RNA–Protein interactions for RNA: ENST00000595242.3

SCAF1-202, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 463 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-202ENST00000595242 PRB1P04280 392 aa13.7□□□□□ -0.22
SCAF1-202ENST00000595242 KRT18P05783 430 aaKnown RBP13.7□□□□□ -0.22
SCAF1-202ENST00000595242 TNNT1P13805 278 aa13.7□□□□□ -0.22
SCAF1-202ENST00000595242 GUCY2CP25092 1073 aa13.7□□□□□ -0.22
SCAF1-202ENST00000595242 CDC25CP30307 473 aa13.7□□□□□ -0.22
SCAF1-202ENST00000595242 CASP14P31944 242 aa13.7□□□□□ -0.22
SCAF1-202ENST00000595242 AVPR1AP37288 418 aa13.7□□□□□ -0.22
SCAF1-202ENST00000595242 PTGER3P43115 390 aa13.7□□□□□ -0.22
SCAF1-202ENST00000595242 ZNF131P52739 623 aa13.7□□□□□ -0.22
SCAF1-202ENST00000595242 ADKP55263 362 aaKnown RBP13.7□□□□□ -0.22
SCAF1-202ENST00000595242 FKBP3Q00688 224 aaKnown RBP13.7□□□□□ -0.22
SCAF1-202ENST00000595242 GOLGA8FQ08AF8 430 aa13.7□□□□□ -0.22
SCAF1-202ENST00000595242 GOLGA8DPQ0D2H9 430 aa13.7□□□□□ -0.22
SCAF1-202ENST00000595242 BFSP1Q12934 665 aa13.7□□□□□ -0.22
SCAF1-202ENST00000595242 PPP2R5AQ15172 486 aa13.7□□□□□ -0.22
SCAF1-202ENST00000595242 RINT1Q6NUQ1 792 aa13.7□□□□□ -0.22
SCAF1-202ENST00000595242 ADAMTS14Q8WXS8 1223 aa13.7□□□□□ -0.22
SCAF1-202ENST00000595242 USP13Q92995 863 aaPredicted RBP13.7□□□□□ -0.22
SCAF1-202ENST00000595242 CD101Q93033 1021 aa13.7□□□□□ -0.22
SCAF1-202ENST00000595242 C16orf45Q96MC5 204 aaPredicted RBP13.7□□□□□ -0.22
SCAF1-202ENST00000595242 ACAP3Q96P50 834 aa13.7□□□□□ -0.22
SCAF1-202ENST00000595242 GCNAQ96QF7 691 aa13.7□□□□□ -0.22
SCAF1-202ENST00000595242 LPIN3Q9BQK8 851 aa13.7□□□□□ -0.22
SCAF1-202ENST00000595242 NUP58Q9BVL2 599 aa13.7□□□□□ -0.22
SCAF1-202ENST00000595242 RUSC1Q9BVN2 902 aa13.7□□□□□ -0.22
SCAF1-202ENST00000595242 FGFBP2Q9BYJ0 223 aa13.7□□□□□ -0.22
SCAF1-202ENST00000595242 CDT1Q9H211 546 aa13.7□□□□□ -0.22
SCAF1-202ENST00000595242 IL21Q9HBE4 155 aa13.7□□□□□ -0.22
SCAF1-202ENST00000595242 FSCN3Q9NQT6 498 aa13.7□□□□□ -0.22
SCAF1-202ENST00000595242 CNTN3Q9P232 1028 aa13.7□□□□□ -0.22
SCAF1-202ENST00000595242 A0A1W2PQJ5 194 aa13.69□□□□□ -0.22
SCAF1-202ENST00000595242 OR6C75A6NL08 312 aa13.69□□□□□ -0.22
SCAF1-202ENST00000595242 K7ERI5 159 aa13.69□□□□□ -0.22
SCAF1-202ENST00000595242 ZSCAN12O43309 604 aa13.69□□□□□ -0.22
SCAF1-202ENST00000595242 OPHN1O60890 802 aa13.69□□□□□ -0.22
SCAF1-202ENST00000595242 GNA14O95837 355 aa13.69□□□□□ -0.22
SCAF1-202ENST00000595242 CFIP05156 583 aa13.69□□□□□ -0.22
SCAF1-202ENST00000595242 MTIF2P46199 727 aaKnown RBP13.69□□□□□ -0.22
SCAF1-202ENST00000595242 HNRNPDQ14103 355 aaKnown RBP13.69□□□□□ -0.22
SCAF1-202ENST00000595242 PDGFRLQ15198 375 aa13.69□□□□□ -0.22
SCAF1-202ENST00000595242 TRIP6Q15654 476 aaKnown RBP13.69□□□□□ -0.22
SCAF1-202ENST00000595242 NFIL3Q16649 462 aa13.69□□□□□ -0.22
SCAF1-202ENST00000595242 ZNF568Q3ZCX4 644 aa13.69□□□□□ -0.22
SCAF1-202ENST00000595242 C2orf27AQ580R0 203 aa13.69□□□□□ -0.22
SCAF1-202ENST00000595242 PADI6Q6TGC4 694 aa13.69□□□□□ -0.22
SCAF1-202ENST00000595242 USP37Q86T82 979 aa13.69□□□□□ -0.22
SCAF1-202ENST00000595242 TTC30AQ86WT1 665 aa13.69□□□□□ -0.22
SCAF1-202ENST00000595242 SFR1Q86XK3 245 aa13.69□□□□□ -0.22
SCAF1-202ENST00000595242 REXO1L1PQ8IX06 675 aa13.69□□□□□ -0.22
SCAF1-202ENST00000595242 MAB21L3Q8N8X9 362 aa13.69□□□□□ -0.22
SCAF1-202ENST00000595242 MYRIPQ8NFW9 859 aa13.69□□□□□ -0.22
SCAF1-202ENST00000595242 OLIG1Q8TAK6 271 aa13.69□□□□□ -0.22
SCAF1-202ENST00000595242 RLN3Q8WXF3 142 aa13.69□□□□□ -0.22
SCAF1-202ENST00000595242 FNBP1Q96RU3 617 aa13.69□□□□□ -0.22
SCAF1-202ENST00000595242 DNAJC7Q99615 494 aa13.69□□□□□ -0.22
SCAF1-202ENST00000595242 POLD4Q9HCU8 107 aa13.69□□□□□ -0.22
SCAF1-202ENST00000595242 ABHD10Q9NUJ1 306 aa13.69□□□□□ -0.22
SCAF1-202ENST00000595242 TDP1Q9NUW8 608 aa13.69□□□□□ -0.22
SCAF1-202ENST00000595242 ZMYM5Q9UJ78 669 aa13.69□□□□□ -0.22
SCAF1-202ENST00000595242 PILRBQ9UKJ0 227 aa13.69□□□□□ -0.22
SCAF1-202ENST00000595242 CAPN11Q9UMQ6 739 aa13.69□□□□□ -0.22
SCAF1-202ENST00000595242 PAXBP1Q9Y5B6 917 aa13.69□□□□□ -0.22
SCAF1-202ENST00000595242 ATXN2Q99700 1313 aaKnown RBP13.68□□□□□ -0.22
SCAF1-202ENST00000595242 SCN1AP35498 2009 aa13.68□□□□□ -0.22
SCAF1-202ENST00000595242 PDXKO00764 312 aa13.68□□□□□ -0.22
SCAF1-202ENST00000595242 TBCAO75347 108 aaKnown RBP13.68□□□□□ -0.22
SCAF1-202ENST00000595242 PRKCSHP14314 528 aaPredicted RBP13.68□□□□□ -0.22
SCAF1-202ENST00000595242 DPP6P42658 865 aa13.68□□□□□ -0.22
SCAF1-202ENST00000595242 GFPT1Q06210 699 aaPredicted RBP13.68□□□□□ -0.22
SCAF1-202ENST00000595242 VEPH1Q14D04 833 aa13.68□□□□□ -0.22
SCAF1-202ENST00000595242 VWA3BQ502W6 1294 aa13.68□□□□□ -0.22
SCAF1-202ENST00000595242 TMTC1Q8IUR5 882 aa13.68□□□□□ -0.22
SCAF1-202ENST00000595242 CPA6Q8N4T0 437 aa13.68□□□□□ -0.22
SCAF1-202ENST00000595242 FRMD1Q8N878 549 aa13.68□□□□□ -0.22
SCAF1-202ENST00000595242 PNPLA1Q8N8W4 532 aa13.68□□□□□ -0.22
SCAF1-202ENST00000595242 CCDC26Q8TAB7 109 aa13.68□□□□□ -0.22
SCAF1-202ENST00000595242 RIN3Q8TB24 985 aa13.68□□□□□ -0.22
SCAF1-202ENST00000595242 USP33Q8TEY7 942 aa13.68□□□□□ -0.22
SCAF1-202ENST00000595242 IFT74Q96LB3 600 aa13.68□□□□□ -0.22
SCAF1-202ENST00000595242 SEPT5Q99719 369 aaPredicted RBP13.68□□□□□ -0.22
SCAF1-202ENST00000595242 ACO2Q99798 780 aaKnown RBP13.68□□□□□ -0.22
SCAF1-202ENST00000595242 ECT2Q9H8V3 914 aa13.68□□□□□ -0.22
SCAF1-202ENST00000595242 PTPRHQ9HD43 1115 aa13.68□□□□□ -0.22
SCAF1-202ENST00000595242 HSFX1Q9UBD0 423 aa13.68□□□□□ -0.22
SCAF1-202ENST00000595242 TUBGCP4Q9UGJ1 667 aa13.68□□□□□ -0.22
SCAF1-202ENST00000595242 SLC6A14Q9UN76 642 aa13.68□□□□□ -0.22
SCAF1-202ENST00000595242 PPP2R2CQ9Y2T4 447 aa13.68□□□□□ -0.22
SCAF1-202ENST00000595242 CD59P13987 128 aa13.67□□□□□ -0.22
SCAF1-202ENST00000595242 ATF6P18850 670 aa13.67□□□□□ -0.22
SCAF1-202ENST00000595242 ITPKAP23677 461 aa13.67□□□□□ -0.22
SCAF1-202ENST00000595242 NMT1P30419 496 aaKnown RBP13.67□□□□□ -0.22
SCAF1-202ENST00000595242 P2RY2P41231 377 aa13.67□□□□□ -0.22
SCAF1-202ENST00000595242 SEC13P55735 322 aa13.67□□□□□ -0.22
SCAF1-202ENST00000595242 MYBPC2Q14324 1141 aa13.67□□□□□ -0.22
SCAF1-202ENST00000595242 TAF12Q16514 161 aa13.67□□□□□ -0.22
SCAF1-202ENST00000595242 CRY1Q16526 586 aa13.67□□□□□ -0.22
SCAF1-202ENST00000595242 MEA1Q16626 185 aa13.67□□□□□ -0.22
SCAF1-202ENST00000595242 KNOP1Q1ED39 458 aaKnown RBP13.67□□□□□ -0.22
SCAF1-202ENST00000595242 FKBP15Q5T1M5 1219 aa13.67□□□□□ -0.22
SCAF1-202ENST00000595242 PEAR1Q5VY43 1037 aaPredicted RBP13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms