RNA–Protein interactions for RNA: ENST00000593425.5

LIG1-205, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-205ENST00000593425 YWHAQP27348 245 aa17.38■□□□□ 0.37
LIG1-205ENST00000593425 EIF2DP41214 584 aaKnown RBP17.38■□□□□ 0.37
LIG1-205ENST00000593425 KIR2DL1P43626 348 aaPredicted RBP17.38■□□□□ 0.37
LIG1-205ENST00000593425 DHPSP49366 369 aaPredicted RBP17.38■□□□□ 0.37
LIG1-205ENST00000593425 CDH8P55286 799 aa17.38■□□□□ 0.37
LIG1-205ENST00000593425 TRPC3Q13507 836 aa17.38■□□□□ 0.37
LIG1-205ENST00000593425 BMT2Q1RMZ1 405 aa17.38■□□□□ 0.37
LIG1-205ENST00000593425 DDX42Q86XP3 938 aaKnown RBP eCLIP17.38■□□□□ 0.37
LIG1-205ENST00000593425 PHTF2Q8N3S3 785 aa17.38■□□□□ 0.37
LIG1-205ENST00000593425 FRMD1Q8N878 549 aa17.38■□□□□ 0.37
LIG1-205ENST00000593425 IQUBQ8NA54 791 aa17.38■□□□□ 0.37
LIG1-205ENST00000593425 FBXO32Q969P5 355 aa17.38■□□□□ 0.37
LIG1-205ENST00000593425 ARHGEF4Q9NR80 690 aa17.38■□□□□ 0.37
LIG1-205ENST00000593425 CNOT1A5YKK6 2376 aaKnown RBP17.37■□□□□ 0.37
LIG1-205ENST00000593425 CDX4O14627 284 aaPredicted RBP17.37■□□□□ 0.37
LIG1-205ENST00000593425 KHNYNO15037 678 aaKnown RBP17.37■□□□□ 0.37
LIG1-205ENST00000593425 CUTAO60888 179 aa17.37■□□□□ 0.37
LIG1-205ENST00000593425 ADAM23O75077 832 aa17.37■□□□□ 0.37
LIG1-205ENST00000593425 ADH1CP00326 375 aa17.37■□□□□ 0.37
LIG1-205ENST00000593425 ATICP31939 592 aa17.37■□□□□ 0.37
LIG1-205ENST00000593425 SNRPFP62306 86 aaKnown RBP17.37■□□□□ 0.37
LIG1-205ENST00000593425 LY6G5CQ5SRR4 150 aa17.37■□□□□ 0.37
LIG1-205ENST00000593425 PAQR9Q6ZVX9 377 aa17.37■□□□□ 0.37
LIG1-205ENST00000593425 FAM35AQ86V20 835 aa17.37■□□□□ 0.37
LIG1-205ENST00000593425 C12orf56Q8IXR9 622 aa17.37■□□□□ 0.37
LIG1-205ENST00000593425 PDZD8Q8NEN9 1154 aa17.37■□□□□ 0.37
LIG1-205ENST00000593425 SCAMP5Q8TAC9 235 aa17.37■□□□□ 0.37
LIG1-205ENST00000593425 WBP2Q969T9 261 aa17.37■□□□□ 0.37
LIG1-205ENST00000593425 SYAP1Q96A49 352 aaPredicted RBP17.37■□□□□ 0.37
LIG1-205ENST00000593425 SDCBP2Q9H190 292 aa17.37■□□□□ 0.37
LIG1-205ENST00000593425 CCSER2Q9H7U1 834 aa17.37■□□□□ 0.37
LIG1-205ENST00000593425 SLC39A2Q9NP94 309 aa17.37■□□□□ 0.37
LIG1-205ENST00000593425 TMEM9BQ9NQ34 198 aa17.37■□□□□ 0.37
LIG1-205ENST00000593425 LAMA1P25391 3075 aa17.36■□□□□ 0.37
LIG1-205ENST00000593425 A0A0A0MRY4 1105 aa17.36■□□□□ 0.37
LIG1-205ENST00000593425 K7ELQ4 463 aaPredicted RBP17.36■□□□□ 0.37
LIG1-205ENST00000593425 TNFRSF10BO14763 440 aa17.36■□□□□ 0.37
LIG1-205ENST00000593425 POLR2DO15514 142 aaKnown RBP17.36■□□□□ 0.37
LIG1-205ENST00000593425 PHACTR2O75167 634 aa17.36■□□□□ 0.37
LIG1-205ENST00000593425 ALDH1A2O94788 518 aa17.36■□□□□ 0.37
LIG1-205ENST00000593425 RTN3O95197 1032 aaPredicted RBP17.36■□□□□ 0.37
LIG1-205ENST00000593425 YEATS4O95619 227 aa17.36■□□□□ 0.37
LIG1-205ENST00000593425 P2RY2P41231 377 aa17.36■□□□□ 0.37
LIG1-205ENST00000593425 SLC5A3P53794 718 aa17.36■□□□□ 0.37
LIG1-205ENST00000593425 IRX4P78413 519 aa17.36■□□□□ 0.37
LIG1-205ENST00000593425 ZNF252P-AS1Q0IIN9 211 aa17.36■□□□□ 0.37
LIG1-205ENST00000593425 SH3PXD2AQ5TCZ1 1133 aa17.36■□□□□ 0.37
LIG1-205ENST00000593425 DAB2IPQ5VWQ8 1189 aa17.36■□□□□ 0.37
LIG1-205ENST00000593425 SCARA5Q6ZMJ2 495 aa17.36■□□□□ 0.37
LIG1-205ENST00000593425 ARMCX6Q7L4S7 300 aa17.36■□□□□ 0.37
LIG1-205ENST00000593425 WHAMMQ8TF30 809 aa17.36■□□□□ 0.37
LIG1-205ENST00000593425 OVCA2Q8WZ82 227 aa17.36■□□□□ 0.37
LIG1-205ENST00000593425 PIGKQ92643 395 aa17.36■□□□□ 0.37
LIG1-205ENST00000593425 ZNF396Q96N95 335 aaPredicted RBP17.36■□□□□ 0.37
LIG1-205ENST00000593425 VRTNQ9H8Y1 702 aa17.36■□□□□ 0.37
LIG1-205ENST00000593425 TBC1D14Q9P2M4 693 aa17.36■□□□□ 0.37
LIG1-205ENST00000593425 CHORDC1Q9UHD1 332 aaPredicted RBP17.36■□□□□ 0.37
LIG1-205ENST00000593425 MBD1Q9UIS9 605 aaPredicted RBP17.36■□□□□ 0.37
LIG1-205ENST00000593425 CIZ1Q9ULV3 898 aaPredicted RBP17.36■□□□□ 0.37
LIG1-205ENST00000593425 USP24Q9UPU5 2620 aa17.35■□□□□ 0.37
LIG1-205ENST00000593425 CEP192Q8TEP8 1941 aa17.35■□□□□ 0.37
LIG1-205ENST00000593425 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.35■□□□□ 0.37
LIG1-205ENST00000593425 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa17.35■□□□□ 0.37
LIG1-205ENST00000593425 E2F8A0AVK6 867 aa17.35■□□□□ 0.37
LIG1-205ENST00000593425 LRRIQ3A6PVS8 624 aaPredicted RBP17.35■□□□□ 0.37
LIG1-205ENST00000593425 EXOC3O60645 756 aa17.35■□□□□ 0.37
LIG1-205ENST00000593425 GRIA2P42262 883 aa17.35■□□□□ 0.37
LIG1-205ENST00000593425 GAD2Q05329 585 aa17.35■□□□□ 0.37
LIG1-205ENST00000593425 BIRC3Q13489 604 aa17.35■□□□□ 0.37
LIG1-205ENST00000593425 CUL4BQ13620 913 aa17.35■□□□□ 0.37
LIG1-205ENST00000593425 ZNF699Q32M78 642 aa17.35■□□□□ 0.37
LIG1-205ENST00000593425 HSF5Q4G112 596 aaPredicted RBP17.35■□□□□ 0.37
LIG1-205ENST00000593425 EOGTQ5NDL2 527 aa17.35■□□□□ 0.37
LIG1-205ENST00000593425 HECTD3Q5T447 861 aa17.35■□□□□ 0.37
LIG1-205ENST00000593425 FOXD4L5Q5VV16 416 aaPredicted RBP17.35■□□□□ 0.37
LIG1-205ENST00000593425 BBS7Q8IWZ6 715 aa17.35■□□□□ 0.37
LIG1-205ENST00000593425 ETFBKMTQ8IXQ9 262 aa17.35■□□□□ 0.37
LIG1-205ENST00000593425 TMEFF1Q8IYR6 380 aa17.35■□□□□ 0.37
LIG1-205ENST00000593425 FUKQ8N0W3 1084 aa17.35■□□□□ 0.37
LIG1-205ENST00000593425 NAT16Q8N8M0 369 aa17.35■□□□□ 0.37
LIG1-205ENST00000593425 HMGB4Q8WW32 186 aa17.35■□□□□ 0.37
LIG1-205ENST00000593425 FOXD4L4Q8WXT5 416 aaPredicted RBP17.35■□□□□ 0.37
LIG1-205ENST00000593425 MED10Q9BTT4 135 aa17.35■□□□□ 0.37
LIG1-205ENST00000593425 MAGEF1Q9HAY2 307 aa17.35■□□□□ 0.37
LIG1-205ENST00000593425 POLMQ9NP87 494 aaPredicted RBP17.35■□□□□ 0.37
LIG1-205ENST00000593425 DMAP1Q9NPF5 467 aaPredicted RBP17.35■□□□□ 0.37
LIG1-205ENST00000593425 IL37Q9NZH6 218 aa17.35■□□□□ 0.37
LIG1-205ENST00000593425 GMIPQ9P107 970 aa17.35■□□□□ 0.37
LIG1-205ENST00000593425 BCCIPQ9P287 314 aaKnown RBP eCLIP17.35■□□□□ 0.37
LIG1-205ENST00000593425 CHD8Q9HCK8 2581 aa17.35■□□□□ 0.37
LIG1-205ENST00000593425 TCRBV21S2A2A0A5A6 115 aa17.34■□□□□ 0.37
LIG1-205ENST00000593425 PALM2-AKAP2B1ALY0 433 aaPredicted RBP17.34■□□□□ 0.37
LIG1-205ENST00000593425 ATP8B3O60423 1300 aa17.34■□□□□ 0.37
LIG1-205ENST00000593425 CLSTN1O94985 981 aa17.34■□□□□ 0.37
LIG1-205ENST00000593425 VNN1O95497 513 aa17.34■□□□□ 0.37
LIG1-205ENST00000593425 ZDHHC11BP0C7U3 371 aa17.34■□□□□ 0.37
LIG1-205ENST00000593425 MYH10P35580 1976 aa17.34■□□□□ 0.37
LIG1-205ENST00000593425 PTGER3P43115 390 aa17.34■□□□□ 0.37
LIG1-205ENST00000593425 AFMP43652 599 aa17.34■□□□□ 0.37
LIG1-205ENST00000593425 PGFP49763 221 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms