RNA–Protein interactions for RNA: ENST00000592533.5

ZNF540-210, Transcript of zinc finger protein 540, humanhuman

APPRIS P3 TSL 2 BASIC

Gene ZNF540, Length 3,147 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-210ENST00000592533 ACADSP16219 412 aa12.1□□□□□ -0.47
ZNF540-210ENST00000592533 ATP6V1C1P21283 382 aa12.1□□□□□ -0.47
ZNF540-210ENST00000592533 ABL2P42684 1182 aa12.1□□□□□ -0.47
ZNF540-210ENST00000592533 ARFIP2P53365 341 aa12.1□□□□□ -0.47
ZNF540-210ENST00000592533 MBTD1Q05BQ5 628 aa12.1□□□□□ -0.47
ZNF540-210ENST00000592533 INCA1Q0VD86 236 aa12.1□□□□□ -0.47
ZNF540-210ENST00000592533 FAAP100Q0VG06 881 aa12.1□□□□□ -0.47
ZNF540-210ENST00000592533 ANGEL2Q5VTE6 544 aaKnown RBP12.1□□□□□ -0.47
ZNF540-210ENST00000592533 TTC39BQ5VTQ0 682 aaPredicted RBP12.1□□□□□ -0.47
ZNF540-210ENST00000592533 NSL1Q96IY1 281 aa12.1□□□□□ -0.47
ZNF540-210ENST00000592533 ADAM33Q9BZ11 813 aa12.1□□□□□ -0.47
ZNF540-210ENST00000592533 CDT1Q9H211 546 aa12.1□□□□□ -0.47
ZNF540-210ENST00000592533 SYNCQ9H7C4 482 aa12.1□□□□□ -0.47
ZNF540-210ENST00000592533 ARL8BQ9NVJ2 186 aa12.1□□□□□ -0.47
ZNF540-210ENST00000592533 HEY2Q9UBP5 337 aa12.1□□□□□ -0.47
ZNF540-210ENST00000592533 NXF1Q9UBU9 619 aaKnown RBP12.1□□□□□ -0.47
ZNF540-210ENST00000592533 PCSK1NQ9UHG2 260 aa12.1□□□□□ -0.47
ZNF540-210ENST00000592533 PPP2R3BQ9Y5P8 575 aa12.1□□□□□ -0.47
ZNF540-210ENST00000592533 A6NHS1 94 aa12.09□□□□□ -0.47
ZNF540-210ENST00000592533 STAU1O95793 577 aaKnown RBP12.09□□□□□ -0.47
ZNF540-210ENST00000592533 INHBAP08476 426 aa12.09□□□□□ -0.47
ZNF540-210ENST00000592533 GPD1P21695 349 aa12.09□□□□□ -0.47
ZNF540-210ENST00000592533 TGM2P21980 687 aa12.09□□□□□ -0.47
ZNF540-210ENST00000592533 YWHAZP63104 245 aaKnown RBP12.09□□□□□ -0.47
ZNF540-210ENST00000592533 PDK2Q15119 407 aa12.09□□□□□ -0.47
ZNF540-210ENST00000592533 FAM187BQ17R55 369 aa12.09□□□□□ -0.47
ZNF540-210ENST00000592533 LRRC6Q86X45 466 aa12.09□□□□□ -0.47
ZNF540-210ENST00000592533 RAB3IL1Q8TBN0 382 aa12.09□□□□□ -0.47
ZNF540-210ENST00000592533 TEKT4Q8WW24 435 aa12.09□□□□□ -0.47
ZNF540-210ENST00000592533 HSPH1Q92598 858 aa12.09□□□□□ -0.47
ZNF540-210ENST00000592533 LRRC39Q96DD0 335 aa12.09□□□□□ -0.47
ZNF540-210ENST00000592533 C7orf26Q96N11 449 aa12.09□□□□□ -0.47
ZNF540-210ENST00000592533 TMEM120AQ9BXJ8 343 aa12.09□□□□□ -0.47
ZNF540-210ENST00000592533 MIS12Q9H081 205 aa12.09□□□□□ -0.47
ZNF540-210ENST00000592533 SMYD3Q9H7B4 428 aa12.09□□□□□ -0.47
ZNF540-210ENST00000592533 RPF1Q9H9Y2 349 aaKnown RBP12.09□□□□□ -0.47
ZNF540-210ENST00000592533 IKBKGQ9Y6K9 419 aa12.09□□□□□ -0.47
ZNF540-210ENST00000592533 LTBP3Q9NS15 1303 aa12.09□□□□□ -0.47
ZNF540-210ENST00000592533 BCLAF3A2AJT9 711 aaKnown RBP12.09□□□□□ -0.47
ZNF540-210ENST00000592533 GOLGA8RI6L899 631 aa12.09□□□□□ -0.47
ZNF540-210ENST00000592533 MAGEA3P43357 314 aa12.09□□□□□ -0.47
ZNF540-210ENST00000592533 SERPINB4P48594 390 aa12.09□□□□□ -0.47
ZNF540-210ENST00000592533 SLC26A2P50443 739 aa12.09□□□□□ -0.47
ZNF540-210ENST00000592533 POU5F1BQ06416 359 aa12.09□□□□□ -0.47
ZNF540-210ENST00000592533 OVGP1Q12889 678 aa12.09□□□□□ -0.47
ZNF540-210ENST00000592533 EEF1DP3Q658K8 133 aa12.09□□□□□ -0.47
ZNF540-210ENST00000592533 TRNP1Q6NT89 227 aa12.09□□□□□ -0.47
ZNF540-210ENST00000592533 DARS2Q6PI48 645 aaKnown RBP12.09□□□□□ -0.47
ZNF540-210ENST00000592533 C4orf22Q6V702 233 aa12.09□□□□□ -0.47
ZNF540-210ENST00000592533 TRIM42Q8IWZ5 723 aa12.09□□□□□ -0.47
ZNF540-210ENST00000592533 RNF157Q96PX1 679 aa12.09□□□□□ -0.47
ZNF540-210ENST00000592533 ADPGKQ9BRR6 497 aa12.09□□□□□ -0.47
ZNF540-210ENST00000592533 CALN1Q9BXU9 219 aa12.09□□□□□ -0.47
ZNF540-210ENST00000592533 TRIM6Q9C030 488 aaPredicted RBP12.09□□□□□ -0.47
ZNF540-210ENST00000592533 POPDC2Q9HBU9 364 aa12.09□□□□□ -0.47
ZNF540-210ENST00000592533 HMGXB4Q9UGU5 601 aa12.09□□□□□ -0.47
ZNF540-210ENST00000592533 DCTN4Q9UJW0 460 aa12.09□□□□□ -0.47
ZNF540-210ENST00000592533 MCM3APO60318 1980 aa12.09□□□□□ -0.47
ZNF540-210ENST00000592533 WDR91A4D1P6 747 aa12.09□□□□□ -0.47
ZNF540-210ENST00000592533 GSC2O15499 205 aa12.09□□□□□ -0.47
ZNF540-210ENST00000592533 ATP5BP06576 529 aaKnown RBP12.09□□□□□ -0.47
ZNF540-210ENST00000592533 NFICP08651 508 aa12.09□□□□□ -0.47
ZNF540-210ENST00000592533 CXCL8P10145 99 aa12.09□□□□□ -0.47
ZNF540-210ENST00000592533 PTDSS1P48651 473 aaKnown RBP12.09□□□□□ -0.47
ZNF540-210ENST00000592533 HIRAP54198 1017 aaPredicted RBP12.09□□□□□ -0.47
ZNF540-210ENST00000592533 SLC9A4Q6AI14 798 aa12.09□□□□□ -0.47
ZNF540-210ENST00000592533 MCUQ8NE86 351 aa12.09□□□□□ -0.47
ZNF540-210ENST00000592533 TTC8Q8TAM2 541 aa12.09□□□□□ -0.47
ZNF540-210ENST00000592533 SLC16A10Q8TF71 515 aa12.09□□□□□ -0.47
ZNF540-210ENST00000592533 AFG1LQ8WV93 481 aa12.09□□□□□ -0.47
ZNF540-210ENST00000592533 FAM111AQ96PZ2 611 aa12.09□□□□□ -0.47
ZNF540-210ENST00000592533 KLF6Q99612 283 aaPredicted RBP12.09□□□□□ -0.47
ZNF540-210ENST00000592533 C12orf65Q9H3J6 166 aaKnown RBP12.09□□□□□ -0.47
ZNF540-210ENST00000592533 PLAC1Q9HBJ0 212 aa12.09□□□□□ -0.47
ZNF540-210ENST00000592533 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.09□□□□□ -0.47
ZNF540-210ENST00000592533 KIAA1257Q9ULG3 409 aa12.09□□□□□ -0.47
ZNF540-210ENST00000592533 POLR2AP24928 1970 aaKnown RBP12.08□□□□□ -0.47
ZNF540-210ENST00000592533 TRIP11Q15643 1979 aa12.08□□□□□ -0.47
ZNF540-210ENST00000592533 A0A0G2JND7 137 aa12.08□□□□□ -0.48
ZNF540-210ENST00000592533 FZD9O00144 591 aa12.08□□□□□ -0.48
ZNF540-210ENST00000592533 ENTPD5O75356 428 aa12.08□□□□□ -0.48
ZNF540-210ENST00000592533 PIAS1O75925 651 aa12.08□□□□□ -0.48
ZNF540-210ENST00000592533 PYGBP11216 843 aa12.08□□□□□ -0.48
ZNF540-210ENST00000592533 CDH6P55285 790 aa12.08□□□□□ -0.48
ZNF540-210ENST00000592533 CDH8P55286 799 aa12.08□□□□□ -0.48
ZNF540-210ENST00000592533 FAM102AQ5T9C2 384 aaPredicted RBP12.08□□□□□ -0.48
ZNF540-210ENST00000592533 NPNTQ6UXI9 565 aa12.08□□□□□ -0.48
ZNF540-210ENST00000592533 LRRC71Q8N4P6 559 aa12.08□□□□□ -0.48
ZNF540-210ENST00000592533 TTC39CQ8N584 583 aa12.08□□□□□ -0.48
ZNF540-210ENST00000592533 PLD5Q8N7P1 536 aa12.08□□□□□ -0.48
ZNF540-210ENST00000592533 CEP120Q8N960 986 aa12.08□□□□□ -0.48
ZNF540-210ENST00000592533 FAF2Q96CS3 445 aa12.08□□□□□ -0.48
ZNF540-210ENST00000592533 KCNK4Q9NYG8 393 aa12.08□□□□□ -0.48
ZNF540-210ENST00000592533 BTBD7Q9P203 1132 aa12.08□□□□□ -0.48
ZNF540-210ENST00000592533 M0QYV0 167 aa12.08□□□□□ -0.48
ZNF540-210ENST00000592533 B4GALT5O43286 388 aa12.08□□□□□ -0.48
ZNF540-210ENST00000592533 MCF2P10911 925 aa12.08□□□□□ -0.48
ZNF540-210ENST00000592533 P4HA1P13674 534 aa12.08□□□□□ -0.48
ZNF540-210ENST00000592533 IL4RP24394 825 aa12.08□□□□□ -0.48
ZNF540-210ENST00000592533 SERPINB3P29508 390 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms