RNA–Protein interactions for RNA: ENST00000599560.5

NUP62-216, Transcript of nucleoporin 62, human

TSL 2

Gene NUP62, Length 562 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NUP62-216	ENST00000599560	FXR2	P51116	673 aa	Known RBP eCLIP	12.98	□□□□□ -0.33
NUP62-216	ENST00000599560	TSPY1	Q01534	308 aa		12.98	□□□□□ -0.33
NUP62-216	ENST00000599560	GUCY1B3	Q02153	619 aa		12.98	□□□□□ -0.33
NUP62-216	ENST00000599560	IL17A	Q16552	155 aa		12.98	□□□□□ -0.33
NUP62-216	ENST00000599560	NFE2	Q16621	373 aa	Predicted RBP	12.98	□□□□□ -0.33
NUP62-216	ENST00000599560	WDR45B	Q5MNZ6	344 aa		12.98	□□□□□ -0.33
NUP62-216	ENST00000599560	SYCP2L	Q5T4T6	812 aa		12.98	□□□□□ -0.33
NUP62-216	ENST00000599560	FSIP1	Q8NA03	581 aa		12.98	□□□□□ -0.33
NUP62-216	ENST00000599560	TERB1	Q8NA31	727 aa		12.98	□□□□□ -0.33
NUP62-216	ENST00000599560	TOE1	Q96GM8	510 aa	Known RBP	12.98	□□□□□ -0.33
NUP62-216	ENST00000599560	ZFR	Q96KR1	1074 aa	Known RBP	12.98	□□□□□ -0.33
NUP62-216	ENST00000599560	MMTAG2	Q9BU76	263 aa	Known RBP	12.98	□□□□□ -0.33
NUP62-216	ENST00000599560	GPR174	Q9BXC1	333 aa		12.98	□□□□□ -0.33
NUP62-216	ENST00000599560	DDX43	Q9NXZ2	648 aa	Known RBP	12.98	□□□□□ -0.33
NUP62-216	ENST00000599560	WSB2	Q9NYS7	404 aa	Predicted RBP	12.98	□□□□□ -0.33
NUP62-216	ENST00000599560	LRWD1	Q9UFC0	647 aa		12.98	□□□□□ -0.33
NUP62-216	ENST00000599560	EIF2B4	Q9UI10	523 aa	Known RBP	12.98	□□□□□ -0.33
NUP62-216	ENST00000599560	GTF3C5	Q9Y5Q8	519 aa	Predicted RBP	12.98	□□□□□ -0.33
NUP62-216	ENST00000599560	ZNF840P	A6NDX5	716 aa		12.97	□□□□□ -0.33
NUP62-216	ENST00000599560	PRRT4	C9JH25	899 aa		12.97	□□□□□ -0.33
NUP62-216	ENST00000599560	ANKRD63	C9JTQ0	380 aa		12.97	□□□□□ -0.33
NUP62-216	ENST00000599560	TNFSF14	O43557	240 aa		12.97	□□□□□ -0.33
NUP62-216	ENST00000599560	CER1	O95813	267 aa		12.97	□□□□□ -0.33
NUP62-216	ENST00000599560	ADH1C	P00326	375 aa		12.97	□□□□□ -0.33
NUP62-216	ENST00000599560	OAS1	P00973	400 aa	Known RBP	12.97	□□□□□ -0.33
NUP62-216	ENST00000599560	NCAM1	P13591	858 aa		12.97	□□□□□ -0.33
NUP62-216	ENST00000599560	GUCY2C	P25092	1073 aa		12.97	□□□□□ -0.33
NUP62-216	ENST00000599560	CD6	P30203	668 aa		12.97	□□□□□ -0.33
NUP62-216	ENST00000599560	CSNK1E	P49674	416 aa	Known RBP	12.97	□□□□□ -0.33
NUP62-216	ENST00000599560	LIG4	P49917	911 aa		12.97	□□□□□ -0.33
NUP62-216	ENST00000599560	NCKAP1L	P55160	1127 aa		12.97	□□□□□ -0.33
NUP62-216	ENST00000599560	CXADR	P78310	365 aa		12.97	□□□□□ -0.33
NUP62-216	ENST00000599560	KCNC4	Q03721	635 aa		12.97	□□□□□ -0.33
NUP62-216	ENST00000599560	TLE3	Q04726	772 aa		12.97	□□□□□ -0.33
NUP62-216	ENST00000599560	LY6D	Q14210	128 aa		12.97	□□□□□ -0.33
NUP62-216	ENST00000599560	KCNT1	Q5JUK3	1230 aa		12.97	□□□□□ -0.33
NUP62-216	ENST00000599560	DCAF12L1	Q5VU92	463 aa		12.97	□□□□□ -0.33
NUP62-216	ENST00000599560	LAYN	Q6UX15	382 aa		12.97	□□□□□ -0.33
NUP62-216	ENST00000599560	KIAA1324	Q6UXG2	1013 aa	Known RBP	12.97	□□□□□ -0.33
NUP62-216	ENST00000599560	LRRC69	Q6ZNQ3	347 aa		12.97	□□□□□ -0.33
NUP62-216	ENST00000599560	TMEM25	Q86YD3	366 aa		12.97	□□□□□ -0.33
NUP62-216	ENST00000599560	IGSF22	Q8N9C0	903 aa		12.97	□□□□□ -0.33
NUP62-216	ENST00000599560	FOXJ1	Q92949	421 aa		12.97	□□□□□ -0.33
NUP62-216	ENST00000599560	TSPAN18	Q96SJ8	248 aa		12.97	□□□□□ -0.33
NUP62-216	ENST00000599560	GABRG3	Q99928	467 aa		12.97	□□□□□ -0.33
NUP62-216	ENST00000599560	ACBD6	Q9BR61	282 aa		12.97	□□□□□ -0.33
NUP62-216	ENST00000599560	MSTO1	Q9BUK6	570 aa		12.97	□□□□□ -0.33
NUP62-216	ENST00000599560	TMEM30A	Q9NV96	361 aa		12.97	□□□□□ -0.33
NUP62-216	ENST00000599560	DNM3	Q9UQ16	869 aa		12.97	□□□□□ -0.33
NUP62-216	ENST00000599560	PCDHGB2	Q9Y5G2	931 aa		12.97	□□□□□ -0.33
NUP62-216	ENST00000599560	COL12A1	Q99715	3063 aa		12.97	□□□□□ -0.33
NUP62-216	ENST00000599560	CKAP5	Q14008	2032 aa		12.96	□□□□□ -0.33
NUP62-216	ENST00000599560	PLXNA2	O75051	1894 aa		12.96	□□□□□ -0.33
NUP62-216	ENST00000599560	HNRNPDL	O14979	420 aa	Known RBP	12.96	□□□□□ -0.33
NUP62-216	ENST00000599560	BCAT2	O15382	392 aa	Predicted RBP	12.96	□□□□□ -0.33
NUP62-216	ENST00000599560	PAX3	P23760	479 aa		12.96	□□□□□ -0.33
NUP62-216	ENST00000599560	IL9R	Q01113	521 aa		12.96	□□□□□ -0.33
NUP62-216	ENST00000599560	CCDC173	Q0VFZ6	552 aa		12.96	□□□□□ -0.33
NUP62-216	ENST00000599560	KIF19	Q2TAC6	998 aa		12.96	□□□□□ -0.33
NUP62-216	ENST00000599560	CFAP221	Q4G0U5	840 aa		12.96	□□□□□ -0.33
NUP62-216	ENST00000599560	BBS7	Q8IWZ6	715 aa		12.96	□□□□□ -0.33
NUP62-216	ENST00000599560	CHPF	Q8IZ52	775 aa		12.96	□□□□□ -0.33
NUP62-216	ENST00000599560	NSUN7	Q8NE18	718 aa	Known RBP	12.96	□□□□□ -0.33
NUP62-216	ENST00000599560	NXPE2	Q96DL1	559 aa		12.96	□□□□□ -0.33
NUP62-216	ENST00000599560	P2RY11	Q96G91	374 aa		12.96	□□□□□ -0.33
NUP62-216	ENST00000599560	MKRN2	Q9H000	416 aa	Known RBP	12.96	□□□□□ -0.33
NUP62-216	ENST00000599560	DERA	Q9Y315	318 aa		12.96	□□□□□ -0.33
NUP62-216	ENST00000599560	STARD13	Q9Y3M8	1113 aa		12.96	□□□□□ -0.33
NUP62-216	ENST00000599560	SNX11	Q9Y5W9	270 aa		12.96	□□□□□ -0.33
NUP62-216	ENST00000599560	ARID1B	Q8NFD5	2236 aa	Predicted RBP	12.96	□□□□□ -0.34
NUP62-216	ENST00000599560	ZFP91-CNTF	A0A0A6YYC7	529 aa	Predicted RBP	12.95	□□□□□ -0.34
NUP62-216	ENST00000599560	PALM2-AKAP2	B1ALY0	433 aa	Predicted RBP	12.95	□□□□□ -0.34
NUP62-216	ENST00000599560		E9PAM4	449 aa		12.95	□□□□□ -0.34
NUP62-216	ENST00000599560	SLC9A3R1	O14745	358 aa	Predicted RBP	12.95	□□□□□ -0.34
NUP62-216	ENST00000599560	HOXC11	O43248	304 aa	Predicted RBP	12.95	□□□□□ -0.34
NUP62-216	ENST00000599560	PIGR	P01833	764 aa		12.95	□□□□□ -0.34
NUP62-216	ENST00000599560	BDNF	P23560	247 aa		12.95	□□□□□ -0.34
NUP62-216	ENST00000599560	LMO2	P25791	158 aa		12.95	□□□□□ -0.34
NUP62-216	ENST00000599560	GRIK1	P39086	918 aa		12.95	□□□□□ -0.34
NUP62-216	ENST00000599560	SMTN	P53814	917 aa		12.95	□□□□□ -0.34
NUP62-216	ENST00000599560	CACNA2D1	P54289	1103 aa		12.95	□□□□□ -0.34
NUP62-216	ENST00000599560	PSMC1	P62191	440 aa	Known RBP	12.95	□□□□□ -0.34
NUP62-216	ENST00000599560	GAD2	Q05329	585 aa		12.95	□□□□□ -0.34
NUP62-216	ENST00000599560	SV2C	Q496J9	727 aa		12.95	□□□□□ -0.34
NUP62-216	ENST00000599560	TAF1B	Q53T94	588 aa	Predicted RBP	12.95	□□□□□ -0.34
NUP62-216	ENST00000599560	ARSH	Q5FYA8	562 aa		12.95	□□□□□ -0.34
NUP62-216	ENST00000599560	FAM171B	Q6P995	826 aa		12.95	□□□□□ -0.34
NUP62-216	ENST00000599560	CRELD2	Q6UXH1	353 aa	Predicted RBP	12.95	□□□□□ -0.34
NUP62-216	ENST00000599560	TRMT11	Q7Z4G4	463 aa	Known RBP	12.95	□□□□□ -0.34
NUP62-216	ENST00000599560	SPATA2L	Q8IUW3	424 aa	Predicted RBP	12.95	□□□□□ -0.34
NUP62-216	ENST00000599560	CD302	Q8IX05	232 aa		12.95	□□□□□ -0.34
NUP62-216	ENST00000599560	SPACA3	Q8IXA5	215 aa		12.95	□□□□□ -0.34
NUP62-216	ENST00000599560	ZSWIM2	Q8NEG5	633 aa		12.95	□□□□□ -0.34
NUP62-216	ENST00000599560	SNIP1	Q8TAD8	396 aa	Known RBP	12.95	□□□□□ -0.34
NUP62-216	ENST00000599560	CXorf38	Q8TB03	319 aa		12.95	□□□□□ -0.34
NUP62-216	ENST00000599560	KCNV2	Q8TDN2	545 aa		12.95	□□□□□ -0.34
NUP62-216	ENST00000599560	WASF1	Q92558	559 aa		12.95	□□□□□ -0.34
NUP62-216	ENST00000599560	PLIN2	Q99541	437 aa		12.95	□□□□□ -0.34
NUP62-216	ENST00000599560	TTLL2	Q9BWV7	592 aa		12.95	□□□□□ -0.34
NUP62-216	ENST00000599560	TM6SF1	Q9BZW5	370 aa		12.95	□□□□□ -0.34

Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms