RNA–Protein interactions for RNA: ENST00000596172.1

ZNF558-204, Transcript of zinc finger protein 558, humanhuman

TSL 4

Gene ZNF558, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-204ENST00000596172 YAF2Q8IY57 180 aa19.25■□□□□ 0.67
ZNF558-204ENST00000596172 KIAA1958Q8N8K9 716 aa19.25■□□□□ 0.67
ZNF558-204ENST00000596172 ARL14EPQ8N8R7 260 aaPredicted RBP19.25■□□□□ 0.67
ZNF558-204ENST00000596172 PBXIP1Q96AQ6 731 aa19.25■□□□□ 0.67
ZNF558-204ENST00000596172 BRD9Q9H8M2 597 aa19.25■□□□□ 0.67
ZNF558-204ENST00000596172 TLR8Q9NR97 1041 aaKnown RBP19.25■□□□□ 0.67
ZNF558-204ENST00000596172 THG1LQ9NWX6 298 aaKnown RBP19.25■□□□□ 0.67
ZNF558-204ENST00000596172 ARHGAP26Q9UNA1 814 aa19.25■□□□□ 0.67
ZNF558-204ENST00000596172 LGALS16A8MUM7 142 aa19.24■□□□□ 0.67
ZNF558-204ENST00000596172 BECN2A8MW95 431 aa19.24■□□□□ 0.67
ZNF558-204ENST00000596172 ARNTLO00327 626 aa19.24■□□□□ 0.67
ZNF558-204ENST00000596172 CKMP06732 381 aa19.24■□□□□ 0.67
ZNF558-204ENST00000596172 GDI1P31150 447 aa19.24■□□□□ 0.67
ZNF558-204ENST00000596172 PLA2G4AP47712 749 aa19.24■□□□□ 0.67
ZNF558-204ENST00000596172 MLLT6P55198 1093 aaPredicted RBP19.24■□□□□ 0.67
ZNF558-204ENST00000596172 PLCB2Q00722 1185 aa19.24■□□□□ 0.67
ZNF558-204ENST00000596172 IQCB1Q15051 598 aa19.24■□□□□ 0.67
ZNF558-204ENST00000596172 ARHGAP44Q17R89 818 aa19.24■□□□□ 0.67
ZNF558-204ENST00000596172 SLC44A4Q53GD3 710 aa19.24■□□□□ 0.67
ZNF558-204ENST00000596172 HECTD3Q5T447 861 aa19.24■□□□□ 0.67
ZNF558-204ENST00000596172 GPIHBP1Q8IV16 184 aa19.24■□□□□ 0.67
ZNF558-204ENST00000596172 ZNF276Q8N554 614 aa19.24■□□□□ 0.67
ZNF558-204ENST00000596172 SLC35F5Q8WV83 523 aa19.24■□□□□ 0.67
ZNF558-204ENST00000596172 KCTD13Q8WZ19 329 aa19.24■□□□□ 0.67
ZNF558-204ENST00000596172 NAA15Q9BXJ9 866 aaKnown RBP19.24■□□□□ 0.67
ZNF558-204ENST00000596172 RNF38Q9H0F5 515 aa19.24■□□□□ 0.67
ZNF558-204ENST00000596172 SMG9Q9H0W8 520 aaKnown RBP19.24■□□□□ 0.67
ZNF558-204ENST00000596172 GMIPQ9P107 970 aa19.24■□□□□ 0.67
ZNF558-204ENST00000596172 CCL26Q9Y258 94 aa19.24■□□□□ 0.67
ZNF558-204ENST00000596172 DAAM1Q9Y4D1 1078 aa19.24■□□□□ 0.67
ZNF558-204ENST00000596172 KRBA1A5PL33 1030 aa19.23■□□□□ 0.67
ZNF558-204ENST00000596172 MED7O43513 233 aa19.23■□□□□ 0.67
ZNF558-204ENST00000596172 ABL1P00519 1130 aa19.23■□□□□ 0.67
ZNF558-204ENST00000596172 UCHL3P15374 230 aa19.23■□□□□ 0.67
ZNF558-204ENST00000596172 BRD2P25440 801 aaKnown RBP19.23■□□□□ 0.67
ZNF558-204ENST00000596172 PSEN1P49768 467 aa19.23■□□□□ 0.67
ZNF558-204ENST00000596172 PRKCQQ04759 706 aa19.23■□□□□ 0.67
ZNF558-204ENST00000596172 PM20D1Q6GTS8 502 aa19.23■□□□□ 0.67
ZNF558-204ENST00000596172 FAM71AQ8IYT1 594 aa19.23■□□□□ 0.67
ZNF558-204ENST00000596172 SIX5Q8N196 739 aa19.23■□□□□ 0.67
ZNF558-204ENST00000596172 FBXL6Q8N531 539 aa19.23■□□□□ 0.67
ZNF558-204ENST00000596172 UBA3Q8TBC4 463 aa19.23■□□□□ 0.67
ZNF558-204ENST00000596172 ZNF606Q8WXB4 792 aa19.23■□□□□ 0.67
ZNF558-204ENST00000596172 SHDQ96IW2 340 aa19.23■□□□□ 0.67
ZNF558-204ENST00000596172 ARHGEF3Q9NR81 526 aa19.23■□□□□ 0.67
ZNF558-204ENST00000596172 AJAP1Q9UKB5 411 aaPredicted RBP19.23■□□□□ 0.67
ZNF558-204ENST00000596172 FOXN3O00409 490 aaPredicted RBP19.22■□□□□ 0.67
ZNF558-204ENST00000596172 ATP1A3P13637 1013 aa19.22■□□□□ 0.67
ZNF558-204ENST00000596172 GLULP15104 373 aa19.22■□□□□ 0.67
ZNF558-204ENST00000596172 STARD6P59095 220 aa19.22■□□□□ 0.67
ZNF558-204ENST00000596172 ZNF77Q15935 545 aa19.22■□□□□ 0.67
ZNF558-204ENST00000596172 SCML4Q8N228 414 aa19.22■□□□□ 0.67
ZNF558-204ENST00000596172 HSFY1Q96LI6 401 aa19.22■□□□□ 0.67
ZNF558-204ENST00000596172 ERGIC2Q96RQ1 377 aa19.22■□□□□ 0.67
ZNF558-204ENST00000596172 FAM83CQ9BQN1 747 aa19.22■□□□□ 0.67
ZNF558-204ENST00000596172 LSM14BQ9BX40 385 aaKnown RBP19.22■□□□□ 0.67
ZNF558-204ENST00000596172 STK33Q9BYT3 514 aa19.22■□□□□ 0.67
ZNF558-204ENST00000596172 CYLDQ9NQC7 956 aa19.22■□□□□ 0.67
ZNF558-204ENST00000596172 CLIC5Q9NZA1 410 aa19.22■□□□□ 0.67
ZNF558-204ENST00000596172 SIK3Q9Y2K2 1263 aa19.22■□□□□ 0.67
ZNF558-204ENST00000596172 DENND4CQ5VZ89 1909 aa19.21■□□□□ 0.67
ZNF558-204ENST00000596172 M0QYV0 167 aa19.21■□□□□ 0.67
ZNF558-204ENST00000596172 TULP2O00295 520 aa19.21■□□□□ 0.67
ZNF558-204ENST00000596172 CYP26A1O43174 497 aa19.21■□□□□ 0.67
ZNF558-204ENST00000596172 COCHO43405 550 aa19.21■□□□□ 0.67
ZNF558-204ENST00000596172 GNA15P30679 374 aa19.21■□□□□ 0.67
ZNF558-204ENST00000596172 USP8P40818 1118 aa19.21■□□□□ 0.67
ZNF558-204ENST00000596172 RPL34P49207 117 aaKnown RBP19.21■□□□□ 0.67
ZNF558-204ENST00000596172 PGFP49763 221 aa19.21■□□□□ 0.67
ZNF558-204ENST00000596172 CLCN5P51795 746 aa19.21■□□□□ 0.67
ZNF558-204ENST00000596172 TKTL1P51854 596 aa19.21■□□□□ 0.67
ZNF558-204ENST00000596172 BPIFB4P59827 614 aa19.21■□□□□ 0.67
ZNF558-204ENST00000596172 PTK2Q05397 1052 aa19.21■□□□□ 0.67
ZNF558-204ENST00000596172 USP4Q13107 963 aa19.21■□□□□ 0.67
ZNF558-204ENST00000596172 DRAP1Q14919 205 aaPredicted RBP19.21■□□□□ 0.67
ZNF558-204ENST00000596172 NFKBIBQ15653 356 aa19.21■□□□□ 0.67
ZNF558-204ENST00000596172 MLF2Q15773 248 aaPredicted RBP19.21■□□□□ 0.67
ZNF558-204ENST00000596172 KLHDC10Q6PID8 442 aa19.21■□□□□ 0.67
ZNF558-204ENST00000596172 ARHGAP18Q8N392 663 aa19.21■□□□□ 0.67
ZNF558-204ENST00000596172 SH3RF2Q8TEC5 729 aa19.21■□□□□ 0.67
ZNF558-204ENST00000596172 STK32AQ8WU08 396 aa19.21■□□□□ 0.67
ZNF558-204ENST00000596172 DDX23Q9BUQ8 820 aaKnown RBP19.21■□□□□ 0.67
ZNF558-204ENST00000596172 GANQ9H2C0 597 aa19.21■□□□□ 0.67
ZNF558-204ENST00000596172 LRRC4Q9HBW1 653 aa19.21■□□□□ 0.67
ZNF558-204ENST00000596172 CA14Q9ULX7 337 aa19.21■□□□□ 0.67
ZNF558-204ENST00000596172 FHOD1Q9Y613 1164 aa19.21■□□□□ 0.67
ZNF558-204ENST00000596172 NUP210Q8TEM1 1887 aaPredicted RBP19.2■□□□□ 0.66
ZNF558-204ENST00000596172 TLR5O60602 858 aa19.2■□□□□ 0.66
ZNF558-204ENST00000596172 ZBED1O96006 694 aa19.2■□□□□ 0.66
ZNF558-204ENST00000596172 PDGFBP01127 241 aaPredicted RBP19.2■□□□□ 0.66
ZNF558-204ENST00000596172 CALCAP01258 141 aa19.2■□□□□ 0.66
ZNF558-204ENST00000596172 CLCN1P35523 988 aa19.2■□□□□ 0.66
ZNF558-204ENST00000596172 GPD2P43304 727 aa19.2■□□□□ 0.66
ZNF558-204ENST00000596172 ZXDBP98169 803 aa19.2■□□□□ 0.66
ZNF558-204ENST00000596172 UBXN1Q04323 297 aa19.2■□□□□ 0.66
ZNF558-204ENST00000596172 PMF1Q6P1K2 205 aa19.2■□□□□ 0.66
ZNF558-204ENST00000596172 CC2D1AQ6P1N0 951 aaPredicted RBP19.2■□□□□ 0.66
ZNF558-204ENST00000596172 SCD5Q86SK9 330 aa19.2■□□□□ 0.66
ZNF558-204ENST00000596172 DDX42Q86XP3 938 aaKnown RBP eCLIP19.2■□□□□ 0.66
ZNF558-204ENST00000596172 RIN3Q8TB24 985 aa19.2■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms