RNA–Protein interactions for RNA: ENST00000596399.1

LIM2-202, Transcript of lens intrinsic membrane protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIM2, Length 861 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIM2-202ENST00000596399 BEST1O76090 585 aa17.08■□□□□ 0.32
LIM2-202ENST00000596399 RHOBTB1O94844 696 aa17.08■□□□□ 0.32
LIM2-202ENST00000596399 KLF8O95600 359 aaPredicted RBP17.08■□□□□ 0.32
LIM2-202ENST00000596399 CAVIN2O95810 425 aa17.08■□□□□ 0.32
LIM2-202ENST00000596399 FAM163BP0C2L3 166 aa17.08■□□□□ 0.32
LIM2-202ENST00000596399 ZSCAN22P10073 491 aaPredicted RBP17.08■□□□□ 0.32
LIM2-202ENST00000596399 PFKLP17858 780 aa17.08■□□□□ 0.32
LIM2-202ENST00000596399 ATICP31939 592 aa17.08■□□□□ 0.32
LIM2-202ENST00000596399 PPP3CCP48454 512 aa17.08■□□□□ 0.32
LIM2-202ENST00000596399 STK4Q13043 487 aa17.08■□□□□ 0.32
LIM2-202ENST00000596399 CRY1Q16526 586 aa17.08■□□□□ 0.32
LIM2-202ENST00000596399 ZNF699Q32M78 642 aa17.08■□□□□ 0.32
LIM2-202ENST00000596399 RNF43Q68DV7 783 aa17.08■□□□□ 0.32
LIM2-202ENST00000596399 ACOT1Q86TX2 421 aa17.08■□□□□ 0.32
LIM2-202ENST00000596399 FAM35AQ86V20 835 aa17.08■□□□□ 0.32
LIM2-202ENST00000596399 RASSF3Q86WH2 238 aa17.08■□□□□ 0.32
LIM2-202ENST00000596399 C12orf56Q8IXR9 622 aa17.08■□□□□ 0.32
LIM2-202ENST00000596399 NAT16Q8N8M0 369 aa17.08■□□□□ 0.32
LIM2-202ENST00000596399 IL17RCQ8NAC3 791 aa17.08■□□□□ 0.32
LIM2-202ENST00000596399 TXNDC5Q8NBS9 432 aaKnown RBP17.08■□□□□ 0.32
LIM2-202ENST00000596399 SPRYD3Q8NCJ5 442 aa17.08■□□□□ 0.32
LIM2-202ENST00000596399 KIAA0895Q8NCT3 520 aa17.08■□□□□ 0.32
LIM2-202ENST00000596399 PARD3BQ8TEW8 1205 aa17.08■□□□□ 0.32
LIM2-202ENST00000596399 RLN3Q8WXF3 142 aa17.08■□□□□ 0.32
LIM2-202ENST00000596399 SYAP1Q96A49 352 aaPredicted RBP17.08■□□□□ 0.32
LIM2-202ENST00000596399 CHAMP1Q96JM3 812 aa17.08■□□□□ 0.32
LIM2-202ENST00000596399 SLITRK1Q96PX8 696 aa17.08■□□□□ 0.32
LIM2-202ENST00000596399 PNKPQ96T60 521 aa17.08■□□□□ 0.32
LIM2-202ENST00000596399 MED10Q9BTT4 135 aa17.08■□□□□ 0.32
LIM2-202ENST00000596399 MAGEF1Q9HAY2 307 aa17.08■□□□□ 0.32
LIM2-202ENST00000596399 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.08■□□□□ 0.32
LIM2-202ENST00000596399 EHD2Q9NZN4 543 aa17.08■□□□□ 0.32
LIM2-202ENST00000596399 HMGXB4Q9UGU5 601 aa17.08■□□□□ 0.32
LIM2-202ENST00000596399 FRYQ5TBA9 3013 aa17.08■□□□□ 0.32
LIM2-202ENST00000596399 CACNA1BQ00975 2339 aa17.08■□□□□ 0.32
LIM2-202ENST00000596399 MAP1BP46821 2468 aaKnown RBP17.07■□□□□ 0.32
LIM2-202ENST00000596399 CNOT1A5YKK6 2376 aaKnown RBP17.07■□□□□ 0.32
LIM2-202ENST00000596399 PVALEFA0A1B0GWK0 134 aa17.07■□□□□ 0.32
LIM2-202ENST00000596399 C4orf47A7E2U8 309 aa17.07■□□□□ 0.32
LIM2-202ENST00000596399 KAT7O95251 611 aa17.07■□□□□ 0.32
LIM2-202ENST00000596399 F13A1P00488 732 aa17.07■□□□□ 0.32
LIM2-202ENST00000596399 C4BPAP04003 597 aaKnown RBP17.07■□□□□ 0.32
LIM2-202ENST00000596399 CCDC130P13994 396 aa17.07■□□□□ 0.32
LIM2-202ENST00000596399 SNRPFP62306 86 aaKnown RBP17.07■□□□□ 0.32
LIM2-202ENST00000596399 NCOA4Q13772 614 aa17.07■□□□□ 0.32
LIM2-202ENST00000596399 USP39Q53GS9 565 aaKnown RBP17.07■□□□□ 0.32
LIM2-202ENST00000596399 LY6G5CQ5SRR4 150 aa17.07■□□□□ 0.32
LIM2-202ENST00000596399 PMS2CLQ68D20 193 aa17.07■□□□□ 0.32
LIM2-202ENST00000596399 FUKQ8N0W3 1084 aa17.07■□□□□ 0.32
LIM2-202ENST00000596399 EDEM2Q9BV94 578 aa17.07■□□□□ 0.32
LIM2-202ENST00000596399 FAM13BQ9NYF5 915 aa17.07■□□□□ 0.32
LIM2-202ENST00000596399 GMIPQ9P107 970 aa17.07■□□□□ 0.32
LIM2-202ENST00000596399 GIPC1O14908 333 aa17.06■□□□□ 0.32
LIM2-202ENST00000596399 TRIM24O15164 1050 aa17.06■□□□□ 0.32
LIM2-202ENST00000596399 ACTN4O43707 911 aaKnown RBP17.06■□□□□ 0.32
LIM2-202ENST00000596399 ADAM23O75077 832 aa17.06■□□□□ 0.32
LIM2-202ENST00000596399 KCNK5O95279 499 aa17.06■□□□□ 0.32
LIM2-202ENST00000596399 ADH5P11766 374 aa17.06■□□□□ 0.32
LIM2-202ENST00000596399 SLC5A3P53794 718 aa17.06■□□□□ 0.32
LIM2-202ENST00000596399 DNM1Q05193 864 aaKnown RBP17.06■□□□□ 0.32
LIM2-202ENST00000596399 ZNF667Q5HYK9 610 aa17.06■□□□□ 0.32
LIM2-202ENST00000596399 HECTD3Q5T447 861 aa17.06■□□□□ 0.32
LIM2-202ENST00000596399 SPOPLQ6IQ16 392 aa17.06■□□□□ 0.32
LIM2-202ENST00000596399 PHTF2Q8N3S3 785 aa17.06■□□□□ 0.32
LIM2-202ENST00000596399 ZMIZ2Q8NF64 920 aa17.06■□□□□ 0.32
LIM2-202ENST00000596399 DDX1Q92499 740 aaKnown RBP17.06■□□□□ 0.32
LIM2-202ENST00000596399 PAGE5Q96GU1 130 aa17.06■□□□□ 0.32
LIM2-202ENST00000596399 CNOT6LQ96LI5 555 aaKnown RBP17.06■□□□□ 0.32
LIM2-202ENST00000596399 SMOQ99835 787 aa17.06■□□□□ 0.32
LIM2-202ENST00000596399 LSM14BQ9BX40 385 aaKnown RBP17.06■□□□□ 0.32
LIM2-202ENST00000596399 VRTNQ9H8Y1 702 aa17.06■□□□□ 0.32
LIM2-202ENST00000596399 ARHGEF4Q9NR80 690 aa17.06■□□□□ 0.32
LIM2-202ENST00000596399 KRT82Q9NSB4 513 aa17.06■□□□□ 0.32
LIM2-202ENST00000596399 DMAC2Q9NW81 257 aa17.06■□□□□ 0.32
LIM2-202ENST00000596399 CIZ1Q9ULV3 898 aaPredicted RBP17.06■□□□□ 0.32
LIM2-202ENST00000596399 LNP1A1A4G5 178 aa17.05■□□□□ 0.32
LIM2-202ENST00000596399 SLC9A3R1O14745 358 aaPredicted RBP17.05■□□□□ 0.32
LIM2-202ENST00000596399 AP1G2O75843 785 aa17.05■□□□□ 0.32
LIM2-202ENST00000596399 RTN3O95197 1032 aaPredicted RBP17.05■□□□□ 0.32
LIM2-202ENST00000596399 APODP05090 189 aa17.05■□□□□ 0.32
LIM2-202ENST00000596399 IRF1P10914 325 aa17.05■□□□□ 0.32
LIM2-202ENST00000596399 PMLP29590 882 aa17.05■□□□□ 0.32
LIM2-202ENST00000596399 KIR2DL1P43626 348 aaPredicted RBP17.05■□□□□ 0.32
LIM2-202ENST00000596399 DHPSP49366 369 aaPredicted RBP17.05■□□□□ 0.32
LIM2-202ENST00000596399 CLDN10P78369 228 aa17.05■□□□□ 0.32
LIM2-202ENST00000596399 MRPS21P82921 87 aaKnown RBP17.05■□□□□ 0.32
LIM2-202ENST00000596399 ST3GAL2Q16842 350 aa17.05■□□□□ 0.32
LIM2-202ENST00000596399 KMT5BQ4FZB7 885 aa17.05■□□□□ 0.32
LIM2-202ENST00000596399 PSAPL1Q6NUJ1 521 aa17.05■□□□□ 0.32
LIM2-202ENST00000596399 ARMCX6Q7L4S7 300 aa17.05■□□□□ 0.32
LIM2-202ENST00000596399 BBS7Q8IWZ6 715 aa17.05■□□□□ 0.32
LIM2-202ENST00000596399 C12orf29Q8N999 325 aa17.05■□□□□ 0.32
LIM2-202ENST00000596399 SLC2A14Q8TDB8 520 aa17.05■□□□□ 0.32
LIM2-202ENST00000596399 ERLEC1Q96DZ1 483 aa17.05■□□□□ 0.32
LIM2-202ENST00000596399 KCTD10Q9H3F6 313 aa17.05■□□□□ 0.32
LIM2-202ENST00000596399 DMAP1Q9NPF5 467 aaPredicted RBP17.05■□□□□ 0.32
LIM2-202ENST00000596399 FAM49BQ9NUQ9 324 aa17.05■□□□□ 0.32
LIM2-202ENST00000596399 IL37Q9NZH6 218 aa17.05■□□□□ 0.32
LIM2-202ENST00000596399 CGNQ9P2M7 1197 aaKnown RBP17.05■□□□□ 0.32
LIM2-202ENST00000596399 USP24Q9UPU5 2620 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms