RNA–Protein interactions for RNA: ENST00000598108.5

IRF3-220, Transcript of interferon regulatory factor 3, humanhuman

TSL 3

Gene IRF3, Length 1,118 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-220ENST00000598108 HPS4Q9NQG7 708 aa24.07■■□□□ 1.44
IRF3-220ENST00000598108 OSER1Q9NX31 292 aa24.07■■□□□ 1.44
IRF3-220ENST00000598108 SMPD4Q9NXE4 827 aa24.07■■□□□ 1.44
IRF3-220ENST00000598108 DLGAP2Q9P1A6 1054 aa24.07■■□□□ 1.44
IRF3-220ENST00000598108 TSPAN16Q9UKR8 245 aa24.07■■□□□ 1.44
IRF3-220ENST00000598108 KIAA1257Q9ULG3 409 aa24.07■■□□□ 1.44
IRF3-220ENST00000598108 GTPBP10A4D1E9 387 aaKnown RBP24.06■■□□□ 1.44
IRF3-220ENST00000598108 OTOL1A6NHN0 477 aaPredicted RBP24.06■■□□□ 1.44
IRF3-220ENST00000598108 KCNJ18B7U540 433 aa24.06■■□□□ 1.44
IRF3-220ENST00000598108 LEFTY2O00292 366 aa24.06■■□□□ 1.44
IRF3-220ENST00000598108 O00370 1275 aa24.06■■□□□ 1.44
IRF3-220ENST00000598108 PAEPP09466 180 aa24.06■■□□□ 1.44
IRF3-220ENST00000598108 ARSAP15289 507 aa24.06■■□□□ 1.44
IRF3-220ENST00000598108 TARSP26639 723 aaKnown RBP24.06■■□□□ 1.44
IRF3-220ENST00000598108 PON1P27169 355 aa24.06■■□□□ 1.44
IRF3-220ENST00000598108 PDE6CP51160 858 aa24.06■■□□□ 1.44
IRF3-220ENST00000598108 ZNF132P52740 706 aa24.06■■□□□ 1.44
IRF3-220ENST00000598108 KCNJ12Q14500 433 aa24.06■■□□□ 1.44
IRF3-220ENST00000598108 MTF1Q14872 753 aa24.06■■□□□ 1.44
IRF3-220ENST00000598108 EXOC3L4Q17RC7 722 aa24.06■■□□□ 1.44
IRF3-220ENST00000598108 VWA3BQ502W6 1294 aa24.06■■□□□ 1.44
IRF3-220ENST00000598108 HECTD3Q5T447 861 aa24.06■■□□□ 1.44
IRF3-220ENST00000598108 PIGZQ86VD9 579 aa24.06■■□□□ 1.44
IRF3-220ENST00000598108 CCDC105Q8IYK2 499 aa24.06■■□□□ 1.44
IRF3-220ENST00000598108 RBBP8NLQ8NC74 664 aaPredicted RBP24.06■■□□□ 1.44
IRF3-220ENST00000598108 UBA3Q8TBC4 463 aa24.06■■□□□ 1.44
IRF3-220ENST00000598108 UBXN6Q9BZV1 441 aa24.06■■□□□ 1.44
IRF3-220ENST00000598108 NDST4Q9H3R1 872 aa24.06■■□□□ 1.44
IRF3-220ENST00000598108 EBF3Q9H4W6 596 aa24.06■■□□□ 1.44
IRF3-220ENST00000598108 ANO10Q9NW15 660 aa24.06■■□□□ 1.44
IRF3-220ENST00000598108 CNTN6Q9UQ52 1028 aa24.06■■□□□ 1.44
IRF3-220ENST00000598108 CPQQ9Y646 472 aa24.06■■□□□ 1.44
IRF3-220ENST00000598108 USP3Q9Y6I4 520 aa24.06■■□□□ 1.44
IRF3-220ENST00000598108 F5P12259 2224 aa24.05■■□□□ 1.44
IRF3-220ENST00000598108 PRKCSHP14314 528 aaPredicted RBP24.05■■□□□ 1.44
IRF3-220ENST00000598108 TCF3P15923 654 aa24.05■■□□□ 1.44
IRF3-220ENST00000598108 KPNA1P52294 538 aaPredicted RBP24.05■■□□□ 1.44
IRF3-220ENST00000598108 PDE4CQ08493 712 aa24.05■■□□□ 1.44
IRF3-220ENST00000598108 TCF15Q12870 199 aa24.05■■□□□ 1.44
IRF3-220ENST00000598108 FZD5Q13467 585 aa24.05■■□□□ 1.44
IRF3-220ENST00000598108 TCP11X2Q5H9J9 407 aa24.05■■□□□ 1.44
IRF3-220ENST00000598108 CC2D1AQ6P1N0 951 aaPredicted RBP24.05■■□□□ 1.44
IRF3-220ENST00000598108 SCD5Q86SK9 330 aa24.05■■□□□ 1.44
IRF3-220ENST00000598108 FAM3CQ92520 227 aa24.05■■□□□ 1.44
IRF3-220ENST00000598108 KCNH6Q9H252 994 aa24.05■■□□□ 1.44
IRF3-220ENST00000598108 LINC00597Q9H2U6 94 aa24.05■■□□□ 1.44
IRF3-220ENST00000598108 NMUR1Q9HB89 426 aa24.05■■□□□ 1.44
IRF3-220ENST00000598108 ARIH1Q9Y4X5 557 aaPredicted RBP24.05■■□□□ 1.44
IRF3-220ENST00000598108 WNT6Q9Y6F9 365 aa24.05■■□□□ 1.44
IRF3-220ENST00000598108 MUC6Q6W4X9 2439 aa24.04■■□□□ 1.44
IRF3-220ENST00000598108 GALR2O43603 387 aaPredicted RBP24.04■■□□□ 1.44
IRF3-220ENST00000598108 TBX18O95935 607 aa24.04■■□□□ 1.44
IRF3-220ENST00000598108 MBL2P11226 248 aaPredicted RBP24.04■■□□□ 1.44
IRF3-220ENST00000598108 BRD2P25440 801 aaKnown RBP24.04■■□□□ 1.44
IRF3-220ENST00000598108 MLLT6P55198 1093 aaPredicted RBP24.04■■□□□ 1.44
IRF3-220ENST00000598108 STX1AQ16623 288 aa24.04■■□□□ 1.44
IRF3-220ENST00000598108 PKDCCQ504Y2 493 aa24.04■■□□□ 1.44
IRF3-220ENST00000598108 DPY19L2P1Q6NXN4 242 aa24.04■■□□□ 1.44
IRF3-220ENST00000598108 TXNDC11Q6PKC3 985 aa24.04■■□□□ 1.44
IRF3-220ENST00000598108 LCLAT1Q6UWP7 414 aa24.04■■□□□ 1.44
IRF3-220ENST00000598108 DTWD2Q8NBA8 298 aa24.04■■□□□ 1.44
IRF3-220ENST00000598108 ZFRQ96KR1 1074 aaKnown RBP24.04■■□□□ 1.44
IRF3-220ENST00000598108 SIX2Q9NPC8 291 aa24.04■■□□□ 1.44
IRF3-220ENST00000598108 TLR8Q9NR97 1041 aaKnown RBP24.04■■□□□ 1.44
IRF3-220ENST00000598108 FANCLQ9NW38 375 aa24.04■■□□□ 1.44
IRF3-220ENST00000598108 DUS2Q9NX74 493 aaKnown RBP24.04■■□□□ 1.44
IRF3-220ENST00000598108 DENND4CQ5VZ89 1909 aa24.04■■□□□ 1.44
IRF3-220ENST00000598108 OBSL1O75147 1896 aa24.03■■□□□ 1.44
IRF3-220ENST00000598108 A0A1W2PQH9 124 aa24.03■■□□□ 1.44
IRF3-220ENST00000598108 SPECC1L-ADORA2AF8WAN1 911 aa24.03■■□□□ 1.44
IRF3-220ENST00000598108 MAN2B1O00754 1011 aa24.03■■□□□ 1.44
IRF3-220ENST00000598108 TUBP50607 506 aa24.03■■□□□ 1.44
IRF3-220ENST00000598108 NUBP1P53384 320 aa24.03■■□□□ 1.44
IRF3-220ENST00000598108 BCAT1P54687 386 aa24.03■■□□□ 1.44
IRF3-220ENST00000598108 RUNX3Q13761 415 aa24.03■■□□□ 1.44
IRF3-220ENST00000598108 CNGA2Q16280 664 aa24.03■■□□□ 1.44
IRF3-220ENST00000598108 ITPRIPL2Q3MIP1 535 aa24.03■■□□□ 1.44
IRF3-220ENST00000598108 RAB41Q5JT25 222 aa24.03■■□□□ 1.44
IRF3-220ENST00000598108 CDKAL1Q5VV42 579 aa24.03■■□□□ 1.44
IRF3-220ENST00000598108 CAVIN1Q6NZI2 390 aaKnown RBP24.03■■□□□ 1.44
IRF3-220ENST00000598108 OSCP1Q8WVF1 389 aa24.03■■□□□ 1.44
IRF3-220ENST00000598108 NELL2Q99435 816 aa24.03■■□□□ 1.44
IRF3-220ENST00000598108 OSBPL6Q9BZF3 934 aa24.03■■□□□ 1.44
IRF3-220ENST00000598108 C8orf33Q9H7E9 229 aaPredicted RBP24.03■■□□□ 1.44
IRF3-220ENST00000598108 HESX1Q9UBX0 185 aa24.03■■□□□ 1.44
IRF3-220ENST00000598108 APEX2Q9UBZ4 518 aa24.03■■□□□ 1.44
IRF3-220ENST00000598108 AJAP1Q9UKB5 411 aaPredicted RBP24.03■■□□□ 1.44
IRF3-220ENST00000598108 NDRG2Q9UN36 371 aaKnown RBP24.03■■□□□ 1.44
IRF3-220ENST00000598108 NUP210Q8TEM1 1887 aaPredicted RBP24.02■■□□□ 1.44
IRF3-220ENST00000598108 SCAMP3O14828 347 aaKnown RBP24.02■■□□□ 1.44
IRF3-220ENST00000598108 XPO1O14980 1071 aaKnown RBP24.02■■□□□ 1.44
IRF3-220ENST00000598108 TLR5O60602 858 aa24.02■■□□□ 1.44
IRF3-220ENST00000598108 KRT5P13647 590 aa24.02■■□□□ 1.44
IRF3-220ENST00000598108 CTHP32929 405 aa24.02■■□□□ 1.44
IRF3-220ENST00000598108 MFAP3P55082 362 aa24.02■■□□□ 1.44
IRF3-220ENST00000598108 TYRO3Q06418 890 aa24.02■■□□□ 1.44
IRF3-220ENST00000598108 BST2Q10589 180 aaKnown RBP24.02■■□□□ 1.44
IRF3-220ENST00000598108 PDGFRLQ15198 375 aa24.02■■□□□ 1.44
IRF3-220ENST00000598108 CCDC186Q7Z3E2 898 aa24.02■■□□□ 1.44
IRF3-220ENST00000598108 NDRG1Q92597 394 aaKnown RBP24.02■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms