RNA–Protein interactions for RNA: ENST00000595803.5

SHKBP1-209, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 773 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-209ENST00000595803 RWDD3Q9Y3V2 267 aa13.74□□□□□ -0.21
SHKBP1-209ENST00000595803 JRKLQ9Y4A0 524 aa13.74□□□□□ -0.21
SHKBP1-209ENST00000595803 PTPRZ1P23471 2315 aaPredicted RBP13.74□□□□□ -0.21
SHKBP1-209ENST00000595803 PLXNA3P51805 1871 aa13.74□□□□□ -0.21
SHKBP1-209ENST00000595803 COL4A6Q14031 1691 aa13.73□□□□□ -0.21
SHKBP1-209ENST00000595803 TBC1D4O60343 1298 aa13.73□□□□□ -0.21
SHKBP1-209ENST00000595803 BUB1BO60566 1050 aaPredicted RBP13.73□□□□□ -0.21
SHKBP1-209ENST00000595803 BEST1O76090 585 aa13.73□□□□□ -0.21
SHKBP1-209ENST00000595803 URODP06132 367 aa13.73□□□□□ -0.21
SHKBP1-209ENST00000595803 BMPR1AP36894 532 aa13.73□□□□□ -0.21
SHKBP1-209ENST00000595803 RPL34P49207 117 aaKnown RBP13.73□□□□□ -0.21
SHKBP1-209ENST00000595803 GSCP56915 257 aaPredicted RBP13.73□□□□□ -0.21
SHKBP1-209ENST00000595803 ERVK-21P61565 698 aa13.73□□□□□ -0.21
SHKBP1-209ENST00000595803 SLC6A3Q01959 620 aa13.73□□□□□ -0.21
SHKBP1-209ENST00000595803 DSG1Q02413 1049 aa13.73□□□□□ -0.21
SHKBP1-209ENST00000595803 GPR17Q13304 367 aa13.73□□□□□ -0.21
SHKBP1-209ENST00000595803 LLGL2Q6P1M3 1020 aa13.73□□□□□ -0.21
SHKBP1-209ENST00000595803 PEX26Q7Z412 305 aa13.73□□□□□ -0.21
SHKBP1-209ENST00000595803 SCN4BQ8IWT1 228 aa13.73□□□□□ -0.21
SHKBP1-209ENST00000595803 SUGP1Q8IWZ8 645 aaKnown RBP13.73□□□□□ -0.21
SHKBP1-209ENST00000595803 SCUBE3Q8IX30 993 aa13.73□□□□□ -0.21
SHKBP1-209ENST00000595803 VPS52Q8N1B4 723 aa13.73□□□□□ -0.21
SHKBP1-209ENST00000595803 KLHL23Q8NBE8 558 aa13.73□□□□□ -0.21
SHKBP1-209ENST00000595803 FBXO22Q8NEZ5 403 aa13.73□□□□□ -0.21
SHKBP1-209ENST00000595803 C2orf15Q8WU43 125 aaKnown RBP13.73□□□□□ -0.21
SHKBP1-209ENST00000595803 UBE2Q2Q8WVN8 375 aa13.73□□□□□ -0.21
SHKBP1-209ENST00000595803 CLP1Q92989 425 aaKnown RBP13.73□□□□□ -0.21
SHKBP1-209ENST00000595803 FUBP3Q96I24 572 aaKnown RBP eCLIP13.73□□□□□ -0.21
SHKBP1-209ENST00000595803 TGS1Q96RS0 853 aaKnown RBP13.73□□□□□ -0.21
SHKBP1-209ENST00000595803 KCNK16Q96T55 309 aa13.73□□□□□ -0.21
SHKBP1-209ENST00000595803 VN1R3Q9BXE9 311 aa13.73□□□□□ -0.21
SHKBP1-209ENST00000595803 CSNK1G1Q9HCP0 422 aa13.73□□□□□ -0.21
SHKBP1-209ENST00000595803 DMAP1Q9NPF5 467 aaPredicted RBP13.73□□□□□ -0.21
SHKBP1-209ENST00000595803 MRPL17Q9NRX2 175 aaKnown RBP13.73□□□□□ -0.21
SHKBP1-209ENST00000595803 ABI2Q9NYB9 513 aaPredicted RBP13.73□□□□□ -0.21
SHKBP1-209ENST00000595803 MTRRQ9UBK8 725 aa13.73□□□□□ -0.21
SHKBP1-209ENST00000595803 TJP2Q9UDY2 1190 aa13.73□□□□□ -0.21
SHKBP1-209ENST00000595803 IP6K2Q9UHH9 426 aa13.73□□□□□ -0.21
SHKBP1-209ENST00000595803 LCMT1Q9UIC8 334 aa13.73□□□□□ -0.21
SHKBP1-209ENST00000595803 ANAPC7Q9UJX3 599 aa13.73□□□□□ -0.21
SHKBP1-209ENST00000595803 PCDHGC5Q9Y5F6 944 aa13.73□□□□□ -0.21
SHKBP1-209ENST00000595803 TCRBV5S1A1TA0A578 114 aa13.72□□□□□ -0.21
SHKBP1-209ENST00000595803 TMEM191CA6NGB0 347 aa13.72□□□□□ -0.21
SHKBP1-209ENST00000595803 URI1O94763 535 aaPredicted RBP13.72□□□□□ -0.21
SHKBP1-209ENST00000595803 GJB6O95452 261 aa13.72□□□□□ -0.21
SHKBP1-209ENST00000595803 CYP2F1P24903 491 aa13.72□□□□□ -0.21
SHKBP1-209ENST00000595803 OR1D2P34982 312 aa13.72□□□□□ -0.21
SHKBP1-209ENST00000595803 CTNNB1P35222 781 aa13.72□□□□□ -0.21
SHKBP1-209ENST00000595803 RNASE9P60153 205 aaKnown RBP13.72□□□□□ -0.21
SHKBP1-209ENST00000595803 FAM102AQ5T9C2 384 aaPredicted RBP13.72□□□□□ -0.21
SHKBP1-209ENST00000595803 VSTM1Q6UX27 236 aa13.72□□□□□ -0.21
SHKBP1-209ENST00000595803 RSPO2Q6UXX9 243 aaPredicted RBP13.72□□□□□ -0.21
SHKBP1-209ENST00000595803 FAM183BPQ6ZVS7 135 aa13.72□□□□□ -0.21
SHKBP1-209ENST00000595803 SLFN11Q7Z7L1 901 aa13.72□□□□□ -0.21
SHKBP1-209ENST00000595803 SIX6OS1Q8N1H7 587 aa13.72□□□□□ -0.21
SHKBP1-209ENST00000595803 ZMIZ2Q8NF64 920 aa13.72□□□□□ -0.21
SHKBP1-209ENST00000595803 SPPL2BQ8TCT7 592 aa13.72□□□□□ -0.21
SHKBP1-209ENST00000595803 EDAQ92838 391 aa13.72□□□□□ -0.21
SHKBP1-209ENST00000595803 PBXIP1Q96AQ6 731 aa13.72□□□□□ -0.21
SHKBP1-209ENST00000595803 BTBD6Q96KE9 485 aa13.72□□□□□ -0.21
SHKBP1-209ENST00000595803 PGLYRP2Q96PD5 576 aa13.72□□□□□ -0.21
SHKBP1-209ENST00000595803 ALG6Q9Y672 507 aa13.72□□□□□ -0.21
SHKBP1-209ENST00000595803 CDY1Q9Y6F8 540 aa13.72□□□□□ -0.21
SHKBP1-209ENST00000595803 DMDP11532 3685 aa13.72□□□□□ -0.21
SHKBP1-209ENST00000595803 VPS13AQ96RL7 3174 aa13.72□□□□□ -0.21
SHKBP1-209ENST00000595803 EPG5Q9HCE0 2579 aa13.71□□□□□ -0.21
SHKBP1-209ENST00000595803 LINC01553A4QN01 128 aa13.71□□□□□ -0.21
SHKBP1-209ENST00000595803 TMEM221A6NGB7 291 aa13.71□□□□□ -0.21
SHKBP1-209ENST00000595803 M0R296 226 aa13.71□□□□□ -0.21
SHKBP1-209ENST00000595803 ENC1O14682 589 aa13.71□□□□□ -0.21
SHKBP1-209ENST00000595803 TRIM66O15016 1216 aa13.71□□□□□ -0.21
SHKBP1-209ENST00000595803 PAPSS1O43252 624 aaPredicted RBP13.71□□□□□ -0.21
SHKBP1-209ENST00000595803 GABBR2O75899 941 aa13.71□□□□□ -0.21
SHKBP1-209ENST00000595803 KRT37O76014 449 aa13.71□□□□□ -0.21
SHKBP1-209ENST00000595803 FBXO21O94952 628 aa13.71□□□□□ -0.21
SHKBP1-209ENST00000595803 CXCL14O95715 111 aa13.71□□□□□ -0.21
SHKBP1-209ENST00000595803 FTCDO95954 541 aa13.71□□□□□ -0.21
SHKBP1-209ENST00000595803 RPL17P18621 184 aaKnown RBP13.71□□□□□ -0.21
SHKBP1-209ENST00000595803 CA8P35219 290 aa13.71□□□□□ -0.21
SHKBP1-209ENST00000595803 SLC1A1P43005 524 aa13.71□□□□□ -0.21
SHKBP1-209ENST00000595803 MAGEA11P43364 429 aa13.71□□□□□ -0.21
SHKBP1-209ENST00000595803 TKTL1P51854 596 aa13.71□□□□□ -0.21
SHKBP1-209ENST00000595803 CACNA2D1P54289 1103 aa13.71□□□□□ -0.21
SHKBP1-209ENST00000595803 CREMQ03060 361 aa13.71□□□□□ -0.21
SHKBP1-209ENST00000595803 RPS6KA1Q15418 735 aa13.71□□□□□ -0.21
SHKBP1-209ENST00000595803 CFAP221Q4G0U5 840 aa13.71□□□□□ -0.21
SHKBP1-209ENST00000595803 EFHC1Q5JVL4 640 aa13.71□□□□□ -0.21
SHKBP1-209ENST00000595803 PPP1R15BQ5SWA1 713 aa13.71□□□□□ -0.21
SHKBP1-209ENST00000595803 MEI1Q5TIA1 1274 aa13.71□□□□□ -0.21
SHKBP1-209ENST00000595803 SLC8B1Q6J4K2 584 aa13.71□□□□□ -0.21
SHKBP1-209ENST00000595803 C11orf63Q6NUN7 778 aa13.71□□□□□ -0.21
SHKBP1-209ENST00000595803 RNF19BQ6ZMZ0 732 aa13.71□□□□□ -0.21
SHKBP1-209ENST00000595803 EP400NLQ6ZTU2 488 aa13.71□□□□□ -0.21
SHKBP1-209ENST00000595803 GPR65Q8IYL9 337 aa13.71□□□□□ -0.21
SHKBP1-209ENST00000595803 LRRC57Q8N9N7 239 aa13.71□□□□□ -0.21
SHKBP1-209ENST00000595803 ATAD1Q8NBU5 361 aa13.71□□□□□ -0.21
SHKBP1-209ENST00000595803 ATOH1Q92858 354 aaPredicted RBP13.71□□□□□ -0.21
SHKBP1-209ENST00000595803 MCEEQ96PE7 176 aa13.71□□□□□ -0.21
SHKBP1-209ENST00000595803 PLVAPQ9BX97 442 aa13.71□□□□□ -0.21
SHKBP1-209ENST00000595803 RHOBTB2Q9BYZ6 727 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms