RNA–Protein interactions for RNA: ENST00000593597.1

USE1-203, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 2

Gene USE1, Length 587 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-203ENST00000593597 A8MXQ7 604 aa11.34□□□□□ -0.59
USE1-203ENST00000593597 TRIM24O15164 1050 aa11.34□□□□□ -0.59
USE1-203ENST00000593597 POLR2DO15514 142 aaKnown RBP11.34□□□□□ -0.59
USE1-203ENST00000593597 FOXD2O60548 495 aaPredicted RBP11.34□□□□□ -0.59
USE1-203ENST00000593597 GREM1O60565 184 aa11.34□□□□□ -0.59
USE1-203ENST00000593597 BEST1O76090 585 aa11.34□□□□□ -0.59
USE1-203ENST00000593597 KCNK5O95279 499 aa11.34□□□□□ -0.59
USE1-203ENST00000593597 ZDHHC11BP0C7U3 371 aa11.34□□□□□ -0.59
USE1-203ENST00000593597 ANXA13P27216 316 aa11.34□□□□□ -0.59
USE1-203ENST00000593597 TNNC1P63316 161 aa11.34□□□□□ -0.59
USE1-203ENST00000593597 DLG4P78352 724 aa11.34□□□□□ -0.59
USE1-203ENST00000593597 KDSRQ06136 332 aa11.34□□□□□ -0.59
USE1-203ENST00000593597 ORC1Q13415 861 aa11.34□□□□□ -0.59
USE1-203ENST00000593597 CRY1Q16526 586 aa11.34□□□□□ -0.59
USE1-203ENST00000593597 ST3GAL2Q16842 350 aa11.34□□□□□ -0.59
USE1-203ENST00000593597 FOXD4L6Q3SYB3 417 aaPredicted RBP11.34□□□□□ -0.59
USE1-203ENST00000593597 C1orf220Q5T0J3 134 aa11.34□□□□□ -0.59
USE1-203ENST00000593597 IL31Q6EBC2 164 aa11.34□□□□□ -0.59
USE1-203ENST00000593597 FOXD4L3Q6VB84 417 aaPredicted RBP11.34□□□□□ -0.59
USE1-203ENST00000593597 SCARA5Q6ZMJ2 495 aa11.34□□□□□ -0.59
USE1-203ENST00000593597 STXBP4Q6ZWJ1 553 aa11.34□□□□□ -0.59
USE1-203ENST00000593597 ETFBKMTQ8IXQ9 262 aa11.34□□□□□ -0.59
USE1-203ENST00000593597 FUKQ8N0W3 1084 aa11.34□□□□□ -0.59
USE1-203ENST00000593597 TSTD1Q8NFU3 115 aa11.34□□□□□ -0.59
USE1-203ENST00000593597 RLN3Q8WXF3 142 aa11.34□□□□□ -0.59
USE1-203ENST00000593597 FNBP1Q96RU3 617 aa11.34□□□□□ -0.59
USE1-203ENST00000593597 EDEM2Q9BV94 578 aa11.34□□□□□ -0.59
USE1-203ENST00000593597 ELOVL4Q9GZR5 314 aa11.34□□□□□ -0.59
USE1-203ENST00000593597 VRTNQ9H8Y1 702 aa11.34□□□□□ -0.59
USE1-203ENST00000593597 DMAC2Q9NW81 257 aa11.34□□□□□ -0.59
USE1-203ENST00000593597 IL37Q9NZH6 218 aa11.34□□□□□ -0.59
USE1-203ENST00000593597 NXF1Q9UBU9 619 aaKnown RBP11.34□□□□□ -0.59
USE1-203ENST00000593597 MBD1Q9UIS9 605 aaPredicted RBP11.34□□□□□ -0.59
USE1-203ENST00000593597 PCDHA7Q9UN72 937 aa11.34□□□□□ -0.59
USE1-203ENST00000593597 WASF3Q9UPY6 502 aa11.34□□□□□ -0.59
USE1-203ENST00000593597 A0A0A0MRY4 1105 aa11.33□□□□□ -0.6
USE1-203ENST00000593597 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.33□□□□□ -0.6
USE1-203ENST00000593597 FAM92AA1XBS5 289 aa11.33□□□□□ -0.6
USE1-203ENST00000593597 CDX4O14627 284 aaPredicted RBP11.33□□□□□ -0.6
USE1-203ENST00000593597 KAT7O95251 611 aa11.33□□□□□ -0.6
USE1-203ENST00000593597 KLF8O95600 359 aaPredicted RBP11.33□□□□□ -0.6
USE1-203ENST00000593597 CAVIN2O95810 425 aa11.33□□□□□ -0.6
USE1-203ENST00000593597 TOP3BO95985 862 aaKnown RBP11.33□□□□□ -0.6
USE1-203ENST00000593597 C4BPAP04003 597 aaKnown RBP11.33□□□□□ -0.6
USE1-203ENST00000593597 FAM163BP0C2L3 166 aa11.33□□□□□ -0.6
USE1-203ENST00000593597 ADH5P11766 374 aa11.33□□□□□ -0.6
USE1-203ENST00000593597 TIE1P35590 1138 aa11.33□□□□□ -0.6
USE1-203ENST00000593597 P2RY2P41231 377 aa11.33□□□□□ -0.6
USE1-203ENST00000593597 AFMP43652 599 aa11.33□□□□□ -0.6
USE1-203ENST00000593597 SLC5A3P53794 718 aa11.33□□□□□ -0.6
USE1-203ENST00000593597 CLDN10P78369 228 aa11.33□□□□□ -0.6
USE1-203ENST00000593597 SHC2P98077 582 aa11.33□□□□□ -0.6
USE1-203ENST00000593597 STK4Q13043 487 aa11.33□□□□□ -0.6
USE1-203ENST00000593597 LY6G5CQ5SRR4 150 aa11.33□□□□□ -0.6
USE1-203ENST00000593597 RESP18Q5W5W9 173 aa11.33□□□□□ -0.6
USE1-203ENST00000593597 RNF43Q68DV7 783 aa11.33□□□□□ -0.6
USE1-203ENST00000593597 GPRIN1Q7Z2K8 1008 aa11.33□□□□□ -0.6
USE1-203ENST00000593597 MIB1Q86YT6 1006 aa11.33□□□□□ -0.6
USE1-203ENST00000593597 KIAA1958Q8N8K9 716 aa11.33□□□□□ -0.6
USE1-203ENST00000593597 IQUBQ8NA54 791 aa11.33□□□□□ -0.6
USE1-203ENST00000593597 TXNDC5Q8NBS9 432 aaKnown RBP11.33□□□□□ -0.6
USE1-203ENST00000593597 PARD3BQ8TEW8 1205 aa11.33□□□□□ -0.6
USE1-203ENST00000593597 FBXO32Q969P5 355 aa11.33□□□□□ -0.6
USE1-203ENST00000593597 CHAMP1Q96JM3 812 aa11.33□□□□□ -0.6
USE1-203ENST00000593597 SMOQ99835 787 aa11.33□□□□□ -0.6
USE1-203ENST00000593597 KCTD10Q9H3F6 313 aa11.33□□□□□ -0.6
USE1-203ENST00000593597 CD248Q9HCU0 757 aa11.33□□□□□ -0.6
USE1-203ENST00000593597 GMIPQ9P107 970 aa11.33□□□□□ -0.6
USE1-203ENST00000593597 ZFYVE26Q68DK2 2539 aa11.33□□□□□ -0.6
USE1-203ENST00000593597 DMXL2Q8TDJ6 3036 aa11.33□□□□□ -0.6
USE1-203ENST00000593597 ITPR1Q14643 2758 aa11.32□□□□□ -0.6
USE1-203ENST00000593597 C4orf47A7E2U8 309 aa11.32□□□□□ -0.6
USE1-203ENST00000593597 ACTN4O43707 911 aaKnown RBP11.32□□□□□ -0.6
USE1-203ENST00000593597 RHOBTB1O94844 696 aa11.32□□□□□ -0.6
USE1-203ENST00000593597 ABL1P00519 1130 aa11.32□□□□□ -0.6
USE1-203ENST00000593597 MBL2P11226 248 aaPredicted RBP11.32□□□□□ -0.6
USE1-203ENST00000593597 CCDC130P13994 396 aa11.32□□□□□ -0.6
USE1-203ENST00000593597 YWHAQP27348 245 aa11.32□□□□□ -0.6
USE1-203ENST00000593597 ATICP31939 592 aa11.32□□□□□ -0.6
USE1-203ENST00000593597 GBP1P32455 592 aa11.32□□□□□ -0.6
USE1-203ENST00000593597 PPP3CCP48454 512 aa11.32□□□□□ -0.6
USE1-203ENST00000593597 PDE6CP51160 858 aa11.32□□□□□ -0.6
USE1-203ENST00000593597 MRPS21P82921 87 aaKnown RBP11.32□□□□□ -0.6
USE1-203ENST00000593597 NR1H3Q13133 447 aa11.32□□□□□ -0.6
USE1-203ENST00000593597 ELF2Q15723 593 aa11.32□□□□□ -0.6
USE1-203ENST00000593597 KNOP1Q1ED39 458 aaKnown RBP11.32□□□□□ -0.6
USE1-203ENST00000593597 MAP7D1Q3KQU3 841 aa11.32□□□□□ -0.6
USE1-203ENST00000593597 SNX30Q5VWJ9 437 aa11.32□□□□□ -0.6
USE1-203ENST00000593597 SPOPLQ6IQ16 392 aa11.32□□□□□ -0.6
USE1-203ENST00000593597 PSAPL1Q6NUJ1 521 aa11.32□□□□□ -0.6
USE1-203ENST00000593597 BBS7Q8IWZ6 715 aa11.32□□□□□ -0.6
USE1-203ENST00000593597 NUP93Q8N1F7 819 aa11.32□□□□□ -0.6
USE1-203ENST00000593597 DDX1Q92499 740 aaKnown RBP11.32□□□□□ -0.6
USE1-203ENST00000593597 TWNKQ96RR1 684 aa11.32□□□□□ -0.6
USE1-203ENST00000593597 PNKPQ96T60 521 aa11.32□□□□□ -0.6
USE1-203ENST00000593597 TMEM121BQ9BXQ6 578 aaPredicted RBP11.32□□□□□ -0.6
USE1-203ENST00000593597 LRRC27Q9C0I9 530 aa11.32□□□□□ -0.6
USE1-203ENST00000593597 MAGEF1Q9HAY2 307 aa11.32□□□□□ -0.6
USE1-203ENST00000593597 TMEM74BQ9NUR3 256 aa11.32□□□□□ -0.6
USE1-203ENST00000593597 OSER1Q9NX31 292 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms