RNA–Protein interactions for RNA: ENST00000593254.1

H3F3B-213, Transcript of H3 histone family member 3B, humanhuman

TSL 5

Gene H3F3B, Length 894 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-213ENST00000593254 TRAV19A0A0A6YYK7 116 aa14.04□□□□□ -0.16
H3F3B-213ENST00000593254 C2orf78A6NCI8 922 aa14.04□□□□□ -0.16
H3F3B-213ENST00000593254 GIPC1O14908 333 aa14.04□□□□□ -0.16
H3F3B-213ENST00000593254 USP17L7P0C7H9 530 aa14.04□□□□□ -0.16
H3F3B-213ENST00000593254 NR2F2P24468 414 aa14.04□□□□□ -0.16
H3F3B-213ENST00000593254 PXNP49023 591 aaPredicted RBP14.04□□□□□ -0.16
H3F3B-213ENST00000593254 CACNA2D1P54289 1103 aa14.04□□□□□ -0.16
H3F3B-213ENST00000593254 CDH8P55286 799 aa14.04□□□□□ -0.16
H3F3B-213ENST00000593254 USP46P62068 366 aa14.04□□□□□ -0.16
H3F3B-213ENST00000593254 NOP14P78316 857 aaKnown RBP14.04□□□□□ -0.16
H3F3B-213ENST00000593254 USP4Q13107 963 aa14.04□□□□□ -0.16
H3F3B-213ENST00000593254 PLK5Q496M5 336 aa14.04□□□□□ -0.16
H3F3B-213ENST00000593254 ZCWPW2Q504Y3 356 aa14.04□□□□□ -0.16
H3F3B-213ENST00000593254 TCEAL6Q6IPX3 200 aa14.04□□□□□ -0.16
H3F3B-213ENST00000593254 SV2AQ7L0J3 742 aa14.04□□□□□ -0.16
H3F3B-213ENST00000593254 TCEAL3Q969E4 200 aa14.04□□□□□ -0.16
H3F3B-213ENST00000593254 DCBLD2Q96PD2 775 aa14.04□□□□□ -0.16
H3F3B-213ENST00000593254 ZNF518BQ9C0D4 1074 aa14.04□□□□□ -0.16
H3F3B-213ENST00000593254 TRPC7Q9HCX4 862 aa14.04□□□□□ -0.16
H3F3B-213ENST00000593254 HPS4Q9NQG7 708 aa14.04□□□□□ -0.16
H3F3B-213ENST00000593254 EHD2Q9NZN4 543 aa14.04□□□□□ -0.16
H3F3B-213ENST00000593254 MAPK8IP1Q9UQF2 711 aa14.04□□□□□ -0.16
H3F3B-213ENST00000593254 IGSF10Q6WRI0 2623 aa14.03□□□□□ -0.16
H3F3B-213ENST00000593254 TMEM8BA6NDV4 472 aa14.03□□□□□ -0.16
H3F3B-213ENST00000593254 OTOL1A6NHN0 477 aaPredicted RBP14.03□□□□□ -0.16
H3F3B-213ENST00000593254 ASS1P00966 412 aaKnown RBP14.03□□□□□ -0.16
H3F3B-213ENST00000593254 CKMP06732 381 aa14.03□□□□□ -0.16
H3F3B-213ENST00000593254 CCDC192P0DO97 292 aa14.03□□□□□ -0.16
H3F3B-213ENST00000593254 TCF3P15923 654 aa14.03□□□□□ -0.16
H3F3B-213ENST00000593254 NOVA1P51513 510 aaKnown RBP14.03□□□□□ -0.16
H3F3B-213ENST00000593254 NUCB2P80303 420 aa14.03□□□□□ -0.16
H3F3B-213ENST00000593254 RUNX3Q13761 415 aa14.03□□□□□ -0.16
H3F3B-213ENST00000593254 MTF1Q14872 753 aa14.03□□□□□ -0.16
H3F3B-213ENST00000593254 ZNF77Q15935 545 aa14.03□□□□□ -0.16
H3F3B-213ENST00000593254 SGSM1Q2NKQ1 1148 aa14.03□□□□□ -0.16
H3F3B-213ENST00000593254 TRIM68Q6AZZ1 485 aa14.03□□□□□ -0.16
H3F3B-213ENST00000593254 CC2D1AQ6P1N0 951 aaPredicted RBP14.03□□□□□ -0.16
H3F3B-213ENST00000593254 SCARA5Q6ZMJ2 495 aa14.03□□□□□ -0.16
H3F3B-213ENST00000593254 INTS8Q75QN2 995 aaKnown RBP14.03□□□□□ -0.16
H3F3B-213ENST00000593254 FMR1NBQ8N0W7 255 aaPredicted RBP14.03□□□□□ -0.16
H3F3B-213ENST00000593254 ARL14EPQ8N8R7 260 aaPredicted RBP14.03□□□□□ -0.16
H3F3B-213ENST00000593254 TAF4BQ92750 862 aa14.03□□□□□ -0.16
H3F3B-213ENST00000593254 GATA6Q92908 595 aa14.03□□□□□ -0.16
H3F3B-213ENST00000593254 ELMO3Q96BJ8 720 aa14.03□□□□□ -0.16
H3F3B-213ENST00000593254 CHFRQ96EP1 664 aa14.03□□□□□ -0.16
H3F3B-213ENST00000593254 CCDC34Q96HJ3 373 aa14.03□□□□□ -0.16
H3F3B-213ENST00000593254 TNIP3Q96KP6 325 aa14.03□□□□□ -0.16
H3F3B-213ENST00000593254 CYP2S1Q96SQ9 504 aa14.03□□□□□ -0.16
H3F3B-213ENST00000593254 B3GNT5Q9BYG0 378 aa14.03□□□□□ -0.16
H3F3B-213ENST00000593254 SDCBP2Q9H190 292 aa14.03□□□□□ -0.16
H3F3B-213ENST00000593254 EBF3Q9H4W6 596 aa14.03□□□□□ -0.16
H3F3B-213ENST00000593254 TRPM5Q9NZQ8 1165 aa14.03□□□□□ -0.16
H3F3B-213ENST00000593254 MYO16Q9Y6X6 1858 aa14.03□□□□□ -0.16
H3F3B-213ENST00000593254 MYOFQ9NZM1 2061 aa14.02□□□□□ -0.16
H3F3B-213ENST00000593254 CLDN5O00501 218 aa14.02□□□□□ -0.17
H3F3B-213ENST00000593254 CLSTN1O94985 981 aa14.02□□□□□ -0.17
H3F3B-213ENST00000593254 HLA-DRAP01903 254 aa14.02□□□□□ -0.17
H3F3B-213ENST00000593254 P4HA1P13674 534 aa14.02□□□□□ -0.17
H3F3B-213ENST00000593254 PFKLP17858 780 aa14.02□□□□□ -0.17
H3F3B-213ENST00000593254 RPL13P26373 211 aaKnown RBP14.02□□□□□ -0.17
H3F3B-213ENST00000593254 ASPAP45381 313 aa14.02□□□□□ -0.17
H3F3B-213ENST00000593254 PPP3CCP48454 512 aa14.02□□□□□ -0.17
H3F3B-213ENST00000593254 PDE6CP51160 858 aa14.02□□□□□ -0.17
H3F3B-213ENST00000593254 VAMP7P51809 220 aa14.02□□□□□ -0.17
H3F3B-213ENST00000593254 ENPEPQ07075 957 aa14.02□□□□□ -0.17
H3F3B-213ENST00000593254 ZNF252P-AS1Q0IIN9 211 aa14.02□□□□□ -0.17
H3F3B-213ENST00000593254 PDGFRLQ15198 375 aa14.02□□□□□ -0.17
H3F3B-213ENST00000593254 TMEM196Q5HYL7 178 aa14.02□□□□□ -0.17
H3F3B-213ENST00000593254 PAQR9Q6ZVX9 377 aa14.02□□□□□ -0.17
H3F3B-213ENST00000593254 CAMKK1Q8N5S9 505 aa14.02□□□□□ -0.17
H3F3B-213ENST00000593254 EDEM2Q9BV94 578 aa14.02□□□□□ -0.17
H3F3B-213ENST00000593254 ADAM33Q9BZ11 813 aa14.02□□□□□ -0.17
H3F3B-213ENST00000593254 DUSP15Q9H1R2 295 aaPredicted RBP14.02□□□□□ -0.17
H3F3B-213ENST00000593254 ARHGAP26Q9UNA1 814 aa14.02□□□□□ -0.17
H3F3B-213ENST00000593254 KIAA1549LQ6ZVL6 1849 aa14.01□□□□□ -0.17
H3F3B-213ENST00000593254 FLNBO75369 2602 aaKnown RBP14.01□□□□□ -0.17
H3F3B-213ENST00000593254 GON4LQ3T8J9 2241 aa14.01□□□□□ -0.17
H3F3B-213ENST00000593254 ATP8B3O60423 1300 aa14.01□□□□□ -0.17
H3F3B-213ENST00000593254 ZNF840PA6NDX5 716 aa14.01□□□□□ -0.17
H3F3B-213ENST00000593254 SRRM3A6NNA2 597 aaPredicted RBP14.01□□□□□ -0.17
H3F3B-213ENST00000593254 C4orf47A7E2U8 309 aa14.01□□□□□ -0.17
H3F3B-213ENST00000593254 OLFM2O95897 454 aa14.01□□□□□ -0.17
H3F3B-213ENST00000593254 ARSAP15289 507 aa14.01□□□□□ -0.17
H3F3B-213ENST00000593254 HDCP19113 662 aa14.01□□□□□ -0.17
H3F3B-213ENST00000593254 PSMC2P35998 433 aaKnown RBP14.01□□□□□ -0.17
H3F3B-213ENST00000593254 PIK3CAP42336 1068 aa14.01□□□□□ -0.17
H3F3B-213ENST00000593254 MCCD1P59942 119 aaPredicted RBP14.01□□□□□ -0.17
H3F3B-213ENST00000593254 ADAM9Q13443 819 aa14.01□□□□□ -0.17
H3F3B-213ENST00000593254 PNOCQ13519 176 aa14.01□□□□□ -0.17
H3F3B-213ENST00000593254 EDRF1Q3B7T1 1238 aa14.01□□□□□ -0.17
H3F3B-213ENST00000593254 SPOPLQ6IQ16 392 aa14.01□□□□□ -0.17
H3F3B-213ENST00000593254 FSTL4Q6MZW2 842 aa14.01□□□□□ -0.17
H3F3B-213ENST00000593254 FAM35AQ86V20 835 aa14.01□□□□□ -0.17
H3F3B-213ENST00000593254 FAM186BQ8IYM0 893 aa14.01□□□□□ -0.17
H3F3B-213ENST00000593254 ENGASEQ8NFI3 743 aa14.01□□□□□ -0.17
H3F3B-213ENST00000593254 OSCP1Q8WVF1 389 aa14.01□□□□□ -0.17
H3F3B-213ENST00000593254 SLC8A2Q9UPR5 921 aa14.01□□□□□ -0.17
H3F3B-213ENST00000593254 LNP1A1A4G5 178 aa14□□□□□ -0.17
H3F3B-213ENST00000593254 BCLAF3A2AJT9 711 aaKnown RBP14□□□□□ -0.17
H3F3B-213ENST00000593254 GOLGA6L4A6NEF3 574 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms