RNA–Protein interactions for RNA: ENST00000594213.5

GTF2F1-203, Transcript of general transcription factor IIF subunit 1, humanhuman

TSL 3

Gene GTF2F1, Length 1,002 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-203ENST00000594213 YWHAQP27348 245 aa16.9■□□□□ 0.3
GTF2F1-203ENST00000594213 GBP1P32455 592 aa16.9■□□□□ 0.3
GTF2F1-203ENST00000594213 CDH8P55286 799 aa16.9■□□□□ 0.3
GTF2F1-203ENST00000594213 HSF5Q4G112 596 aaPredicted RBP16.9■□□□□ 0.3
GTF2F1-203ENST00000594213 DDX42Q86XP3 938 aaKnown RBP eCLIP16.9■□□□□ 0.3
GTF2F1-203ENST00000594213 ALLCQ8N6M5 410 aa16.9■□□□□ 0.3
GTF2F1-203ENST00000594213 SYAP1Q96A49 352 aaPredicted RBP16.9■□□□□ 0.3
GTF2F1-203ENST00000594213 KCNK16Q96T55 309 aa16.9■□□□□ 0.3
GTF2F1-203ENST00000594213 SMYD3Q9H7B4 428 aa16.9■□□□□ 0.3
GTF2F1-203ENST00000594213 DMAC2Q9NW81 257 aa16.9■□□□□ 0.3
GTF2F1-203ENST00000594213 TBC1D14Q9P2M4 693 aa16.9■□□□□ 0.3
GTF2F1-203ENST00000594213 NXF1Q9UBU9 619 aaKnown RBP16.9■□□□□ 0.3
GTF2F1-203ENST00000594213 CHORDC1Q9UHD1 332 aaPredicted RBP16.9■□□□□ 0.3
GTF2F1-203ENST00000594213 CDX4O14627 284 aaPredicted RBP16.89■□□□□ 0.29
GTF2F1-203ENST00000594213 POLR2DO15514 142 aaKnown RBP16.89■□□□□ 0.29
GTF2F1-203ENST00000594213 ADAM23O75077 832 aa16.89■□□□□ 0.29
GTF2F1-203ENST00000594213 RTN3O95197 1032 aaPredicted RBP16.89■□□□□ 0.29
GTF2F1-203ENST00000594213 ABL1P00519 1130 aa16.89■□□□□ 0.29
GTF2F1-203ENST00000594213 C4BPAP04003 597 aaKnown RBP16.89■□□□□ 0.29
GTF2F1-203ENST00000594213 MBL2P11226 248 aaPredicted RBP16.89■□□□□ 0.29
GTF2F1-203ENST00000594213 P2RY2P41231 377 aa16.89■□□□□ 0.29
GTF2F1-203ENST00000594213 GRIA2P42262 883 aa16.89■□□□□ 0.29
GTF2F1-203ENST00000594213 TNFRSF4P43489 277 aa16.89■□□□□ 0.29
GTF2F1-203ENST00000594213 CASP4P49662 377 aa16.89■□□□□ 0.29
GTF2F1-203ENST00000594213 TRPC3Q13507 836 aa16.89■□□□□ 0.29
GTF2F1-203ENST00000594213 KNOP1Q1ED39 458 aaKnown RBP16.89■□□□□ 0.29
GTF2F1-203ENST00000594213 LY6G5CQ5SRR4 150 aa16.89■□□□□ 0.29
GTF2F1-203ENST00000594213 ETFBKMTQ8IXQ9 262 aa16.89■□□□□ 0.29
GTF2F1-203ENST00000594213 TXNDC5Q8NBS9 432 aaKnown RBP16.89■□□□□ 0.29
GTF2F1-203ENST00000594213 PDZD8Q8NEN9 1154 aa16.89■□□□□ 0.29
GTF2F1-203ENST00000594213 SCAMP5Q8TAC9 235 aa16.89■□□□□ 0.29
GTF2F1-203ENST00000594213 PARD3BQ8TEW8 1205 aa16.89■□□□□ 0.29
GTF2F1-203ENST00000594213 TMEM174Q8WUU8 243 aa16.89■□□□□ 0.29
GTF2F1-203ENST00000594213 FBXO32Q969P5 355 aa16.89■□□□□ 0.29
GTF2F1-203ENST00000594213 OTUB2Q96DC9 234 aa16.89■□□□□ 0.29
GTF2F1-203ENST00000594213 CHAMP1Q96JM3 812 aa16.89■□□□□ 0.29
GTF2F1-203ENST00000594213 SDCBP2Q9H190 292 aa16.89■□□□□ 0.29
GTF2F1-203ENST00000594213 BLZF1Q9H2G9 400 aa16.89■□□□□ 0.29
GTF2F1-203ENST00000594213 SLC39A2Q9NP94 309 aa16.89■□□□□ 0.29
GTF2F1-203ENST00000594213 WASF3Q9UPY6 502 aa16.89■□□□□ 0.29
GTF2F1-203ENST00000594213 PTPRDP23468 1912 aa16.88■□□□□ 0.29
GTF2F1-203ENST00000594213 GON4LQ3T8J9 2241 aa16.88■□□□□ 0.29
GTF2F1-203ENST00000594213 PATE3B3GLJ2 98 aa16.88■□□□□ 0.29
GTF2F1-203ENST00000594213 GIPC1O14908 333 aa16.88■□□□□ 0.29
GTF2F1-203ENST00000594213 VNN1O95497 513 aa16.88■□□□□ 0.29
GTF2F1-203ENST00000594213 KLF8O95600 359 aaPredicted RBP16.88■□□□□ 0.29
GTF2F1-203ENST00000594213 ADH1CP00326 375 aa16.88■□□□□ 0.29
GTF2F1-203ENST00000594213 APODP05090 189 aa16.88■□□□□ 0.29
GTF2F1-203ENST00000594213 ADH5P11766 374 aa16.88■□□□□ 0.29
GTF2F1-203ENST00000594213 TIE1P35590 1138 aa16.88■□□□□ 0.29
GTF2F1-203ENST00000594213 TUBP50607 506 aa16.88■□□□□ 0.29
GTF2F1-203ENST00000594213 CUL4BQ13620 913 aa16.88■□□□□ 0.29
GTF2F1-203ENST00000594213 HECTD3Q5T447 861 aa16.88■□□□□ 0.29
GTF2F1-203ENST00000594213 PSAPL1Q6NUJ1 521 aa16.88■□□□□ 0.29
GTF2F1-203ENST00000594213 FAM35AQ86V20 835 aa16.88■□□□□ 0.29
GTF2F1-203ENST00000594213 ZMIZ2Q8NF64 920 aa16.88■□□□□ 0.29
GTF2F1-203ENST00000594213 WBP2Q969T9 261 aa16.88■□□□□ 0.29
GTF2F1-203ENST00000594213 ARHGEF4Q9NR80 690 aa16.88■□□□□ 0.29
GTF2F1-203ENST00000594213 COMMD8Q9NX08 183 aa16.88■□□□□ 0.29
GTF2F1-203ENST00000594213 HCN2Q9UL51 889 aa16.88■□□□□ 0.29
GTF2F1-203ENST00000594213 LRRIQ3A6PVS8 624 aaPredicted RBP16.87■□□□□ 0.29
GTF2F1-203ENST00000594213 KHNYNO15037 678 aaKnown RBP16.87■□□□□ 0.29
GTF2F1-203ENST00000594213 HOXC11O43248 304 aaPredicted RBP16.87■□□□□ 0.29
GTF2F1-203ENST00000594213 KLRC4O43908 158 aa16.87■□□□□ 0.29
GTF2F1-203ENST00000594213 GREM1O60565 184 aa16.87■□□□□ 0.29
GTF2F1-203ENST00000594213 EXOC3O60645 756 aa16.87■□□□□ 0.29
GTF2F1-203ENST00000594213 ALDH1A2O94788 518 aa16.87■□□□□ 0.29
GTF2F1-203ENST00000594213 PGFP49763 221 aa16.87■□□□□ 0.29
GTF2F1-203ENST00000594213 AP3M2P53677 418 aa16.87■□□□□ 0.29
GTF2F1-203ENST00000594213 SLC5A3P53794 718 aa16.87■□□□□ 0.29
GTF2F1-203ENST00000594213 IRX4P78413 519 aa16.87■□□□□ 0.29
GTF2F1-203ENST00000594213 IFRD2Q12894 506 aaPredicted RBP16.87■□□□□ 0.29
GTF2F1-203ENST00000594213 MAP7D1Q3KQU3 841 aa16.87■□□□□ 0.29
GTF2F1-203ENST00000594213 CYP2U1Q7Z449 544 aa16.87■□□□□ 0.29
GTF2F1-203ENST00000594213 FUKQ8N0W3 1084 aa16.87■□□□□ 0.29
GTF2F1-203ENST00000594213 RLN3Q8WXF3 142 aa16.87■□□□□ 0.29
GTF2F1-203ENST00000594213 ELMO3Q96BJ8 720 aa16.87■□□□□ 0.29
GTF2F1-203ENST00000594213 CCSER2Q9H7U1 834 aa16.87■□□□□ 0.29
GTF2F1-203ENST00000594213 EVLQ9UI08 416 aaPredicted RBP16.87■□□□□ 0.29
GTF2F1-203ENST00000594213 MBD1Q9UIS9 605 aaPredicted RBP16.87■□□□□ 0.29
GTF2F1-203ENST00000594213 PCDHA7Q9UN72 937 aa16.87■□□□□ 0.29
GTF2F1-203ENST00000594213 PALM2-AKAP2B1ALY0 433 aaPredicted RBP16.86■□□□□ 0.29
GTF2F1-203ENST00000594213 ZZEF1O43149 2961 aa16.86■□□□□ 0.29
GTF2F1-203ENST00000594213 PHACTR2O75167 634 aa16.86■□□□□ 0.29
GTF2F1-203ENST00000594213 NOVA1P51513 510 aaKnown RBP16.86■□□□□ 0.29
GTF2F1-203ENST00000594213 GAD2Q05329 585 aa16.86■□□□□ 0.29
GTF2F1-203ENST00000594213 NCOA4Q13772 614 aa16.86■□□□□ 0.29
GTF2F1-203ENST00000594213 ZNF699Q32M78 642 aa16.86■□□□□ 0.29
GTF2F1-203ENST00000594213 ZNF667Q5HYK9 610 aa16.86■□□□□ 0.29
GTF2F1-203ENST00000594213 EOGTQ5NDL2 527 aa16.86■□□□□ 0.29
GTF2F1-203ENST00000594213 DAB2IPQ5VWQ8 1189 aa16.86■□□□□ 0.29
GTF2F1-203ENST00000594213 RESP18Q5W5W9 173 aa16.86■□□□□ 0.29
GTF2F1-203ENST00000594213 SLC9A9Q8IVB4 645 aa16.86■□□□□ 0.29
GTF2F1-203ENST00000594213 BBS7Q8IWZ6 715 aa16.86■□□□□ 0.29
GTF2F1-203ENST00000594213 CRYBG2Q8N1P7 616 aa16.86■□□□□ 0.29
GTF2F1-203ENST00000594213 FRMD1Q8N878 549 aa16.86■□□□□ 0.29
GTF2F1-203ENST00000594213 KCNV2Q8TDN2 545 aa16.86■□□□□ 0.29
GTF2F1-203ENST00000594213 TNIP3Q96KP6 325 aa16.86■□□□□ 0.29
GTF2F1-203ENST00000594213 SMOQ99835 787 aa16.86■□□□□ 0.29
GTF2F1-203ENST00000594213 BACH2Q9BYV9 841 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 88.8 ms