RNA–Protein interactions for RNA: ENST00000592412.5

CIRBP-238, Transcript of cold inducible RNA binding protein, humanhuman

TSL 4

Gene CIRBP, Length 532 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-238ENST00000592412 EPM2AIP1Q7L775 607 aaPredicted RBP19.46■□□□□ 0.71
CIRBP-238ENST00000592412 HS2ST1Q7LGA3 356 aa19.46■□□□□ 0.71
CIRBP-238ENST00000592412 ETFBKMTQ8IXQ9 262 aa19.46■□□□□ 0.71
CIRBP-238ENST00000592412 PDILTQ8N807 584 aa19.46■□□□□ 0.71
CIRBP-238ENST00000592412 WBP2Q969T9 261 aa19.46■□□□□ 0.71
CIRBP-238ENST00000592412 USP28Q96RU2 1077 aa19.46■□□□□ 0.71
CIRBP-238ENST00000592412 B3GNT5Q9BYG0 378 aa19.46■□□□□ 0.71
CIRBP-238ENST00000592412 ARHGEF4Q9NR80 690 aa19.46■□□□□ 0.71
CIRBP-238ENST00000592412 EHD2Q9NZN4 543 aa19.46■□□□□ 0.71
CIRBP-238ENST00000592412 R3HCC1Q9Y3T6 440 aaKnown RBP19.46■□□□□ 0.71
CIRBP-238ENST00000592412 COCHO43405 550 aa19.45■□□□□ 0.7
CIRBP-238ENST00000592412 APODP05090 189 aa19.45■□□□□ 0.7
CIRBP-238ENST00000592412 MBL2P11226 248 aaPredicted RBP19.45■□□□□ 0.7
CIRBP-238ENST00000592412 ENGP17813 658 aa19.45■□□□□ 0.7
CIRBP-238ENST00000592412 IFRD2Q12894 506 aaPredicted RBP19.45■□□□□ 0.7
CIRBP-238ENST00000592412 TDRD10Q5VZ19 366 aaKnown RBP19.45■□□□□ 0.7
CIRBP-238ENST00000592412 PIP4P1Q86T03 277 aa19.45■□□□□ 0.7
CIRBP-238ENST00000592412 SYT12Q8IV01 421 aa19.45■□□□□ 0.7
CIRBP-238ENST00000592412 CCDC65Q8IXS2 484 aa19.45■□□□□ 0.7
CIRBP-238ENST00000592412 OR6B3Q8NGW1 331 aa19.45■□□□□ 0.7
CIRBP-238ENST00000592412 HMGB4Q8WW32 186 aa19.45■□□□□ 0.7
CIRBP-238ENST00000592412 ZNF516Q92618 1163 aa19.45■□□□□ 0.7
CIRBP-238ENST00000592412 SNX25Q9H3E2 840 aa19.45■□□□□ 0.7
CIRBP-238ENST00000592412 FSCN3Q9NQT6 498 aa19.45■□□□□ 0.7
CIRBP-238ENST00000592412 PI4KAP42356 2102 aa19.45■□□□□ 0.7
CIRBP-238ENST00000592412 MYO18AQ92614 2054 aaKnown RBP19.44■□□□□ 0.7
CIRBP-238ENST00000592412 TCRBV21S2A2A0A5A6 115 aa19.44■□□□□ 0.7
CIRBP-238ENST00000592412 PCNX2A6NKB5 2137 aa19.44■□□□□ 0.7
CIRBP-238ENST00000592412 ADH1CP00326 375 aa19.44■□□□□ 0.7
CIRBP-238ENST00000592412 DLATP10515 647 aaKnown RBP19.44■□□□□ 0.7
CIRBP-238ENST00000592412 HOXB3P14651 431 aaPredicted RBP19.44■□□□□ 0.7
CIRBP-238ENST00000592412 ITPKAP23677 461 aa19.44■□□□□ 0.7
CIRBP-238ENST00000592412 TNFRSF4P43489 277 aa19.44■□□□□ 0.7
CIRBP-238ENST00000592412 MAPK8P45983 427 aa19.44■□□□□ 0.7
CIRBP-238ENST00000592412 LMAN2Q12907 356 aa19.44■□□□□ 0.7
CIRBP-238ENST00000592412 SLC39A14Q15043 492 aa19.44■□□□□ 0.7
CIRBP-238ENST00000592412 E2F4Q16254 413 aa19.44■□□□□ 0.7
CIRBP-238ENST00000592412 SNRNP35Q16560 246 aaKnown RBP19.44■□□□□ 0.7
CIRBP-238ENST00000592412 EOGTQ5NDL2 527 aa19.44■□□□□ 0.7
CIRBP-238ENST00000592412 KIAA1211LQ6NV74 962 aa19.44■□□□□ 0.7
CIRBP-238ENST00000592412 SLC23A3Q6PIS1 610 aa19.44■□□□□ 0.7
CIRBP-238ENST00000592412 RDH13Q8NBN7 331 aa19.44■□□□□ 0.7
CIRBP-238ENST00000592412 SPACA7Q96KW9 195 aa19.44■□□□□ 0.7
CIRBP-238ENST00000592412 SLITRK1Q96PX8 696 aa19.44■□□□□ 0.7
CIRBP-238ENST00000592412 KCNK16Q96T55 309 aa19.44■□□□□ 0.7
CIRBP-238ENST00000592412 CGRRF1Q99675 332 aa19.44■□□□□ 0.7
CIRBP-238ENST00000592412 TRIM9Q9C026 710 aa19.44■□□□□ 0.7
CIRBP-238ENST00000592412 ELOVL4Q9GZR5 314 aa19.44■□□□□ 0.7
CIRBP-238ENST00000592412 XYLT2Q9H1B5 865 aa19.44■□□□□ 0.7
CIRBP-238ENST00000592412 POLMQ9NP87 494 aaPredicted RBP19.44■□□□□ 0.7
CIRBP-238ENST00000592412 AGPAT3Q9NRZ7 376 aa19.44■□□□□ 0.7
CIRBP-238ENST00000592412 PILRBQ9UKJ0 227 aa19.44■□□□□ 0.7
CIRBP-238ENST00000592412 CIZ1Q9ULV3 898 aaPredicted RBP19.44■□□□□ 0.7
CIRBP-238ENST00000592412 SMG1Q96Q15 3661 aaKnown RBP19.44■□□□□ 0.7
CIRBP-238ENST00000592412 PCDH15Q96QU1 1955 aa19.44■□□□□ 0.7
CIRBP-238ENST00000592412 E2F8A0AVK6 867 aa19.43■□□□□ 0.7
CIRBP-238ENST00000592412 TRIM24O15164 1050 aa19.43■□□□□ 0.7
CIRBP-238ENST00000592412 FAM163BP0C2L3 166 aa19.43■□□□□ 0.7
CIRBP-238ENST00000592412 SYT1P21579 422 aa19.43■□□□□ 0.7
CIRBP-238ENST00000592412 CYP24A1Q07973 514 aa19.43■□□□□ 0.7
CIRBP-238ENST00000592412 PSMD6Q15008 389 aa19.43■□□□□ 0.7
CIRBP-238ENST00000592412 WDR72Q3MJ13 1102 aa19.43■□□□□ 0.7
CIRBP-238ENST00000592412 SPDYCQ5MJ68 293 aa19.43■□□□□ 0.7
CIRBP-238ENST00000592412 LYSMD4Q5XG99 296 aa19.43■□□□□ 0.7
CIRBP-238ENST00000592412 PAQR9Q6ZVX9 377 aa19.43■□□□□ 0.7
CIRBP-238ENST00000592412 DDX42Q86XP3 938 aaKnown RBP eCLIP19.43■□□□□ 0.72e-6■■■□□ 17.9
CIRBP-238ENST00000592412 MIB1Q86YT6 1006 aa19.43■□□□□ 0.7
CIRBP-238ENST00000592412 NUP93Q8N1F7 819 aa19.43■□□□□ 0.7
CIRBP-238ENST00000592412 NAT16Q8N8M0 369 aa19.43■□□□□ 0.7
CIRBP-238ENST00000592412 B3GALNT2Q8NCR0 500 aa19.43■□□□□ 0.7
CIRBP-238ENST00000592412 SCAMP5Q8TAC9 235 aa19.43■□□□□ 0.7
CIRBP-238ENST00000592412 ZNF507Q8TCN5 953 aa19.43■□□□□ 0.7
CIRBP-238ENST00000592412 NUSAP1Q9BXS6 441 aaKnown RBP19.43■□□□□ 0.7
CIRBP-238ENST00000592412 CCSER2Q9H7U1 834 aa19.43■□□□□ 0.7
CIRBP-238ENST00000592412 CD248Q9HCU0 757 aa19.43■□□□□ 0.7
CIRBP-238ENST00000592412 KBTBD4Q9NVX7 518 aa19.43■□□□□ 0.7
CIRBP-238ENST00000592412 BCCIPQ9P287 314 aaKnown RBP eCLIP19.43■□□□□ 0.7
CIRBP-238ENST00000592412 CELSR3Q9NYQ7 3312 aa19.43■□□□□ 0.7
CIRBP-238ENST00000592412 LOC400499M0QZD8 3231 aa19.43■□□□□ 0.7
CIRBP-238ENST00000592412 EIF3DO15371 548 aaKnown RBP eCLIP19.42■□□□□ 0.7
CIRBP-238ENST00000592412 MAP3K13O43283 966 aa19.42■□□□□ 0.7
CIRBP-238ENST00000592412 HYAL3O43820 417 aaPredicted RBP19.42■□□□□ 0.7
CIRBP-238ENST00000592412 TULP3O75386 442 aa19.42■□□□□ 0.7
CIRBP-238ENST00000592412 STAU1O95793 577 aaKnown RBP19.42■□□□□ 0.7
CIRBP-238ENST00000592412 GABRG2P18507 467 aa19.42■□□□□ 0.7
CIRBP-238ENST00000592412 TNNI1P19237 187 aa19.42■□□□□ 0.7
CIRBP-238ENST00000592412 YWHAQP27348 245 aa19.42■□□□□ 0.7
CIRBP-238ENST00000592412 PGFP49763 221 aa19.42■□□□□ 0.7
CIRBP-238ENST00000592412 MYL6P60660 151 aa19.42■□□□□ 0.7
CIRBP-238ENST00000592412 SEMA3BQ13214 749 aa19.42■□□□□ 0.7
CIRBP-238ENST00000592412 SNX30Q5VWJ9 437 aa19.42■□□□□ 0.7
CIRBP-238ENST00000592412 BBS7Q8IWZ6 715 aa19.42■□□□□ 0.7
CIRBP-238ENST00000592412 OVCA2Q8WZ82 227 aa19.42■□□□□ 0.7
CIRBP-238ENST00000592412 FBXO32Q969P5 355 aa19.42■□□□□ 0.7
CIRBP-238ENST00000592412 CCDC127Q96BQ5 260 aa19.42■□□□□ 0.7
CIRBP-238ENST00000592412 TNMDQ9H2S6 317 aa19.42■□□□□ 0.7
CIRBP-238ENST00000592412 KIAA1586Q9HCI6 787 aa19.42■□□□□ 0.7
CIRBP-238ENST00000592412 IL37Q9NZH6 218 aa19.42■□□□□ 0.7
CIRBP-238ENST00000592412 TBC1D14Q9P2M4 693 aa19.42■□□□□ 0.7
CIRBP-238ENST00000592412 CHORDC1Q9UHD1 332 aaPredicted RBP19.42■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms