ENST00000600097 BTBD8Q5XKL5 378 aa18.26■□□□□ 0.51
SMG9-210ENST00000600097 UNQ6494/PRO21346Q6UXR6 183 aa18.26■□□□□ 0.51
SMG9-210ENST00000600097 NUDT18Q6ZVK8 323 aa18.26■□□□□ 0.51
SMG9-210ENST00000600097 C12orf40Q86WS4 652 aa18.26■□□□□ 0.51
SMG9-210ENST00000600097 SYT12Q8IV01 421 aa18.26■□□□□ 0.51
SMG9-210ENST00000600097 IQUBQ8NA54 791 aa18.26■□□□□ 0.51
SMG9-210ENST00000600097 LINC00301Q8NCQ3 95 aa18.26■□□□□ 0.51
SMG9-210ENST00000600097 KCNV2Q8TDN2 545 aa18.26■□□□□ 0.51
SMG9-210ENST00000600097 RLN3Q8WXF3 142 aa18.26■□□□□ 0.51
SMG9-210ENST00000600097 FBXO32Q969P5 355 aa18.26■□□□□ 0.51
SMG9-210ENST00000600097 INTS4Q96HW7 963 aaKnown RBP18.26■□□□□ 0.51
SMG9-210ENST00000600097 DUSP9Q99956 384 aaKnown RBP18.26■□□□□ 0.51
SMG9-210ENST00000600097 NUSAP1Q9BXS6 441 aaKnown RBP18.26■□□□□ 0.51
SMG9-210ENST00000600097 B3GNT5Q9BYG0 378 aa18.26■□□□□ 0.51
SMG9-210ENST00000600097 DPEP3Q9H4B8 488 aa18.26■□□□□ 0.51
SMG9-210ENST00000600097 CIZ1Q9ULV3 898 aaPredicted RBP18.26■□□□□ 0.51
SMG9-210ENST00000600097 MTMR6Q9Y217 621 aa18.26■□□□□ 0.51
SMG9-210ENST00000600097 PTPRDP23468 1912 aa18.25■□□□□ 0.51
SMG9-210ENST00000600097 NUP205Q92621 2012 aa18.25■□□□□ 0.51
SMG9-210ENST00000600097 THADAQ6YHU6 1953 aa18.25■□□□□ 0.51
SMG9-210ENST00000600097 CLDN5O00501 218 aa18.25■□□□□ 0.51
SMG9-210ENST00000600097 TUBP50607 506 aa18.25■□□□□ 0.51
SMG9-210ENST00000600097 FOXC1Q12948 553 aa18.25■□□□□ 0.51
SMG9-210ENST00000600097 TRIM61Q5EBN2 209 aa18.25■□□□□ 0.51
SMG9-210ENST00000600097 HECTD3Q5T447 861 aa18.25■□□□□ 0.51
SMG9-210ENST00000600097 EMC10Q5UCC4 262 aa18.25■□□□□ 0.51
SMG9-210ENST00000600097 SNX30Q5VWJ9 437 aa18.25■□□□□ 0.51
SMG9-210ENST00000600097 TRMT11Q7Z4G4 463 aaKnown RBP18.25■□□□□ 0.51
SMG9-210ENST00000600097 SFTPA1Q8IWL2 248 aa18.25■□□□□ 0.51
SMG9-210ENST00000600097 HMGB4Q8WW32 186 aa18.25■□□□□ 0.51
SMG9-210ENST00000600097 XYLT2Q9H1B5 865 aa18.25■□□□□ 0.51
SMG9-210ENST00000600097 CGNQ9P2M7 1197 aaKnown RBP18.25■□□□□ 0.51
SMG9-210ENST00000600097 NXF1Q9UBU9 619 aaKnown RBP18.25■□□□□ 0.51
SMG9-210ENST00000600097 SH3BP1Q9Y3L3 701 aa18.25■□□□□ 0.51
SMG9-210ENST00000600097 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa18.24■□□□□ 0.51
SMG9-210ENST00000600097 TBC1D3BA6NDS4 549 aa18.24■□□□□ 0.51
SMG9-210ENST00000600097 CLIC2O15247 247 aa18.24■□□□□ 0.51
SMG9-210ENST00000600097 SPTLC2O15270 562 aa18.24■□□□□ 0.51
SMG9-210ENST00000600097 COCHO43405 550 aa18.24■□□□□ 0.51
SMG9-210ENST00000600097 PHACTR2O75167 634 aa18.24■□□□□ 0.51
SMG9-210ENST00000600097 PPP6R2O75170 966 aa18.24■□□□□ 0.51
SMG9-210ENST00000600097 HOXD12P35452 270 aa18.24■□□□□ 0.51
SMG9-210ENST00000600097 MYL6P60660 151 aa18.24■□□□□ 0.51
SMG9-210ENST00000600097 KDSRQ06136 332 aa18.24■□□□□ 0.51
SMG9-210ENST00000600097 UAP1L1Q3KQV9 507 aa18.24■□□□□ 0.51
SMG9-210ENST00000600097 TMEFF1Q8IYR6 380 aa18.24■□□□□ 0.51
SMG9-210ENST00000600097 PGBD3Q8N328 593 aa18.24■□□□□ 0.51
SMG9-210ENST00000600097 PHTF2Q8N3S3 785 aa18.24■□□□□ 0.51
SMG9-210ENST00000600097 ZNF516Q92618 1163 aa18.24■□□□□ 0.51
SMG9-210ENST00000600097 DHX58Q96C10 678 aa18.24■□□□□ 0.51
SMG9-210ENST00000600097 TNIP3Q96KP6 325 aa18.24■□□□□ 0.51
SMG9-210ENST00000600097 ZFRQ96KR1 1074 aaKnown RBP18.24■□□□□ 0.51
SMG9-210ENST00000600097 C7orf25Q9BPX7 421 aa18.24■□□□□ 0.51
SMG9-210ENST00000600097 VRTNQ9H8Y1 702 aa18.24■□□□□ 0.51
SMG9-210ENST00000600097 COMMD8Q9NX08 183 aa18.24■□□□□ 0.51
SMG9-210ENST00000600097 DEC1Q9P2X7 70 aa18.24■□□□□ 0.51
SMG9-210ENST00000600097 CHORDC1Q9UHD1 332 aaPredicted RBP18.24■□□□□ 0.51
SMG9-210ENST00000600097 WASF3Q9UPY6 502 aa18.24■□□□□ 0.51
SMG9-210ENST00000600097 ZFHX4Q86UP3 3567 aa18.24■□□□□ 0.51
SMG9-210ENST00000600097 TCRBV21S2A2A0A5A6 115 aa18.23■□□□□ 0.51
SMG9-210ENST00000600097 C1QTNF9BB2RNN3 333 aa18.23■□□□□ 0.51
SMG9-210ENST00000600097 HOXC11O43248 304 aaPredicted RBP18.23■□□□□ 0.51
SMG9-210ENST00000600097 STX6O43752 255 aa18.23■□□□□ 0.51
SMG9-210ENST00000600097 ADAM23O75077 832 aa18.23■□□□□ 0.51
SMG9-210ENST00000600097 C1QTNF9P0C862 333 aa18.23■□□□□ 0.51
SMG9-210ENST00000600097 PTGER3P43115 390 aa18.23■□□□□ 0.51
SMG9-210ENST00000600097 AP3M2P53677 418 aa18.23■□□□□ 0.51
SMG9-210ENST00000600097 MAP7D1Q3KQU3 841 aa18.23■□□□□ 0.51
SMG9-210ENST00000600097 LYSMD4Q5XG99 296 aa18.23■□□□□ 0.51
SMG9-210ENST00000600097 UNC13DQ70J99 1090 aa18.23■□□□□ 0.51
SMG9-210ENST00000600097 NELFCDQ8IXH7 590 aa18.23■□□□□ 0.51
SMG9-210ENST00000600097 ETFBKMTQ8IXQ9 262 aa18.23■□□□□ 0.51
SMG9-210ENST00000600097 C12orf56Q8IXR9 622 aa18.23■□□□□ 0.51
SMG9-210ENST00000600097 KDF1Q8NAX2 398 aaPredicted RBP18.23■□□□□ 0.51
SMG9-210ENST00000600097 SCFD1Q8WVM8 642 aa18.23■□□□□ 0.51
SMG9-210ENST00000600097 KCNK16Q96T55 309 aa18.23■□□□□ 0.51
SMG9-210ENST00000600097 SLC32A1Q9H598 525 aa18.23■□□□□ 0.51
SMG9-210ENST00000600097 MAGEF1Q9HAY2 307 aa18.23■□□□□ 0.51
SMG9-210ENST00000600097 DMAP1Q9NPF5 467 aaPredicted RBP18.23■□□□□ 0.51
SMG9-210ENST00000600097 IL37Q9NZH6 218 aa18.23■□□□□ 0.51
SMG9-210ENST00000600097 FRYQ5TBA9 3013 aa18.23■□□□□ 0.51
SMG9-210ENST00000600097 TMEM8BA6NDV4 472 aa18.22■□□□□ 0.51
SMG9-210ENST00000600097 AP5Z1O43299 807 aa18.22■□□□□ 0.51
SMG9-210ENST00000600097 TULP3O75386 442 aa18.22■□□□□ 0.51
SMG9-210ENST00000600097 SLC5A3P53794 718 aa18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms