RNA–Protein interactions for RNA: ENST00000594552.5

CAPN12-204, Transcript of calpain 12, human

TSL 2

Gene CAPN12, Length 1,046 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CAPN12-204	ENST00000594552	CEP63	Q96MT8	703 aa		13.82	□□□□□ -0.2
CAPN12-204	ENST00000594552	IMPG2	Q9BZV3	1241 aa		13.82	□□□□□ -0.2
CAPN12-204	ENST00000594552	ECT2	Q9H8V3	914 aa		13.82	□□□□□ -0.2
CAPN12-204	ENST00000594552	CTNND2	Q9UQB3	1225 aa		13.82	□□□□□ -0.2
CAPN12-204	ENST00000594552	SPTBN4	Q9H254	2564 aa		13.82	□□□□□ -0.2
CAPN12-204	ENST00000594552		K7ESF4	209 aa		13.81	□□□□□ -0.2
CAPN12-204	ENST00000594552	TRDMT1	O14717	391 aa	Known RBP	13.81	□□□□□ -0.2
CAPN12-204	ENST00000594552	EGF	P01133	1207 aa		13.81	□□□□□ -0.2
CAPN12-204	ENST00000594552	FAM163B	P0C2L3	166 aa		13.81	□□□□□ -0.2
CAPN12-204	ENST00000594552	TRIM49	P0CI25	452 aa		13.81	□□□□□ -0.2
CAPN12-204	ENST00000594552	TRIM49C	P0CI26	452 aa		13.81	□□□□□ -0.2
CAPN12-204	ENST00000594552	PTPN1	P18031	435 aa	Known RBP	13.81	□□□□□ -0.2
CAPN12-204	ENST00000594552	GJA4	P35212	333 aa		13.81	□□□□□ -0.2
CAPN12-204	ENST00000594552	PIK3CA	P42336	1068 aa		13.81	□□□□□ -0.2
CAPN12-204	ENST00000594552	DMWD	Q09019	674 aa		13.81	□□□□□ -0.2
CAPN12-204	ENST00000594552	SRSF5	Q13243	272 aa	Known RBP	13.81	□□□□□ -0.2
CAPN12-204	ENST00000594552	C1orf220	Q5T0J3	134 aa		13.81	□□□□□ -0.2
CAPN12-204	ENST00000594552	ISM2	Q6H9L7	571 aa		13.81	□□□□□ -0.2
CAPN12-204	ENST00000594552	KLHL10	Q6JEL2	608 aa		13.81	□□□□□ -0.2
CAPN12-204	ENST00000594552	FSTL4	Q6MZW2	842 aa		13.81	□□□□□ -0.2
CAPN12-204	ENST00000594552	TTI2	Q6NXR4	508 aa		13.81	□□□□□ -0.2
CAPN12-204	ENST00000594552	DDX42	Q86XP3	938 aa	Known RBP eCLIP	13.81	□□□□□ -0.2
CAPN12-204	ENST00000594552	PDZD8	Q8NEN9	1154 aa		13.81	□□□□□ -0.2
CAPN12-204	ENST00000594552	NELFB	Q8WX92	580 aa		13.81	□□□□□ -0.2
CAPN12-204	ENST00000594552	TNIP3	Q96KP6	325 aa		13.81	□□□□□ -0.2
CAPN12-204	ENST00000594552	CYP2S1	Q96SQ9	504 aa		13.81	□□□□□ -0.2
CAPN12-204	ENST00000594552	TMEM8A	Q9HCN3	771 aa		13.81	□□□□□ -0.2
CAPN12-204	ENST00000594552	ARMCX3	Q9UH62	379 aa	Predicted RBP	13.81	□□□□□ -0.2
CAPN12-204	ENST00000594552	ARHGAP26	Q9UNA1	814 aa		13.81	□□□□□ -0.2
CAPN12-204	ENST00000594552	PTPRD	P23468	1912 aa		13.8	□□□□□ -0.2
CAPN12-204	ENST00000594552	SLC9A3R1	O14745	358 aa	Predicted RBP	13.8	□□□□□ -0.2
CAPN12-204	ENST00000594552	FOXD2	O60548	495 aa	Predicted RBP	13.8	□□□□□ -0.2
CAPN12-204	ENST00000594552	LRP3	O75074	770 aa		13.8	□□□□□ -0.2
CAPN12-204	ENST00000594552	RTN3	O95197	1032 aa	Predicted RBP	13.8	□□□□□ -0.2
CAPN12-204	ENST00000594552	MBD3	O95983	291 aa		13.8	□□□□□ -0.2
CAPN12-204	ENST00000594552	ASS1	P00966	412 aa	Known RBP	13.8	□□□□□ -0.2
CAPN12-204	ENST00000594552	CST3	P01034	146 aa	Predicted RBP	13.8	□□□□□ -0.2
CAPN12-204	ENST00000594552	MBL2	P11226	248 aa	Predicted RBP	13.8	□□□□□ -0.2
CAPN12-204	ENST00000594552	MXI1	P50539	228 aa		13.8	□□□□□ -0.2
CAPN12-204	ENST00000594552	NOP14	P78316	857 aa	Known RBP	13.8	□□□□□ -0.2
CAPN12-204	ENST00000594552	SGSM1	Q2NKQ1	1148 aa		13.8	□□□□□ -0.2
CAPN12-204	ENST00000594552	WDR44	Q5JSH3	913 aa		13.8	□□□□□ -0.2
CAPN12-204	ENST00000594552	C12orf50	Q8NA57	414 aa	Predicted RBP	13.8	□□□□□ -0.2
CAPN12-204	ENST00000594552	MLKL	Q8NB16	471 aa		13.8	□□□□□ -0.2
CAPN12-204	ENST00000594552	RPLP0P6	Q8NHW5	317 aa		13.8	□□□□□ -0.2
CAPN12-204	ENST00000594552	RIN3	Q8TB24	985 aa		13.8	□□□□□ -0.2
CAPN12-204	ENST00000594552	FBXO32	Q969P5	355 aa		13.8	□□□□□ -0.2
CAPN12-204	ENST00000594552	CHFR	Q96EP1	664 aa		13.8	□□□□□ -0.2
CAPN12-204	ENST00000594552	EEF2KMT	Q96G04	330 aa		13.8	□□□□□ -0.2
CAPN12-204	ENST00000594552	C8orf48	Q96LL4	319 aa		13.8	□□□□□ -0.2
CAPN12-204	ENST00000594552	SLC22A12	Q96S37	553 aa		13.8	□□□□□ -0.2
CAPN12-204	ENST00000594552	ZNF518B	Q9C0D4	1074 aa		13.8	□□□□□ -0.2
CAPN12-204	ENST00000594552	DNAI2	Q9GZS0	605 aa		13.8	□□□□□ -0.2
CAPN12-204	ENST00000594552	NACA2	Q9H009	215 aa		13.8	□□□□□ -0.2
CAPN12-204	ENST00000594552	DPEP3	Q9H4B8	488 aa		13.8	□□□□□ -0.2
CAPN12-204	ENST00000594552	SMYD3	Q9H7B4	428 aa		13.8	□□□□□ -0.2
CAPN12-204	ENST00000594552	METTL14	Q9HCE5	456 aa	Known RBP	13.8	□□□□□ -0.2
CAPN12-204	ENST00000594552	SMPD4	Q9NXE4	827 aa		13.8	□□□□□ -0.2
CAPN12-204	ENST00000594552	ANAPC1	Q9H1A4	1944 aa		13.8	□□□□□ -0.2
CAPN12-204	ENST00000594552	GPR179	Q6PRD1	2367 aa		13.79	□□□□□ -0.2
CAPN12-204	ENST00000594552	LEFTY2	O00292	366 aa		13.79	□□□□□ -0.2
CAPN12-204	ENST00000594552	CLDN5	O00501	218 aa		13.79	□□□□□ -0.2
CAPN12-204	ENST00000594552	HR	O43593	1189 aa		13.79	□□□□□ -0.2
CAPN12-204	ENST00000594552	RPP40	O75818	363 aa	Known RBP	13.79	□□□□□ -0.2
CAPN12-204	ENST00000594552	VNN1	O95497	513 aa		13.79	□□□□□ -0.2
CAPN12-204	ENST00000594552	GNA14	O95837	355 aa		13.79	□□□□□ -0.2
CAPN12-204	ENST00000594552	HLA-DRA	P01903	254 aa		13.79	□□□□□ -0.2
CAPN12-204	ENST00000594552	HOXA6	P31267	233 aa		13.79	□□□□□ -0.2
CAPN12-204	ENST00000594552	RAP1GAP	P47736	663 aa		13.79	□□□□□ -0.2
CAPN12-204	ENST00000594552	GCLM	P48507	274 aa		13.79	□□□□□ -0.2
CAPN12-204	ENST00000594552	PXN	P49023	591 aa	Predicted RBP	13.79	□□□□□ -0.2
CAPN12-204	ENST00000594552	PPP3CA	Q08209	521 aa		13.79	□□□□□ -0.2
CAPN12-204	ENST00000594552	TAF10	Q12962	218 aa		13.79	□□□□□ -0.2
CAPN12-204	ENST00000594552	DCAF17	Q5H9S7	520 aa	Predicted RBP	13.79	□□□□□ -0.2
CAPN12-204	ENST00000594552	KRT39	Q6A163	491 aa		13.79	□□□□□ -0.2
CAPN12-204	ENST00000594552	FAM35A	Q86V20	835 aa		13.79	□□□□□ -0.2
CAPN12-204	ENST00000594552	CCDC150	Q8NCX0	1101 aa		13.79	□□□□□ -0.2
CAPN12-204	ENST00000594552	SMARCD1	Q96GM5	515 aa		13.79	□□□□□ -0.2
CAPN12-204	ENST00000594552	HHIP	Q96QV1	700 aa		13.79	□□□□□ -0.2
CAPN12-204	ENST00000594552	RTKN	Q9BST9	563 aa		13.79	□□□□□ -0.2
CAPN12-204	ENST00000594552	TTLL2	Q9BWV7	592 aa		13.79	□□□□□ -0.2
CAPN12-204	ENST00000594552	DMAP1	Q9NPF5	467 aa	Predicted RBP	13.79	□□□□□ -0.2
CAPN12-204	ENST00000594552	KRT82	Q9NSB4	513 aa		13.79	□□□□□ -0.2
CAPN12-204	ENST00000594552	DLL3	Q9NYJ7	618 aa		13.79	□□□□□ -0.2
CAPN12-204	ENST00000594552	GCNT4	Q9P109	453 aa		13.79	□□□□□ -0.2
CAPN12-204	ENST00000594552	DACH1	Q9UI36	760 aa		13.79	□□□□□ -0.2
CAPN12-204	ENST00000594552	CPQ	Q9Y646	472 aa		13.79	□□□□□ -0.2
CAPN12-204	ENST00000594552	GREB1	Q4ZG55	1949 aa		13.79	□□□□□ -0.2
CAPN12-204	ENST00000594552	DMXL1	Q9Y485	3027 aa		13.78	□□□□□ -0.2
CAPN12-204	ENST00000594552	ZNF840P	A6NDX5	716 aa		13.78	□□□□□ -0.2
CAPN12-204	ENST00000594552	OTOL1	A6NHN0	477 aa	Predicted RBP	13.78	□□□□□ -0.2
CAPN12-204	ENST00000594552	FGFR1OP	O95684	399 aa	Known RBP	13.78	□□□□□ -0.2
CAPN12-204	ENST00000594552	TCF3	P15923	654 aa		13.78	□□□□□ -0.2
CAPN12-204	ENST00000594552	YWHAQ	P27348	245 aa		13.78	□□□□□ -0.2
CAPN12-204	ENST00000594552	GALK1	P51570	392 aa		13.78	□□□□□ -0.2
CAPN12-204	ENST00000594552	USP46	P62068	366 aa		13.78	□□□□□ -0.2
CAPN12-204	ENST00000594552	ELF2	Q15723	593 aa		13.78	□□□□□ -0.2
CAPN12-204	ENST00000594552	EML3	Q32P44	896 aa		13.78	□□□□□ -0.2
CAPN12-204	ENST00000594552	AASDH	Q4L235	1098 aa	Predicted RBP	13.78	□□□□□ -0.2
CAPN12-204	ENST00000594552	PKN3	Q6P5Z2	889 aa		13.78	□□□□□ -0.2

Retrieved 100 of 20,778 RNA–protein pairs in 30 ms