RNA–Protein interactions for RNA: ENST00000598359.5

SCAF1-203, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 662 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-203ENST00000598359 GALK1P51570 392 aa14.58□□□□□ -0.08
SCAF1-203ENST00000598359 SRSF5Q13243 272 aaKnown RBP14.58□□□□□ -0.08
SCAF1-203ENST00000598359 LPAL2Q16609 132 aa14.58□□□□□ -0.08
SCAF1-203ENST00000598359 TMEM196Q5HYL7 178 aa14.58□□□□□ -0.08
SCAF1-203ENST00000598359 MAMSTRQ6ZN01 415 aa14.58□□□□□ -0.08
SCAF1-203ENST00000598359 GPRIN1Q7Z2K8 1008 aa14.58□□□□□ -0.08
SCAF1-203ENST00000598359 CRYBG2Q8N1P7 616 aa14.58□□□□□ -0.08
SCAF1-203ENST00000598359 CPA6Q8N4T0 437 aa14.58□□□□□ -0.08
SCAF1-203ENST00000598359 WHAMMQ8TF30 809 aa14.58□□□□□ -0.08
SCAF1-203ENST00000598359 ATP2A3Q93084 1043 aa14.58□□□□□ -0.08
SCAF1-203ENST00000598359 SLITRK1Q96PX8 696 aa14.58□□□□□ -0.08
SCAF1-203ENST00000598359 GSDMAQ96QA5 445 aa14.58□□□□□ -0.08
SCAF1-203ENST00000598359 IER2Q9BTL4 223 aa14.58□□□□□ -0.08
SCAF1-203ENST00000598359 IMPG2Q9BZV3 1241 aa14.58□□□□□ -0.08
SCAF1-203ENST00000598359 NIF3L1Q9GZT8 377 aa14.58□□□□□ -0.08
SCAF1-203ENST00000598359 CCSER2Q9H7U1 834 aa14.58□□□□□ -0.08
SCAF1-203ENST00000598359 TMEM8AQ9HCN3 771 aa14.58□□□□□ -0.08
SCAF1-203ENST00000598359 EHD2Q9NZN4 543 aa14.58□□□□□ -0.08
SCAF1-203ENST00000598359 GMIPQ9P107 970 aa14.58□□□□□ -0.08
SCAF1-203ENST00000598359 CFAP97Q9P2B7 532 aa14.58□□□□□ -0.08
SCAF1-203ENST00000598359 HELZP42694 1942 aaKnown RBP14.57□□□□□ -0.08
SCAF1-203ENST00000598359 ANTXRLA6NF34 631 aa14.57□□□□□ -0.08
SCAF1-203ENST00000598359 K7ESF4 209 aa14.57□□□□□ -0.08
SCAF1-203ENST00000598359 TRDMT1O14717 391 aaKnown RBP14.57□□□□□ -0.08
SCAF1-203ENST00000598359 COCHO43405 550 aa14.57□□□□□ -0.08
SCAF1-203ENST00000598359 RTN3O95197 1032 aaPredicted RBP14.57□□□□□ -0.08
SCAF1-203ENST00000598359 EPB41P11171 864 aaKnown RBP14.57□□□□□ -0.08
SCAF1-203ENST00000598359 MBL2P11226 248 aaPredicted RBP14.57□□□□□ -0.08
SCAF1-203ENST00000598359 CD44P16070 742 aaKnown RBP14.57□□□□□ -0.08
SCAF1-203ENST00000598359 PXNP49023 591 aaPredicted RBP14.57□□□□□ -0.08
SCAF1-203ENST00000598359 MXI1P50539 228 aa14.57□□□□□ -0.08
SCAF1-203ENST00000598359 SLC7A9P82251 487 aa14.57□□□□□ -0.08
SCAF1-203ENST00000598359 INCA1Q0VD86 236 aa14.57□□□□□ -0.08
SCAF1-203ENST00000598359 GRSF1Q12849 480 aaKnown RBP eCLIP14.57□□□□□ -0.08
SCAF1-203ENST00000598359 ZNF394Q53GI3 561 aa14.57□□□□□ -0.08
SCAF1-203ENST00000598359 DCAF17Q5H9S7 520 aaPredicted RBP14.57□□□□□ -0.08
SCAF1-203ENST00000598359 TCERG1LQ5VWI1 586 aa14.57□□□□□ -0.08
SCAF1-203ENST00000598359 KRT39Q6A163 491 aa14.57□□□□□ -0.08
SCAF1-203ENST00000598359 FILIP1Q7Z7B0 1213 aa14.57□□□□□ -0.08
SCAF1-203ENST00000598359 UNC93AQ86WB7 457 aa14.57□□□□□ -0.08
SCAF1-203ENST00000598359 SPATA20Q8TB22 786 aa14.57□□□□□ -0.08
SCAF1-203ENST00000598359 EZH1Q92800 747 aaPredicted RBP14.57□□□□□ -0.08
SCAF1-203ENST00000598359 ARID3AQ99856 593 aa14.57□□□□□ -0.08
SCAF1-203ENST00000598359 P2RY13Q9BPV8 354 aa14.57□□□□□ -0.08
SCAF1-203ENST00000598359 DLL3Q9NYJ7 618 aa14.57□□□□□ -0.08
SCAF1-203ENST00000598359 SMG5Q9UPR3 1016 aaKnown RBP14.57□□□□□ -0.08
SCAF1-203ENST00000598359 BAHCC1Q9P281 2608 aa14.57□□□□□ -0.08
SCAF1-203ENST00000598359 RNF40O75150 1001 aa14.56□□□□□ -0.08
SCAF1-203ENST00000598359 CILPO75339 1184 aa14.56□□□□□ -0.08
SCAF1-203ENST00000598359 OLFM2O95897 454 aa14.56□□□□□ -0.08
SCAF1-203ENST00000598359 TCF3P15923 654 aa14.56□□□□□ -0.08
SCAF1-203ENST00000598359 GTF2H1P32780 548 aa14.56□□□□□ -0.08
SCAF1-203ENST00000598359 PPP3CCP48454 512 aa14.56□□□□□ -0.08
SCAF1-203ENST00000598359 PDE6CP51160 858 aa14.56□□□□□ -0.08
SCAF1-203ENST00000598359 PPP2R5DQ14738 602 aa14.56□□□□□ -0.08
SCAF1-203ENST00000598359 CBWD6Q4V339 395 aa14.56□□□□□ -0.08
SCAF1-203ENST00000598359 CBWD3Q5JTY5 395 aa14.56□□□□□ -0.08
SCAF1-203ENST00000598359 CBWD5Q5RIA9 395 aa14.56□□□□□ -0.08
SCAF1-203ENST00000598359 RUBCNQ92622 972 aa14.56□□□□□ -0.08
SCAF1-203ENST00000598359 TATDN2Q93075 761 aa14.56□□□□□ -0.08
SCAF1-203ENST00000598359 WBP2Q969T9 261 aa14.56□□□□□ -0.08
SCAF1-203ENST00000598359 CYFIP2Q96F07 1278 aa14.56□□□□□ -0.08
SCAF1-203ENST00000598359 TSG101Q99816 390 aa14.56□□□□□ -0.08
SCAF1-203ENST00000598359 NT5C1AQ9BXI3 368 aa14.56□□□□□ -0.08
SCAF1-203ENST00000598359 EPC1Q9H2F5 836 aa14.56□□□□□ -0.08
SCAF1-203ENST00000598359 CYP3A43Q9HB55 503 aa14.56□□□□□ -0.08
SCAF1-203ENST00000598359 IL37Q9NZH6 218 aa14.56□□□□□ -0.08
SCAF1-203ENST00000598359 MAN1B1Q9UKM7 699 aa14.56□□□□□ -0.08
SCAF1-203ENST00000598359 CHD6Q8TD26 2715 aa14.56□□□□□ -0.08
SCAF1-203ENST00000598359 HHLA1C9JL84 531 aa14.55□□□□□ -0.08
SCAF1-203ENST00000598359 CYP17A1P05093 508 aa14.55□□□□□ -0.08
SCAF1-203ENST00000598359 FAM200BP0CF97 657 aa14.55□□□□□ -0.08
SCAF1-203ENST00000598359 IRF1P10914 325 aa14.55□□□□□ -0.08
SCAF1-203ENST00000598359 NRLP54845 237 aa14.55□□□□□ -0.08
SCAF1-203ENST00000598359 ZNF445P59923 1031 aa14.55□□□□□ -0.08
SCAF1-203ENST00000598359 ENPEPQ07075 957 aa14.55□□□□□ -0.08
SCAF1-203ENST00000598359 GAB4Q2WGN9 574 aa14.55□□□□□ -0.08
SCAF1-203ENST00000598359 COBLL1Q53SF7 1204 aa14.55□□□□□ -0.08
SCAF1-203ENST00000598359 HECTD3Q5T447 861 aa14.55□□□□□ -0.08
SCAF1-203ENST00000598359 CLEC20AQ6ZU45 233 aa14.55□□□□□ -0.08
SCAF1-203ENST00000598359 ZC3H3Q8IXZ2 948 aaKnown RBP14.55□□□□□ -0.08
SCAF1-203ENST00000598359 SYNPOQ8N3V7 929 aa14.55□□□□□ -0.08
SCAF1-203ENST00000598359 CCDC150Q8NCX0 1101 aa14.55□□□□□ -0.08
SCAF1-203ENST00000598359 FBXL13Q8NEE6 735 aa14.55□□□□□ -0.08
SCAF1-203ENST00000598359 PDZD8Q8NEN9 1154 aa14.55□□□□□ -0.08
SCAF1-203ENST00000598359 GPT2Q8TD30 523 aa14.55□□□□□ -0.08
SCAF1-203ENST00000598359 CD101Q93033 1021 aa14.55□□□□□ -0.08
SCAF1-203ENST00000598359 ZFRQ96KR1 1074 aaKnown RBP14.55□□□□□ -0.08
SCAF1-203ENST00000598359 TIGD1Q96MW7 591 aa14.55□□□□□ -0.08
SCAF1-203ENST00000598359 HNRNPABQ99729 332 aaKnown RBP14.55□□□□□ -0.08
SCAF1-203ENST00000598359 FAM126AQ9BYI3 521 aaPredicted RBP14.55□□□□□ -0.08
SCAF1-203ENST00000598359 CSNK1G1Q9HCP0 422 aa14.55□□□□□ -0.08
SCAF1-203ENST00000598359 RAB20Q9NX57 234 aa14.55□□□□□ -0.08
SCAF1-203ENST00000598359 NCDNQ9UBB6 729 aa14.55□□□□□ -0.08
SCAF1-203ENST00000598359 BIN1O00499 593 aa14.54□□□□□ -0.08
SCAF1-203ENST00000598359 CYP26A1O43174 497 aa14.54□□□□□ -0.08
SCAF1-203ENST00000598359 HRO43593 1189 aa14.54□□□□□ -0.08
SCAF1-203ENST00000598359 NFATC1O95644 943 aa14.54□□□□□ -0.08
SCAF1-203ENST00000598359 TBX18O95935 607 aa14.54□□□□□ -0.08
SCAF1-203ENST00000598359 ZDHHC11BP0C7U3 371 aa14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms