RNA–Protein interactions for RNA: ENST00000595523.5

SHKBP1-206, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 4

Gene SHKBP1, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-206ENST00000595523 SH3RF2Q8TEC5 729 aa11.61□□□□□ -0.55
SHKBP1-206ENST00000595523 TFAP2BQ92481 460 aa11.61□□□□□ -0.55
SHKBP1-206ENST00000595523 ZFRQ96KR1 1074 aaKnown RBP11.61□□□□□ -0.55
SHKBP1-206ENST00000595523 CCSER2Q9H7U1 834 aa11.61□□□□□ -0.55
SHKBP1-206ENST00000595523 GKN1Q9NS71 199 aa11.61□□□□□ -0.55
SHKBP1-206ENST00000595523 SAMSN1Q9NSI8 373 aaKnown RBP11.61□□□□□ -0.55
SHKBP1-206ENST00000595523 COMMD8Q9NX08 183 aa11.61□□□□□ -0.55
SHKBP1-206ENST00000595523 OSER1Q9NX31 292 aa11.61□□□□□ -0.55
SHKBP1-206ENST00000595523 TMEM63CQ9P1W3 806 aa11.61□□□□□ -0.55
SHKBP1-206ENST00000595523 SIT1Q9Y3P8 196 aa11.61□□□□□ -0.55
SHKBP1-206ENST00000595523 FAM170BA6NMN3 283 aa11.6□□□□□ -0.55
SHKBP1-206ENST00000595523 TULP2O00295 520 aa11.6□□□□□ -0.55
SHKBP1-206ENST00000595523 O00370 1275 aa11.6□□□□□ -0.55
SHKBP1-206ENST00000595523 COCHO43405 550 aa11.6□□□□□ -0.55
SHKBP1-206ENST00000595523 MBD3O95983 291 aa11.6□□□□□ -0.55
SHKBP1-206ENST00000595523 ABL1P00519 1130 aa11.6□□□□□ -0.55
SHKBP1-206ENST00000595523 ARSAP15289 507 aa11.6□□□□□ -0.55
SHKBP1-206ENST00000595523 SLC9A1P19634 815 aa11.6□□□□□ -0.55
SHKBP1-206ENST00000595523 RFX1P22670 979 aa11.6□□□□□ -0.55
SHKBP1-206ENST00000595523 CTHP32929 405 aa11.6□□□□□ -0.55
SHKBP1-206ENST00000595523 KIF11P52732 1056 aa11.6□□□□□ -0.55
SHKBP1-206ENST00000595523 NUBP1P53384 320 aa11.6□□□□□ -0.55
SHKBP1-206ENST00000595523 MLLT6P55198 1093 aaPredicted RBP11.6□□□□□ -0.55
SHKBP1-206ENST00000595523 YWHAEP62258 255 aaKnown RBP11.6□□□□□ -0.55
SHKBP1-206ENST00000595523 PLCB2Q00722 1185 aa11.6□□□□□ -0.55
SHKBP1-206ENST00000595523 CETN1Q12798 172 aa11.6□□□□□ -0.55
SHKBP1-206ENST00000595523 GOLGA7BQ2TAP0 167 aa11.6□□□□□ -0.55
SHKBP1-206ENST00000595523 PKDCCQ504Y2 493 aa11.6□□□□□ -0.55
SHKBP1-206ENST00000595523 CT47A1Q5JQC4 288 aaPredicted RBP11.6□□□□□ -0.55
SHKBP1-206ENST00000595523 RAB41Q5JT25 222 aa11.6□□□□□ -0.55
SHKBP1-206ENST00000595523 DPY19L2P1Q6NXN4 242 aa11.6□□□□□ -0.55
SHKBP1-206ENST00000595523 GJB7Q6PEY0 223 aa11.6□□□□□ -0.55
SHKBP1-206ENST00000595523 TRIM65Q6PJ69 517 aa11.6□□□□□ -0.55
SHKBP1-206ENST00000595523 ZNF852Q6ZMS4 543 aa11.6□□□□□ -0.55
SHKBP1-206ENST00000595523 CREBRFQ8IUR6 639 aa11.6□□□□□ -0.55
SHKBP1-206ENST00000595523 ANKRD52Q8NB46 1076 aa11.6□□□□□ -0.55
SHKBP1-206ENST00000595523 DTWD2Q8NBA8 298 aa11.6□□□□□ -0.55
SHKBP1-206ENST00000595523 CSGALNACT1Q8TDX6 532 aa11.6□□□□□ -0.55
SHKBP1-206ENST00000595523 OSBPL6Q9BZF3 934 aa11.6□□□□□ -0.55
SHKBP1-206ENST00000595523 EBF3Q9H4W6 596 aa11.6□□□□□ -0.55
SHKBP1-206ENST00000595523 NMUR1Q9HB89 426 aa11.6□□□□□ -0.55
SHKBP1-206ENST00000595523 SIX2Q9NPC8 291 aa11.6□□□□□ -0.55
SHKBP1-206ENST00000595523 DACH1Q9UI36 760 aa11.6□□□□□ -0.55
SHKBP1-206ENST00000595523 AJAP1Q9UKB5 411 aaPredicted RBP11.6□□□□□ -0.55
SHKBP1-206ENST00000595523 TSPAN16Q9UKR8 245 aa11.6□□□□□ -0.55
SHKBP1-206ENST00000595523 CNTN6Q9UQ52 1028 aa11.6□□□□□ -0.55
SHKBP1-206ENST00000595523 SCML2Q9UQR0 700 aa11.6□□□□□ -0.55
SHKBP1-206ENST00000595523 PCDHB4Q9Y5E5 795 aa11.6□□□□□ -0.55
SHKBP1-206ENST00000595523 CPQQ9Y646 472 aa11.6□□□□□ -0.55
SHKBP1-206ENST00000595523 WNT6Q9Y6F9 365 aa11.6□□□□□ -0.55
SHKBP1-206ENST00000595523 USP3Q9Y6I4 520 aa11.6□□□□□ -0.55
SHKBP1-206ENST00000595523 GTPBP10A4D1E9 387 aaKnown RBP11.59□□□□□ -0.55
SHKBP1-206ENST00000595523 SPECC1L-ADORA2AF8WAN1 911 aa11.59□□□□□ -0.55
SHKBP1-206ENST00000595523 LEFTY2O00292 366 aa11.59□□□□□ -0.55
SHKBP1-206ENST00000595523 PAEPP09466 180 aa11.59□□□□□ -0.55
SHKBP1-206ENST00000595523 VDRP11473 427 aa11.59□□□□□ -0.55
SHKBP1-206ENST00000595523 CD19P15391 556 aa11.59□□□□□ -0.55
SHKBP1-206ENST00000595523 PON1P27169 355 aa11.59□□□□□ -0.55
SHKBP1-206ENST00000595523 MTIF2P46199 727 aaKnown RBP11.59□□□□□ -0.55
SHKBP1-206ENST00000595523 TUBP50607 506 aa11.59□□□□□ -0.55
SHKBP1-206ENST00000595523 PDE6CP51160 858 aa11.59□□□□□ -0.55
SHKBP1-206ENST00000595523 NHLH1Q02575 133 aa11.59□□□□□ -0.55
SHKBP1-206ENST00000595523 PDE4CQ08493 712 aa11.59□□□□□ -0.55
SHKBP1-206ENST00000595523 MAN2A1Q16706 1144 aa11.59□□□□□ -0.55
SHKBP1-206ENST00000595523 TPD52L1Q16890 204 aaPredicted RBP11.59□□□□□ -0.55
SHKBP1-206ENST00000595523 EML3Q32P44 896 aa11.59□□□□□ -0.55
SHKBP1-206ENST00000595523 ITPRIPL2Q3MIP1 535 aa11.59□□□□□ -0.55
SHKBP1-206ENST00000595523 SGO2Q562F6 1265 aa11.59□□□□□ -0.55
SHKBP1-206ENST00000595523 CCDC183Q5T5S1 534 aa11.59□□□□□ -0.55
SHKBP1-206ENST00000595523 CDKAL1Q5VV42 579 aa11.59□□□□□ -0.55
SHKBP1-206ENST00000595523 BHLHA9Q7RTU4 235 aa11.59□□□□□ -0.55
SHKBP1-206ENST00000595523 SCD5Q86SK9 330 aa11.59□□□□□ -0.55
SHKBP1-206ENST00000595523 PIGZQ86VD9 579 aa11.59□□□□□ -0.55
SHKBP1-206ENST00000595523 RBBP8NLQ8NC74 664 aaPredicted RBP11.59□□□□□ -0.55
SHKBP1-206ENST00000595523 TTC16Q8NEE8 873 aa11.59□□□□□ -0.55
SHKBP1-206ENST00000595523 OSCP1Q8WVF1 389 aa11.59□□□□□ -0.55
SHKBP1-206ENST00000595523 FAM3CQ92520 227 aa11.59□□□□□ -0.55
SHKBP1-206ENST00000595523 WBP2Q969T9 261 aa11.59□□□□□ -0.55
SHKBP1-206ENST00000595523 CLDN23Q96B33 292 aa11.59□□□□□ -0.55
SHKBP1-206ENST00000595523 PRRX2Q99811 253 aa11.59□□□□□ -0.55
SHKBP1-206ENST00000595523 UBXN6Q9BZV1 441 aa11.59□□□□□ -0.55
SHKBP1-206ENST00000595523 DNAI2Q9GZS0 605 aa11.59□□□□□ -0.55
SHKBP1-206ENST00000595523 FBXO44Q9H4M3 255 aa11.59□□□□□ -0.55
SHKBP1-206ENST00000595523 UBE2TQ9NPD8 197 aaPredicted RBP11.59□□□□□ -0.55
SHKBP1-206ENST00000595523 THG1LQ9NWX6 298 aaKnown RBP11.59□□□□□ -0.55
SHKBP1-206ENST00000595523 SMPD4Q9NXE4 827 aa11.59□□□□□ -0.55
SHKBP1-206ENST00000595523 NDRG2Q9UN36 371 aaKnown RBP11.59□□□□□ -0.55
SHKBP1-206ENST00000595523 NFE2L3Q9Y4A8 694 aa11.59□□□□□ -0.55
SHKBP1-206ENST00000595523 EML5Q05BV3 1969 aa11.59□□□□□ -0.55
SHKBP1-206ENST00000595523 FAM186AA6NE01 2351 aa11.59□□□□□ -0.55
SHKBP1-206ENST00000595523 A0A1W2PQH9 124 aa11.58□□□□□ -0.56
SHKBP1-206ENST00000595523 BECN2A8MW95 431 aa11.58□□□□□ -0.56
SHKBP1-206ENST00000595523 KCNJ18B7U540 433 aa11.58□□□□□ -0.56
SHKBP1-206ENST00000595523 H0Y858 1186 aa11.58□□□□□ -0.56
SHKBP1-206ENST00000595523 MAN2B1O00754 1011 aa11.58□□□□□ -0.56
SHKBP1-206ENST00000595523 SCAMP3O14828 347 aaKnown RBP11.58□□□□□ -0.56
SHKBP1-206ENST00000595523 TLR5O60602 858 aa11.58□□□□□ -0.56
SHKBP1-206ENST00000595523 GABBR2O75899 941 aa11.58□□□□□ -0.56
SHKBP1-206ENST00000595523 TBX18O95935 607 aa11.58□□□□□ -0.56
SHKBP1-206ENST00000595523 MBL2P11226 248 aaPredicted RBP11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms