RNA–Protein interactions for RNA: ENST00000598896.5

SYMPK-212, Transcript of symplekin, humanhuman

TSL 1 (best)

Gene SYMPK, Length 1,899 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYMPK-212ENST00000598896 ACTRT1Q8TDG2 376 aa24.47■■□□□ 1.51
SYMPK-212ENST00000598896 SLC9A7Q96T83 725 aa24.47■■□□□ 1.51
SYMPK-212ENST00000598896 ADAM33Q9BZ11 813 aa24.47■■□□□ 1.51
SYMPK-212ENST00000598896 CRISPLD1Q9H336 500 aa24.47■■□□□ 1.51
SYMPK-212ENST00000598896 CNGB3Q9NQW8 809 aa24.47■■□□□ 1.51
SYMPK-212ENST00000598896 LCHNA4D1U4 455 aa24.46■■□□□ 1.51
SYMPK-212ENST00000598896 MTMR11A4FU01 709 aa24.46■■□□□ 1.51
SYMPK-212ENST00000598896 DPYSL4O14531 572 aa24.46■■□□□ 1.51
SYMPK-212ENST00000598896 TFE3P19532 575 aaPredicted RBP24.46■■□□□ 1.51
SYMPK-212ENST00000598896 GJC1P36383 396 aa24.46■■□□□ 1.51
SYMPK-212ENST00000598896 GPR15P49685 360 aa24.46■■□□□ 1.51
SYMPK-212ENST00000598896 SLC25A11Q02978 314 aaKnown RBP24.46■■□□□ 1.51
SYMPK-212ENST00000598896 ATP13A4Q4VNC1 1196 aa24.46■■□□□ 1.51
SYMPK-212ENST00000598896 EFHC1Q5JVL4 640 aa24.46■■□□□ 1.51
SYMPK-212ENST00000598896 SLC8B1Q6J4K2 584 aa24.46■■□□□ 1.51
SYMPK-212ENST00000598896 KIAA1841Q6NSI8 718 aa24.46■■□□□ 1.51
SYMPK-212ENST00000598896 HFE2Q6ZVN8 426 aa24.46■■□□□ 1.51
SYMPK-212ENST00000598896 SCAMP5Q8TAC9 235 aa24.46■■□□□ 1.51
SYMPK-212ENST00000598896 FAM149B1Q96BN6 582 aa24.46■■□□□ 1.51
SYMPK-212ENST00000598896 LBHD1Q9BQE6 289 aaPredicted RBP24.46■■□□□ 1.51
SYMPK-212ENST00000598896 YJEFN3A6XGL0 299 aa24.45■■□□□ 1.51
SYMPK-212ENST00000598896 E7ENQ6 273 aa24.45■■□□□ 1.51
SYMPK-212ENST00000598896 TNFRSF10BO14763 440 aa24.45■■□□□ 1.51
SYMPK-212ENST00000598896 HSF2BPO75031 334 aa24.45■■□□□ 1.51
SYMPK-212ENST00000598896 FBXO21O94952 628 aa24.45■■□□□ 1.51
SYMPK-212ENST00000598896 ATP2A2P16615 1042 aaKnown RBP24.45■■□□□ 1.51
SYMPK-212ENST00000598896 PAFAH1B1P43034 410 aa24.45■■□□□ 1.51
SYMPK-212ENST00000598896 ATP11AP98196 1134 aa24.45■■□□□ 1.51
SYMPK-212ENST00000598896 DSG1Q02413 1049 aa24.45■■□□□ 1.51
SYMPK-212ENST00000598896 CDO1Q16878 200 aa24.45■■□□□ 1.51
SYMPK-212ENST00000598896 DDX53Q86TM3 631 aaKnown RBP24.45■■□□□ 1.51
SYMPK-212ENST00000598896 SCN4BQ8IWT1 228 aa24.45■■□□□ 1.51
SYMPK-212ENST00000598896 NOA1Q8NC60 698 aaKnown RBP24.45■■□□□ 1.51
SYMPK-212ENST00000598896 STKLD1Q8NE28 680 aa24.45■■□□□ 1.51
SYMPK-212ENST00000598896 CLP1Q92989 425 aaKnown RBP24.45■■□□□ 1.51
SYMPK-212ENST00000598896 HERC2P3Q9BVR0 1158 aa24.45■■□□□ 1.51
SYMPK-212ENST00000598896 OXCT2Q9BYC2 517 aaPredicted RBP24.45■■□□□ 1.51
SYMPK-212ENST00000598896 BACE2Q9Y5Z0 518 aa24.45■■□□□ 1.51
SYMPK-212ENST00000598896 WDR27A2RRH5 827 aa24.45■■□□□ 1.5
SYMPK-212ENST00000598896 EFCAB8A8MWE9 144 aa24.45■■□□□ 1.5
SYMPK-212ENST00000598896 ZBED1O96006 694 aa24.45■■□□□ 1.5
SYMPK-212ENST00000598896 IL1R2P27930 398 aa24.45■■□□□ 1.5
SYMPK-212ENST00000598896 SDC4P31431 198 aa24.45■■□□□ 1.5
SYMPK-212ENST00000598896 GLUD2P49448 558 aa24.45■■□□□ 1.5
SYMPK-212ENST00000598896 SLC5A3P53794 718 aa24.45■■□□□ 1.5
SYMPK-212ENST00000598896 ROR1Q01973 937 aa24.45■■□□□ 1.5
SYMPK-212ENST00000598896 C2orf54Q08AI8 447 aa24.45■■□□□ 1.5
SYMPK-212ENST00000598896 ACAP1Q15027 740 aa24.45■■□□□ 1.5
SYMPK-212ENST00000598896 SDHAF4Q5VUM1 108 aa24.45■■□□□ 1.5
SYMPK-212ENST00000598896 VSTM1Q6UX27 236 aa24.45■■□□□ 1.5
SYMPK-212ENST00000598896 SPATA4Q8NEY3 305 aa24.45■■□□□ 1.5
SYMPK-212ENST00000598896 SP7Q8TDD2 431 aaPredicted RBP24.45■■□□□ 1.5
SYMPK-212ENST00000598896 TSC1Q92574 1164 aa24.45■■□□□ 1.5
SYMPK-212ENST00000598896 RAD9AQ99638 391 aa24.45■■□□□ 1.5
SYMPK-212ENST00000598896 CLSTN3Q9BQT9 956 aa24.45■■□□□ 1.5
SYMPK-212ENST00000598896 C11orf84Q9BUA3 381 aaPredicted RBP24.45■■□□□ 1.5
SYMPK-212ENST00000598896 KLHL11Q9NVR0 708 aa24.45■■□□□ 1.5
SYMPK-212ENST00000598896 ASNSD1Q9NWL6 643 aa24.45■■□□□ 1.5
SYMPK-212ENST00000598896 SBDSQ9Y3A5 250 aaKnown RBP eCLIP24.45■■□□□ 1.5
SYMPK-212ENST00000598896 USP3Q9Y6I4 520 aa24.45■■□□□ 1.5
SYMPK-212ENST00000598896 PGRMC1O00264 195 aaKnown RBP24.44■■□□□ 1.5
SYMPK-212ENST00000598896 PPM1AP35813 382 aa24.44■■□□□ 1.5
SYMPK-212ENST00000598896 YWHAZP63104 245 aaKnown RBP24.44■■□□□ 1.5
SYMPK-212ENST00000598896 DDR2Q16832 855 aa24.44■■□□□ 1.5
SYMPK-212ENST00000598896 RSRC2Q7L4I2 434 aaKnown RBP24.44■■□□□ 1.5
SYMPK-212ENST00000598896 PHOSPHO2Q8TCD6 241 aa24.44■■□□□ 1.5
SYMPK-212ENST00000598896 TTC7AQ9ULT0 858 aaPredicted RBP24.44■■□□□ 1.5
SYMPK-212ENST00000598896 SLC27A5Q9Y2P5 690 aa24.44■■□□□ 1.5
SYMPK-212ENST00000598896 CARNS1A5YM72 827 aa24.43■■□□□ 1.5
SYMPK-212ENST00000598896 TLL1O43897 1013 aa24.43■■□□□ 1.5
SYMPK-212ENST00000598896 SOAT2O75908 522 aa24.43■■□□□ 1.5
SYMPK-212ENST00000598896 RNF8O76064 485 aa24.43■■□□□ 1.5
SYMPK-212ENST00000598896 FGGP02679 453 aa24.43■■□□□ 1.5
SYMPK-212ENST00000598896 FYNP06241 537 aa24.43■■□□□ 1.5
SYMPK-212ENST00000598896 MIPP30301 263 aa24.43■■□□□ 1.5
SYMPK-212ENST00000598896 OR1D2P34982 312 aa24.43■■□□□ 1.5
SYMPK-212ENST00000598896 MAGEA11P43364 429 aa24.43■■□□□ 1.5
SYMPK-212ENST00000598896 RASIP1Q5U651 963 aa24.43■■□□□ 1.5
SYMPK-212ENST00000598896 LRRC38Q5VT99 294 aa24.43■■□□□ 1.5
SYMPK-212ENST00000598896 PM20D1Q6GTS8 502 aa24.43■■□□□ 1.5
SYMPK-212ENST00000598896 KATNAL2Q8IYT4 538 aa24.43■■□□□ 1.5
SYMPK-212ENST00000598896 DEFB106AQ8N104 65 aa24.43■■□□□ 1.5
SYMPK-212ENST00000598896 ACSF2Q96CM8 615 aaPredicted RBP24.43■■□□□ 1.5
SYMPK-212ENST00000598896 PEBP4Q96S96 227 aa24.43■■□□□ 1.5
SYMPK-212ENST00000598896 DDX23Q9BUQ8 820 aaKnown RBP24.43■■□□□ 1.5
SYMPK-212ENST00000598896 AAASQ9NRG9 546 aa24.43■■□□□ 1.5
SYMPK-212ENST00000598896 PCDHB12Q9Y5F1 795 aa24.43■■□□□ 1.5
SYMPK-212ENST00000598896 PLXNA4Q9HCM2 1894 aa24.43■■□□□ 1.5
SYMPK-212ENST00000598896 COL4A4P53420 1690 aaPredicted RBP24.43■■□□□ 1.5
SYMPK-212ENST00000598896 DAB1O75553 588 aa24.43■■□□□ 1.5
SYMPK-212ENST00000598896 FGF18O76093 207 aa24.43■■□□□ 1.5
SYMPK-212ENST00000598896 MATKP42679 507 aa24.43■■□□□ 1.5
SYMPK-212ENST00000598896 PTPN9P43378 593 aa24.43■■□□□ 1.5
SYMPK-212ENST00000598896 ERCC6LQ2NKX8 1250 aa24.43■■□□□ 1.5
SYMPK-212ENST00000598896 SMTNL2Q2TAL5 461 aa24.43■■□□□ 1.5
SYMPK-212ENST00000598896 VPS52Q8N1B4 723 aa24.43■■□□□ 1.5
SYMPK-212ENST00000598896 SPPL2BQ8TCT7 592 aa24.43■■□□□ 1.5
SYMPK-212ENST00000598896 FAM172AQ8WUF8 416 aa24.43■■□□□ 1.5
SYMPK-212ENST00000598896 AUTS2Q8WXX7 1259 aa24.43■■□□□ 1.5
SYMPK-212ENST00000598896 C8orf48Q96LL4 319 aa24.43■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms