RNA–Protein interactions for RNA: ENST00000593641.3

SSBP4-203, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 900 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-203ENST00000593641 ADH5P11766 374 aa24.06■■□□□ 1.44
SSBP4-203ENST00000593641 PI4KAP42356 2102 aa24.06■■□□□ 1.44
SSBP4-203ENST00000593641 AP3M2P53677 418 aa24.06■■□□□ 1.44
SSBP4-203ENST00000593641 ZNF667Q5HYK9 610 aa24.06■■□□□ 1.44
SSBP4-203ENST00000593641 MDGA1Q8NFP4 955 aa24.06■■□□□ 1.44
SSBP4-203ENST00000593641 TNIP3Q96KP6 325 aa24.06■■□□□ 1.44
SSBP4-203ENST00000593641 GZF1Q9H116 711 aaPredicted RBP24.06■■□□□ 1.44
SSBP4-203ENST00000593641 SMYD3Q9H7B4 428 aa24.06■■□□□ 1.44
SSBP4-203ENST00000593641 PALM2-AKAP2B1ALY0 433 aaPredicted RBP24.05■■□□□ 1.44
SSBP4-203ENST00000593641 KAT7O95251 611 aa24.05■■□□□ 1.44
SSBP4-203ENST00000593641 AFMP43652 599 aa24.05■■□□□ 1.44
SSBP4-203ENST00000593641 ME1P48163 572 aa24.05■■□□□ 1.44
SSBP4-203ENST00000593641 CASP4P49662 377 aa24.05■■□□□ 1.44
SSBP4-203ENST00000593641 FOXD4L6Q3SYB3 417 aaPredicted RBP24.05■■□□□ 1.44
SSBP4-203ENST00000593641 HSF5Q4G112 596 aaPredicted RBP24.05■■□□□ 1.44
SSBP4-203ENST00000593641 HECTD3Q5T447 861 aa24.05■■□□□ 1.44
SSBP4-203ENST00000593641 FOXD4L3Q6VB84 417 aaPredicted RBP24.05■■□□□ 1.44
SSBP4-203ENST00000593641 FAM35AQ86V20 835 aa24.05■■□□□ 1.44
SSBP4-203ENST00000593641 VRTNQ9H8Y1 702 aa24.05■■□□□ 1.44
SSBP4-203ENST00000593641 DMAP1Q9NPF5 467 aaPredicted RBP24.05■■□□□ 1.44
SSBP4-203ENST00000593641 ARHGEF4Q9NR80 690 aa24.05■■□□□ 1.44
SSBP4-203ENST00000593641 USP24Q9UPU5 2620 aa24.04■■□□□ 1.44
SSBP4-203ENST00000593641 E2F8A0AVK6 867 aa24.04■■□□□ 1.44
SSBP4-203ENST00000593641 PDIA4P13667 645 aaKnown RBP24.04■■□□□ 1.44
SSBP4-203ENST00000593641 PMLP29590 882 aa24.04■■□□□ 1.44
SSBP4-203ENST00000593641 TIE1P35590 1138 aa24.04■■□□□ 1.44
SSBP4-203ENST00000593641 SLC6A11P48066 632 aa24.04■■□□□ 1.44
SSBP4-203ENST00000593641 CUL4BQ13620 913 aa24.04■■□□□ 1.44
SSBP4-203ENST00000593641 NCOA4Q13772 614 aa24.04■■□□□ 1.44
SSBP4-203ENST00000593641 RHBDF2Q6PJF5 856 aa24.04■■□□□ 1.44
SSBP4-203ENST00000593641 SCARA5Q6ZMJ2 495 aa24.04■■□□□ 1.44
SSBP4-203ENST00000593641 CYP2U1Q7Z449 544 aa24.04■■□□□ 1.44
SSBP4-203ENST00000593641 CEP57L1Q8IYX8 460 aa24.04■■□□□ 1.44
SSBP4-203ENST00000593641 ALLCQ8N6M5 410 aa24.04■■□□□ 1.44
SSBP4-203ENST00000593641 TXNDC5Q8NBS9 432 aaKnown RBP24.04■■□□□ 1.44
SSBP4-203ENST00000593641 OTUB2Q96DC9 234 aa24.04■■□□□ 1.44
SSBP4-203ENST00000593641 SMARCD1Q96GM5 515 aa24.04■■□□□ 1.44
SSBP4-203ENST00000593641 KCNK16Q96T55 309 aa24.04■■□□□ 1.44
SSBP4-203ENST00000593641 POLMQ9NP87 494 aaPredicted RBP24.04■■□□□ 1.44
SSBP4-203ENST00000593641 SH3BP1Q9Y3L3 701 aa24.04■■□□□ 1.44
SSBP4-203ENST00000593641 ANTXRLA6NF34 631 aa24.03■■□□□ 1.44
SSBP4-203ENST00000593641 KHNYNO15037 678 aaKnown RBP24.03■■□□□ 1.44
SSBP4-203ENST00000593641 COCHO43405 550 aa24.03■■□□□ 1.44
SSBP4-203ENST00000593641 KCNK5O95279 499 aa24.03■■□□□ 1.44
SSBP4-203ENST00000593641 KLF8O95600 359 aaPredicted RBP24.03■■□□□ 1.44
SSBP4-203ENST00000593641 P4HA1P13674 534 aa24.03■■□□□ 1.44
SSBP4-203ENST00000593641 GRIA2P42262 883 aa24.03■■□□□ 1.44
SSBP4-203ENST00000593641 SLC5A3P53794 718 aa24.03■■□□□ 1.44
SSBP4-203ENST00000593641 CDH8P55286 799 aa24.03■■□□□ 1.44
SSBP4-203ENST00000593641 KDSRQ06136 332 aa24.03■■□□□ 1.44
SSBP4-203ENST00000593641 EOGTQ5NDL2 527 aa24.03■■□□□ 1.44
SSBP4-203ENST00000593641 DAB2IPQ5VWQ8 1189 aa24.03■■□□□ 1.44
SSBP4-203ENST00000593641 C12orf40Q86WS4 652 aa24.03■■□□□ 1.44
SSBP4-203ENST00000593641 WHAMMQ8TF30 809 aa24.03■■□□□ 1.44
SSBP4-203ENST00000593641 SPACA7Q96KW9 195 aa24.03■■□□□ 1.44
SSBP4-203ENST00000593641 BACH2Q9BYV9 841 aa24.03■■□□□ 1.44
SSBP4-203ENST00000593641 NACA2Q9H009 215 aa24.03■■□□□ 1.44
SSBP4-203ENST00000593641 CIZ1Q9ULV3 898 aaPredicted RBP24.03■■□□□ 1.44
SSBP4-203ENST00000593641 PCDHA7Q9UN72 937 aa24.03■■□□□ 1.44
SSBP4-203ENST00000593641 CEP295Q9C0D2 2601 aa24.03■■□□□ 1.44
SSBP4-203ENST00000593641 PLXND1Q9Y4D7 1925 aa24.02■■□□□ 1.44
SSBP4-203ENST00000593641 LNP1A1A4G5 178 aa24.02■■□□□ 1.44
SSBP4-203ENST00000593641 LRRIQ3A6PVS8 624 aaPredicted RBP24.02■■□□□ 1.44
SSBP4-203ENST00000593641 C4orf47A7E2U8 309 aa24.02■■□□□ 1.44
SSBP4-203ENST00000593641 BCKDHBP21953 392 aa24.02■■□□□ 1.44
SSBP4-203ENST00000593641 DHPSP49366 369 aaPredicted RBP24.02■■□□□ 1.44
SSBP4-203ENST00000593641 TUBP50607 506 aa24.02■■□□□ 1.44
SSBP4-203ENST00000593641 GAD2Q05329 585 aa24.02■■□□□ 1.44
SSBP4-203ENST00000593641 PREPLQ4J6C6 727 aaPredicted RBP24.02■■□□□ 1.44
SSBP4-203ENST00000593641 LY6G5CQ5SRR4 150 aa24.02■■□□□ 1.44
SSBP4-203ENST00000593641 BTBD8Q5XKL5 378 aa24.02■■□□□ 1.44
SSBP4-203ENST00000593641 PSAPL1Q6NUJ1 521 aa24.02■■□□□ 1.44
SSBP4-203ENST00000593641 TMEM92Q6UXU6 159 aa24.02■■□□□ 1.44
SSBP4-203ENST00000593641 IL17RCQ8NAC3 791 aa24.02■■□□□ 1.44
SSBP4-203ENST00000593641 SCAMP5Q8TAC9 235 aa24.02■■□□□ 1.44
SSBP4-203ENST00000593641 PLEKHO2Q8TD55 490 aa24.02■■□□□ 1.44
SSBP4-203ENST00000593641 PARD3BQ8TEW8 1205 aa24.02■■□□□ 1.44
SSBP4-203ENST00000593641 KRT82Q9NSB4 513 aa24.02■■□□□ 1.44
SSBP4-203ENST00000593641 BCCIPQ9P287 314 aaKnown RBP eCLIP24.02■■□□□ 1.44
SSBP4-203ENST00000593641 CHORDC1Q9UHD1 332 aaPredicted RBP24.02■■□□□ 1.44
SSBP4-203ENST00000593641 ASCC3Q8N3C0 2202 aaKnown RBP24.01■■□□□ 1.43
SSBP4-203ENST00000593641 SGK1O00141 431 aa24.01■■□□□ 1.43
SSBP4-203ENST00000593641 AP1G2O75843 785 aa24.01■■□□□ 1.43
SSBP4-203ENST00000593641 F13A1P00488 732 aa24.01■■□□□ 1.43
SSBP4-203ENST00000593641 HSP90AA1P07900 732 aaKnown RBP24.01■■□□□ 1.43
SSBP4-203ENST00000593641 ZSCAN22P10073 491 aaPredicted RBP24.01■■□□□ 1.43
SSBP4-203ENST00000593641 SNX30Q5VWJ9 437 aa24.01■■□□□ 1.43
SSBP4-203ENST00000593641 RESP18Q5W5W9 173 aa24.01■■□□□ 1.43
SSBP4-203ENST00000593641 SFTPA1Q8IWL2 248 aa24.01■■□□□ 1.43
SSBP4-203ENST00000593641 ZFRQ96KR1 1074 aaKnown RBP24.01■■□□□ 1.43
SSBP4-203ENST00000593641 EXOC1Q9NV70 894 aa24.01■■□□□ 1.43
SSBP4-203ENST00000593641 COMMD8Q9NX08 183 aa24.01■■□□□ 1.43
SSBP4-203ENST00000593641 A0A0A0MRY4 1105 aa24■■□□□ 1.43
SSBP4-203ENST00000593641 TNFRSF10BO14763 440 aa24■■□□□ 1.43
SSBP4-203ENST00000593641 HNRNPLP14866 589 aaKnown RBP eCLIP24■■□□□ 1.43
SSBP4-203ENST00000593641 TNFRSF4P43489 277 aa24■■□□□ 1.43
SSBP4-203ENST00000593641 KIR2DL1P43626 348 aaPredicted RBP24■■□□□ 1.43
SSBP4-203ENST00000593641 NOVA1P51513 510 aaKnown RBP24■■□□□ 1.43
SSBP4-203ENST00000593641 CLDN10P78369 228 aa24■■□□□ 1.43
SSBP4-203ENST00000593641 SHC2P98077 582 aa24■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms