RNA–Protein interactions for RNA: ENST00000593053.1

PRKCSH-218, Transcript of protein kinase C substrate 80K-H, human

TSL 5

Gene PRKCSH, Length 588 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRKCSH-218	ENST00000593053	KIF26A	Q9ULI4	1882 aa	Predicted RBP	13.87	□□□□□ -0.19
PRKCSH-218	ENST00000593053	OTOGL	Q3ZCN5	2332 aa		13.86	□□□□□ -0.19
PRKCSH-218	ENST00000593053	HR	O43593	1189 aa		13.86	□□□□□ -0.19
PRKCSH-218	ENST00000593053	ATG13	O75143	517 aa		13.86	□□□□□ -0.19
PRKCSH-218	ENST00000593053	FAM200B	P0CF97	657 aa		13.86	□□□□□ -0.19
PRKCSH-218	ENST00000593053	GTF2H1	P32780	548 aa		13.86	□□□□□ -0.19
PRKCSH-218	ENST00000593053	MXI1	P50539	228 aa		13.86	□□□□□ -0.19
PRKCSH-218	ENST00000593053	SIM2	Q14190	667 aa	Predicted RBP	13.86	□□□□□ -0.19
PRKCSH-218	ENST00000593053	FBXO43	Q4G163	708 aa		13.86	□□□□□ -0.19
PRKCSH-218	ENST00000593053	HECTD3	Q5T447	861 aa		13.86	□□□□□ -0.19
PRKCSH-218	ENST00000593053	WHAMM	Q8TF30	809 aa		13.86	□□□□□ -0.19
PRKCSH-218	ENST00000593053	EZH1	Q92800	747 aa	Predicted RBP	13.86	□□□□□ -0.19
PRKCSH-218	ENST00000593053	SEMA4D	Q92854	862 aa		13.86	□□□□□ -0.19
PRKCSH-218	ENST00000593053	SMARCE1	Q969G3	411 aa		13.86	□□□□□ -0.19
PRKCSH-218	ENST00000593053	JAKMIP2	Q96AA8	810 aa		13.86	□□□□□ -0.19
PRKCSH-218	ENST00000593053	HNRNPAB	Q99729	332 aa	Known RBP	13.86	□□□□□ -0.19
PRKCSH-218	ENST00000593053	TSG101	Q99816	390 aa		13.86	□□□□□ -0.19
PRKCSH-218	ENST00000593053	CCSER2	Q9H7U1	834 aa		13.86	□□□□□ -0.19
PRKCSH-218	ENST00000593053	CSNK1G1	Q9HCP0	422 aa		13.86	□□□□□ -0.19
PRKCSH-218	ENST00000593053	POLR3B	Q9NW08	1133 aa	Predicted RBP	13.86	□□□□□ -0.19
PRKCSH-218	ENST00000593053	COMMD8	Q9NX08	183 aa		13.86	□□□□□ -0.19
PRKCSH-218	ENST00000593053	IL37	Q9NZH6	218 aa		13.86	□□□□□ -0.19
PRKCSH-218	ENST00000593053	GMEB2	Q9UKD1	530 aa		13.86	□□□□□ -0.19
PRKCSH-218	ENST00000593053	SLC8A2	Q9UPR5	921 aa		13.86	□□□□□ -0.19
PRKCSH-218	ENST00000593053	PCDHA5	Q9Y5H7	936 aa		13.86	□□□□□ -0.19
PRKCSH-218	ENST00000593053	OBSL1	O75147	1896 aa		13.86	□□□□□ -0.19
PRKCSH-218	ENST00000593053	FAM92A	A1XBS5	289 aa		13.85	□□□□□ -0.19
PRKCSH-218	ENST00000593053	SLC9A3R1	O14745	358 aa	Predicted RBP	13.85	□□□□□ -0.19
PRKCSH-218	ENST00000593053	STX10	O60499	249 aa		13.85	□□□□□ -0.19
PRKCSH-218	ENST00000593053	CILP	O75339	1184 aa		13.85	□□□□□ -0.19
PRKCSH-218	ENST00000593053	CYP17A1	P05093	508 aa		13.85	□□□□□ -0.19
PRKCSH-218	ENST00000593053	ZDHHC11B	P0C7U3	371 aa		13.85	□□□□□ -0.19
PRKCSH-218	ENST00000593053	HOXA6	P31267	233 aa		13.85	□□□□□ -0.19
PRKCSH-218	ENST00000593053	PXN	P49023	591 aa	Predicted RBP	13.85	□□□□□ -0.19
PRKCSH-218	ENST00000593053	PMS1	P54277	932 aa	Known RBP	13.85	□□□□□ -0.19
PRKCSH-218	ENST00000593053	MCCD1	P59942	119 aa	Predicted RBP	13.85	□□□□□ -0.19
PRKCSH-218	ENST00000593053	COBLL1	Q53SF7	1204 aa		13.85	□□□□□ -0.19
PRKCSH-218	ENST00000593053	SNX30	Q5VWJ9	437 aa		13.85	□□□□□ -0.19
PRKCSH-218	ENST00000593053	ANKRD40	Q6AI12	368 aa		13.85	□□□□□ -0.19
PRKCSH-218	ENST00000593053	WDR5B	Q86VZ2	330 aa		13.85	□□□□□ -0.19
PRKCSH-218	ENST00000593053	DDX42	Q86XP3	938 aa	Known RBP eCLIP	13.85	□□□□□ -0.19
PRKCSH-218	ENST00000593053	ADGRG2	Q8IZP9	1017 aa		13.85	□□□□□ -0.19
PRKCSH-218	ENST00000593053	RPLP0P6	Q8NHW5	317 aa		13.85	□□□□□ -0.19
PRKCSH-218	ENST00000593053	SPATA20	Q8TB22	786 aa		13.85	□□□□□ -0.19
PRKCSH-218	ENST00000593053	CYFIP2	Q96F07	1278 aa		13.85	□□□□□ -0.19
PRKCSH-218	ENST00000593053	ZFR	Q96KR1	1074 aa	Known RBP	13.85	□□□□□ -0.19
PRKCSH-218	ENST00000593053	FBXO44	Q9H4M3	255 aa		13.85	□□□□□ -0.19
PRKCSH-218	ENST00000593053	HOOK1	Q9UJC3	728 aa	Known RBP	13.85	□□□□□ -0.19
PRKCSH-218	ENST00000593053	FANCM	Q8IYD8	2048 aa		13.85	□□□□□ -0.19
PRKCSH-218	ENST00000593053	SLC16A3	O15427	465 aa	Known RBP	13.84	□□□□□ -0.19
PRKCSH-218	ENST00000593053	CNR2	P34972	360 aa		13.84	□□□□□ -0.19
PRKCSH-218	ENST00000593053	OPRD1	P41143	372 aa		13.84	□□□□□ -0.19
PRKCSH-218	ENST00000593053	PGF	P49763	221 aa		13.84	□□□□□ -0.19
PRKCSH-218	ENST00000593053	TUB	P50607	506 aa		13.84	□□□□□ -0.19
PRKCSH-218	ENST00000593053	DHCR24	Q15392	516 aa		13.84	□□□□□ -0.19
PRKCSH-218	ENST00000593053	GAB4	Q2WGN9	574 aa		13.84	□□□□□ -0.19
PRKCSH-218	ENST00000593053	ZNF394	Q53GI3	561 aa		13.84	□□□□□ -0.19
PRKCSH-218	ENST00000593053	DCAF17	Q5H9S7	520 aa	Predicted RBP	13.84	□□□□□ -0.19
PRKCSH-218	ENST00000593053	TCERG1L	Q5VWI1	586 aa		13.84	□□□□□ -0.19
PRKCSH-218	ENST00000593053	LAIR1	Q6GTX8	287 aa		13.84	□□□□□ -0.19
PRKCSH-218	ENST00000593053	CLEC20A	Q6ZU45	233 aa		13.84	□□□□□ -0.19
PRKCSH-218	ENST00000593053	CEP68	Q76N32	757 aa		13.84	□□□□□ -0.19
PRKCSH-218	ENST00000593053	GPRIN1	Q7Z2K8	1008 aa		13.84	□□□□□ -0.19
PRKCSH-218	ENST00000593053	KIAA1958	Q8N8K9	716 aa		13.84	□□□□□ -0.19
PRKCSH-218	ENST00000593053	FBXL13	Q8NEE6	735 aa		13.84	□□□□□ -0.19
PRKCSH-218	ENST00000593053	RMDN1	Q96DB5	314 aa		13.84	□□□□□ -0.19
PRKCSH-218	ENST00000593053	TIGD1	Q96MW7	591 aa		13.84	□□□□□ -0.19
PRKCSH-218	ENST00000593053	NACA2	Q9H009	215 aa		13.84	□□□□□ -0.19
PRKCSH-218	ENST00000593053	RAB20	Q9NX57	234 aa		13.84	□□□□□ -0.19
PRKCSH-218	ENST00000593053	PTPRD	P23468	1912 aa		13.84	□□□□□ -0.19
PRKCSH-218	ENST00000593053	DENND4C	Q5VZ89	1909 aa		13.84	□□□□□ -0.19
PRKCSH-218	ENST00000593053	SPTBN4	Q9H254	2564 aa		13.83	□□□□□ -0.19
PRKCSH-218	ENST00000593053	E2F8	A0AVK6	867 aa		13.83	□□□□□ -0.2
PRKCSH-218	ENST00000593053	TRIM49B	A6NDI0	452 aa		13.83	□□□□□ -0.2
PRKCSH-218	ENST00000593053	HHLA1	C9JL84	531 aa		13.83	□□□□□ -0.2
PRKCSH-218	ENST00000593053	CYP26A1	O43174	497 aa		13.83	□□□□□ -0.2
PRKCSH-218	ENST00000593053	TLR5	O60602	858 aa		13.83	□□□□□ -0.2
PRKCSH-218	ENST00000593053	ACO1	P21399	889 aa	Known RBP	13.83	□□□□□ -0.2
PRKCSH-218	ENST00000593053	SEC13	P55735	322 aa		13.83	□□□□□ -0.2
PRKCSH-218	ENST00000593053	FKBP3	Q00688	224 aa	Known RBP	13.83	□□□□□ -0.2
PRKCSH-218	ENST00000593053	CBWD6	Q4V339	395 aa		13.83	□□□□□ -0.2
PRKCSH-218	ENST00000593053	CBWD3	Q5JTY5	395 aa		13.83	□□□□□ -0.2
PRKCSH-218	ENST00000593053	CBWD5	Q5RIA9	395 aa		13.83	□□□□□ -0.2
PRKCSH-218	ENST00000593053	ISM2	Q6H9L7	571 aa		13.83	□□□□□ -0.2
PRKCSH-218	ENST00000593053	RHBDF2	Q6PJF5	856 aa		13.83	□□□□□ -0.2
PRKCSH-218	ENST00000593053	ARHGAP30	Q7Z6I6	1101 aa	Predicted RBP	13.83	□□□□□ -0.2
PRKCSH-218	ENST00000593053	ZC3H3	Q8IXZ2	948 aa	Known RBP	13.83	□□□□□ -0.2
PRKCSH-218	ENST00000593053	GPR161	Q8N6U8	529 aa	Known RBP	13.83	□□□□□ -0.2
PRKCSH-218	ENST00000593053	HEXIM2	Q96MH2	286 aa	Known RBP	13.83	□□□□□ -0.2
PRKCSH-218	ENST00000593053	HHIP	Q96QV1	700 aa		13.83	□□□□□ -0.2
PRKCSH-218	ENST00000593053	ARID3A	Q99856	593 aa		13.83	□□□□□ -0.2
PRKCSH-218	ENST00000593053	GTPBP4	Q9BZE4	634 aa	Known RBP	13.83	□□□□□ -0.2
PRKCSH-218	ENST00000593053	DNAI2	Q9GZS0	605 aa		13.83	□□□□□ -0.2
PRKCSH-218	ENST00000593053	TLR8	Q9NR97	1041 aa	Known RBP	13.83	□□□□□ -0.2
PRKCSH-218	ENST00000593053	CISH	Q9NSE2	258 aa		13.83	□□□□□ -0.2
PRKCSH-218	ENST00000593053	TBC1D14	Q9P2M4	693 aa		13.83	□□□□□ -0.2
PRKCSH-218	ENST00000593053	USP18	Q9UMW8	372 aa		13.83	□□□□□ -0.2
PRKCSH-218	ENST00000593053	SCML2	Q9UQR0	700 aa		13.83	□□□□□ -0.2
PRKCSH-218	ENST00000593053	SH3BP1	Q9Y3L3	701 aa		13.83	□□□□□ -0.2
PRKCSH-218	ENST00000593053	GREB1	Q4ZG55	1949 aa		13.82	□□□□□ -0.2

Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms