RNA–Protein interactions for RNA: ENST00000597618.5

TRIM28-210, Transcript of tripartite motif containing 28, humanhuman

TSL 2

Gene TRIM28, Length 609 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-210ENST00000597618 CDH9Q9ULB4 789 aa10.82□□□□□ -0.68
TRIM28-210ENST00000597618 E2F8A0AVK6 867 aa10.81□□□□□ -0.68
TRIM28-210ENST00000597618 TULP1O00294 542 aaPredicted RBP10.81□□□□□ -0.68
TRIM28-210ENST00000597618 HOXC11O43248 304 aaPredicted RBP10.81□□□□□ -0.68
TRIM28-210ENST00000597618 HCRTO43612 131 aa10.81□□□□□ -0.68
TRIM28-210ENST00000597618 CBFA2T3O75081 653 aa10.81□□□□□ -0.68
TRIM28-210ENST00000597618 NDUFS2O75306 463 aa10.81□□□□□ -0.68
TRIM28-210ENST00000597618 ZIC2O95409 532 aaPredicted RBP10.81□□□□□ -0.68
TRIM28-210ENST00000597618 OAS1P00973 400 aaKnown RBP10.81□□□□□ -0.68
TRIM28-210ENST00000597618 KRT19P08727 400 aa10.81□□□□□ -0.68
TRIM28-210ENST00000597618 MBL2P11226 248 aaPredicted RBP10.81□□□□□ -0.68
TRIM28-210ENST00000597618 PLCG1P19174 1290 aa10.81□□□□□ -0.68
TRIM28-210ENST00000597618 BDNFP23560 247 aa10.81□□□□□ -0.68
TRIM28-210ENST00000597618 ADSSP30520 456 aa10.81□□□□□ -0.68
TRIM28-210ENST00000597618 NTSR1P30989 418 aa10.81□□□□□ -0.68
TRIM28-210ENST00000597618 PSMC1P62191 440 aaKnown RBP10.81□□□□□ -0.68
TRIM28-210ENST00000597618 NOP14P78316 857 aaKnown RBP10.81□□□□□ -0.68
TRIM28-210ENST00000597618 RBP5P82980 135 aa10.81□□□□□ -0.68
TRIM28-210ENST00000597618 GRIK2Q13002 908 aa10.81□□□□□ -0.68
TRIM28-210ENST00000597618 SOWAHAQ2M3V2 549 aa10.81□□□□□ -0.68
TRIM28-210ENST00000597618 WDR45BQ5MNZ6 344 aa10.81□□□□□ -0.68
TRIM28-210ENST00000597618 C10orf76Q5T2E6 689 aa10.81□□□□□ -0.68
TRIM28-210ENST00000597618 ARL6IP4Q66PJ3 421 aaKnown RBP10.81□□□□□ -0.68
TRIM28-210ENST00000597618 BRSK2Q8IWQ3 736 aa10.81□□□□□ -0.68
TRIM28-210ENST00000597618 ETFBKMTQ8IXQ9 262 aa10.81□□□□□ -0.68
TRIM28-210ENST00000597618 CSGALNACT2Q8N6G5 542 aa10.81□□□□□ -0.68
TRIM28-210ENST00000597618 TERB1Q8NA31 727 aa10.81□□□□□ -0.68
TRIM28-210ENST00000597618 ADAM32Q8TC27 787 aa10.81□□□□□ -0.68
TRIM28-210ENST00000597618 ZNF419Q96HQ0 510 aaPredicted RBP10.81□□□□□ -0.68
TRIM28-210ENST00000597618 AK8Q96MA6 479 aa10.81□□□□□ -0.68
TRIM28-210ENST00000597618 SLITRK1Q96PX8 696 aa10.81□□□□□ -0.68
TRIM28-210ENST00000597618 FAM213AQ9BRX8 229 aa10.81□□□□□ -0.68
TRIM28-210ENST00000597618 KIAA1522Q9P206 1035 aaPredicted RBP10.81□□□□□ -0.68
TRIM28-210ENST00000597618 DEC1Q9P2X7 70 aa10.81□□□□□ -0.68
TRIM28-210ENST00000597618 PCOLCE2Q9UKZ9 415 aa10.81□□□□□ -0.68
TRIM28-210ENST00000597618 CYP8B1Q9UNU6 501 aa10.81□□□□□ -0.68
TRIM28-210ENST00000597618 R3HCC1Q9Y3T6 440 aaKnown RBP10.81□□□□□ -0.68
TRIM28-210ENST00000597618 ANAPC1Q9H1A4 1944 aa10.81□□□□□ -0.68
TRIM28-210ENST00000597618 CFAP46Q8IYW2 2715 aa10.81□□□□□ -0.68
TRIM28-210ENST00000597618 ASXL3Q9C0F0 2248 aa10.81□□□□□ -0.68
TRIM28-210ENST00000597618 A0A1W2PQF6 199 aa10.8□□□□□ -0.68
TRIM28-210ENST00000597618 ATP2C2O75185 946 aa10.8□□□□□ -0.68
TRIM28-210ENST00000597618 TULP3O75386 442 aa10.8□□□□□ -0.68
TRIM28-210ENST00000597618 ABL1P00519 1130 aa10.8□□□□□ -0.68
TRIM28-210ENST00000597618 NDUFV2P19404 249 aa10.8□□□□□ -0.68
TRIM28-210ENST00000597618 UBA7P41226 1012 aa10.8□□□□□ -0.68
TRIM28-210ENST00000597618 WNT7BP56706 349 aa10.8□□□□□ -0.68
TRIM28-210ENST00000597618 CYP27A1Q02318 531 aa10.8□□□□□ -0.68
TRIM28-210ENST00000597618 MYO1EQ12965 1108 aa10.8□□□□□ -0.68
TRIM28-210ENST00000597618 TDRD10Q5VZ19 366 aaKnown RBP10.8□□□□□ -0.68
TRIM28-210ENST00000597618 SDE2Q6IQ49 451 aa10.8□□□□□ -0.68
TRIM28-210ENST00000597618 DPH6Q7L8W6 267 aa10.8□□□□□ -0.68
TRIM28-210ENST00000597618 TMPRSS7Q7RTY8 843 aa10.8□□□□□ -0.68
TRIM28-210ENST00000597618 SLCO6A1Q86UG4 719 aa10.8□□□□□ -0.68
TRIM28-210ENST00000597618 RASSF8Q8NHQ8 419 aa10.8□□□□□ -0.68
TRIM28-210ENST00000597618 CXorf38Q8TB03 319 aa10.8□□□□□ -0.68
TRIM28-210ENST00000597618 RAD54LQ92698 747 aa10.8□□□□□ -0.68
TRIM28-210ENST00000597618 C8orf48Q96LL4 319 aa10.8□□□□□ -0.68
TRIM28-210ENST00000597618 BLOC1S4Q9NUP1 217 aa10.8□□□□□ -0.68
TRIM28-210ENST00000597618 CACNA2D2Q9NY47 1150 aa10.8□□□□□ -0.68
TRIM28-210ENST00000597618 RBAKQ9NYW8 714 aaPredicted RBP10.8□□□□□ -0.68
TRIM28-210ENST00000597618 EXOC7Q9UPT5 735 aa10.8□□□□□ -0.68
TRIM28-210ENST00000597618 STARD13Q9Y3M8 1113 aa10.8□□□□□ -0.68
TRIM28-210ENST00000597618 URB1O60287 2271 aaKnown RBP10.8□□□□□ -0.68
TRIM28-210ENST00000597618 ADAMTS9Q9P2N4 1935 aa10.8□□□□□ -0.68
TRIM28-210ENST00000597618 A0A087WV48 116 aa10.79□□□□□ -0.68
TRIM28-210ENST00000597618 F8VP50 259 aa10.79□□□□□ -0.68
TRIM28-210ENST00000597618 CER1O95813 267 aa10.79□□□□□ -0.68
TRIM28-210ENST00000597618 LDHAP00338 332 aaKnown RBP10.79□□□□□ -0.68
TRIM28-210ENST00000597618 TMEM191BP0C7N4 346 aa10.79□□□□□ -0.68
TRIM28-210ENST00000597618 ZNF883P0CG24 379 aa10.79□□□□□ -0.68
TRIM28-210ENST00000597618 WASP42768 502 aa10.79□□□□□ -0.68
TRIM28-210ENST00000597618 C19orf57Q0VDD7 668 aa10.79□□□□□ -0.68
TRIM28-210ENST00000597618 TAF10Q12962 218 aa10.79□□□□□ -0.68
TRIM28-210ENST00000597618 MCM6Q14566 821 aa10.79□□□□□ -0.68
TRIM28-210ENST00000597618 ZNF720Q7Z2F6 126 aa10.79□□□□□ -0.68
TRIM28-210ENST00000597618 LIMS2Q7Z4I7 341 aa10.79□□□□□ -0.68
TRIM28-210ENST00000597618 MIB1Q86YT6 1006 aa10.79□□□□□ -0.68
TRIM28-210ENST00000597618 SCUBE3Q8IX30 993 aa10.79□□□□□ -0.68
TRIM28-210ENST00000597618 CHPFQ8IZ52 775 aa10.79□□□□□ -0.68
TRIM28-210ENST00000597618 NAT16Q8N8M0 369 aa10.79□□□□□ -0.68
TRIM28-210ENST00000597618 KRI1Q8N9T8 703 aaKnown RBP10.79□□□□□ -0.68
TRIM28-210ENST00000597618 PDZD8Q8NEN9 1154 aa10.79□□□□□ -0.68
TRIM28-210ENST00000597618 MYCBPAPQ8TBZ2 947 aa10.79□□□□□ -0.68
TRIM28-210ENST00000597618 IPO4Q8TEX9 1081 aaKnown RBP10.79□□□□□ -0.68
TRIM28-210ENST00000597618 SETD7Q8WTS6 366 aaKnown RBP10.79□□□□□ -0.68
TRIM28-210ENST00000597618 KBTBD7Q8WVZ9 684 aa10.79□□□□□ -0.68
TRIM28-210ENST00000597618 SAAL1Q96ER3 474 aa10.79□□□□□ -0.68
TRIM28-210ENST00000597618 PCED1BQ96HM7 432 aa10.79□□□□□ -0.68
TRIM28-210ENST00000597618 UBL7Q96S82 380 aaPredicted RBP10.79□□□□□ -0.68
TRIM28-210ENST00000597618 DUSP9Q99956 384 aaKnown RBP10.79□□□□□ -0.68
TRIM28-210ENST00000597618 MTMR12Q9C0I1 747 aa10.79□□□□□ -0.68
TRIM28-210ENST00000597618 IKZF4Q9H2S9 585 aa10.79□□□□□ -0.68
TRIM28-210ENST00000597618 CRTAC1Q9NQ79 661 aa10.79□□□□□ -0.68
TRIM28-210ENST00000597618 SIX4Q9UIU6 781 aa10.79□□□□□ -0.68
TRIM28-210ENST00000597618 SH3BP1Q9Y3L3 701 aa10.79□□□□□ -0.68
TRIM28-210ENST00000597618 NFE2L3Q9Y4A8 694 aa10.79□□□□□ -0.68
TRIM28-210ENST00000597618 ZNF462Q96JM2 2506 aa10.79□□□□□ -0.68
TRIM28-210ENST00000597618 A0A1B0GTW7 788 aa10.78□□□□□ -0.68
TRIM28-210ENST00000597618 MEI4A8MW99 385 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms