RNA–Protein interactions for RNA: ENST00000592060.5

MBD1-227, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best)

Gene MBD1, Length 1,952 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-227ENST00000592060 SDC4P31431 198 aa16.46■□□□□ 0.22
MBD1-227ENST00000592060 IFNAR2P48551 515 aa16.46■□□□□ 0.22
MBD1-227ENST00000592060 CRYBB1P53674 252 aaPredicted RBP16.46■□□□□ 0.22
MBD1-227ENST00000592060 ATP11AP98196 1134 aa16.46■□□□□ 0.22
MBD1-227ENST00000592060 BST2Q10589 180 aaKnown RBP16.46■□□□□ 0.22
MBD1-227ENST00000592060 IFT88Q13099 833 aa16.46■□□□□ 0.22
MBD1-227ENST00000592060 MPP2Q14168 576 aa16.46■□□□□ 0.22
MBD1-227ENST00000592060 PDK2Q15119 407 aa16.46■□□□□ 0.22
MBD1-227ENST00000592060 HP1BP3Q5SSJ5 553 aaPredicted RBP16.46■□□□□ 0.22
MBD1-227ENST00000592060 VSIG1Q86XK7 387 aa16.46■□□□□ 0.22
MBD1-227ENST00000592060 CCDC13Q8IYE1 715 aa16.46■□□□□ 0.22
MBD1-227ENST00000592060 FAM71DQ8N9W8 422 aa16.46■□□□□ 0.22
MBD1-227ENST00000592060 WDR83Q9BRX9 315 aaKnown RBP16.46■□□□□ 0.22
MBD1-227ENST00000592060 C11orf84Q9BUA3 381 aaPredicted RBP16.46■□□□□ 0.22
MBD1-227ENST00000592060 SNRNP25Q9BV90 132 aaKnown RBP16.46■□□□□ 0.22
MBD1-227ENST00000592060 GPATCH2LQ9NWQ4 482 aa16.46■□□□□ 0.22
MBD1-227ENST00000592060 TBK1Q9UHD2 729 aa16.46■□□□□ 0.22
MBD1-227ENST00000592060 ZMYND8Q9ULU4 1186 aaPredicted RBP16.46■□□□□ 0.22
MBD1-227ENST00000592060 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP16.45■□□□□ 0.22
MBD1-227ENST00000592060 TCRBV7S3A2A0A539 114 aa16.45■□□□□ 0.22
MBD1-227ENST00000592060 KPNA7A9QM74 516 aa16.45■□□□□ 0.22
MBD1-227ENST00000592060 GOLGA8MH3BSY2 632 aa16.45■□□□□ 0.22
MBD1-227ENST00000592060 CPP00450 1065 aa16.45■□□□□ 0.22
MBD1-227ENST00000592060 SCNN1AP37088 669 aa16.45■□□□□ 0.22
MBD1-227ENST00000592060 BCAT1P54687 386 aa16.45■□□□□ 0.22
MBD1-227ENST00000592060 HUNKP57058 714 aa16.45■□□□□ 0.22
MBD1-227ENST00000592060 SNX16P57768 344 aa16.45■□□□□ 0.22
MBD1-227ENST00000592060 GPX6P59796 221 aa16.45■□□□□ 0.22
MBD1-227ENST00000592060 ROR1Q01973 937 aa16.45■□□□□ 0.22
MBD1-227ENST00000592060 TMED2Q15363 201 aa16.45■□□□□ 0.22
MBD1-227ENST00000592060 TAF1CQ15572 869 aaPredicted RBP16.45■□□□□ 0.22
MBD1-227ENST00000592060 MSS51Q4VC12 460 aa16.45■□□□□ 0.22
MBD1-227ENST00000592060 BOLA3Q53S33 107 aa16.45■□□□□ 0.22
MBD1-227ENST00000592060 ZC3H12AQ5D1E8 599 aaKnown RBP16.45■□□□□ 0.22
MBD1-227ENST00000592060 FNBP1LQ5T0N5 605 aa16.45■□□□□ 0.22
MBD1-227ENST00000592060 PIGWQ7Z7B1 504 aa16.45■□□□□ 0.22
MBD1-227ENST00000592060 SCUBE3Q8IX30 993 aa16.45■□□□□ 0.22
MBD1-227ENST00000592060 OTUD6BQ8N6M0 293 aa16.45■□□□□ 0.22
MBD1-227ENST00000592060 PQLC3Q8N755 202 aa16.45■□□□□ 0.22
MBD1-227ENST00000592060 ANKRD52Q8NB46 1076 aa16.45■□□□□ 0.22
MBD1-227ENST00000592060 SMG8Q8ND04 991 aaKnown RBP16.45■□□□□ 0.22
MBD1-227ENST00000592060 TBCBQ99426 244 aa16.45■□□□□ 0.22
MBD1-227ENST00000592060 MAK16Q9BXY0 300 aaKnown RBP16.45■□□□□ 0.22
MBD1-227ENST00000592060 B3GNT5Q9BYG0 378 aa16.45■□□□□ 0.22
MBD1-227ENST00000592060 PCDH18Q9HCL0 1135 aa16.45■□□□□ 0.22
MBD1-227ENST00000592060 NGRNQ9NPE2 291 aaKnown RBP16.45■□□□□ 0.22
MBD1-227ENST00000592060 UBN1Q9NPG3 1134 aa16.45■□□□□ 0.22
MBD1-227ENST00000592060 C17orf102A2RUQ5 167 aa16.44■□□□□ 0.22
MBD1-227ENST00000592060 SMAPO00193 183 aa16.44■□□□□ 0.22
MBD1-227ENST00000592060 MDM4O15151 490 aa16.44■□□□□ 0.22
MBD1-227ENST00000592060 XPOTO43592 962 aaKnown RBP16.44■□□□□ 0.22
MBD1-227ENST00000592060 LMO2P25791 158 aa16.44■□□□□ 0.22
MBD1-227ENST00000592060 PNPLA4P41247 253 aa16.44■□□□□ 0.22
MBD1-227ENST00000592060 PTPN9P43378 593 aa16.44■□□□□ 0.22
MBD1-227ENST00000592060 HDAC4P56524 1084 aa16.44■□□□□ 0.22
MBD1-227ENST00000592060 ARL4CP56559 192 aa16.44■□□□□ 0.22
MBD1-227ENST00000592060 KRT81Q14533 505 aa16.44■□□□□ 0.22
MBD1-227ENST00000592060 LRRC14Q15048 493 aa16.44■□□□□ 0.22
MBD1-227ENST00000592060 CA9Q16790 459 aa16.44■□□□□ 0.22
MBD1-227ENST00000592060 C17orf99Q6UX52 265 aa16.44■□□□□ 0.22
MBD1-227ENST00000592060 SLC26A9Q7LBE3 791 aa16.44■□□□□ 0.22
MBD1-227ENST00000592060 SRRM1Q8IYB3 904 aaKnown RBP16.44■□□□□ 0.22
MBD1-227ENST00000592060 ARRDC4Q8NCT1 418 aa16.44■□□□□ 0.22
MBD1-227ENST00000592060 CLEC4CQ8WTT0 213 aa16.44■□□□□ 0.22
MBD1-227ENST00000592060 PPM1EQ8WY54 764 aa16.44■□□□□ 0.22
MBD1-227ENST00000592060 FAF2Q96CS3 445 aa16.44■□□□□ 0.22
MBD1-227ENST00000592060 KATNAL1Q9BW62 490 aa16.44■□□□□ 0.22
MBD1-227ENST00000592060 AP5M1Q9H0R1 490 aa16.44■□□□□ 0.22
MBD1-227ENST00000592060 VPS37BQ9H9H4 285 aa16.44■□□□□ 0.22
MBD1-227ENST00000592060 GOLGA2P5Q9HBQ8 144 aa16.44■□□□□ 0.22
MBD1-227ENST00000592060 CYLDQ9NQC7 956 aa16.44■□□□□ 0.22
MBD1-227ENST00000592060 IPPQ9Y573 584 aa16.44■□□□□ 0.22
MBD1-227ENST00000592060 ZNF487B1APH4 448 aa16.44■□□□□ 0.22
MBD1-227ENST00000592060 TFE3P19532 575 aaPredicted RBP16.44■□□□□ 0.22
MBD1-227ENST00000592060 CYP2B6P20813 491 aa16.44■□□□□ 0.22
MBD1-227ENST00000592060 ADORA2BP29275 332 aa16.44■□□□□ 0.22
MBD1-227ENST00000592060 GNL1P36915 607 aaPredicted RBP16.44■□□□□ 0.22
MBD1-227ENST00000592060 TAF6P49848 677 aa16.44■□□□□ 0.22
MBD1-227ENST00000592060 LIG3P49916 1009 aa16.44■□□□□ 0.22
MBD1-227ENST00000592060 NRLP54845 237 aa16.44■□□□□ 0.22
MBD1-227ENST00000592060 RASA2Q15283 850 aa16.44■□□□□ 0.22
MBD1-227ENST00000592060 ZNF618Q5T7W0 954 aa16.44■□□□□ 0.22
MBD1-227ENST00000592060 SLC9A4Q6AI14 798 aa16.44■□□□□ 0.22
MBD1-227ENST00000592060 ARCQ7LC44 396 aa16.44■□□□□ 0.22
MBD1-227ENST00000592060 TRABD2AQ86V40 505 aa16.44■□□□□ 0.22
MBD1-227ENST00000592060 ANKMY2Q8IV38 441 aa16.44■□□□□ 0.22
MBD1-227ENST00000592060 MAP7D3Q8IWC1 876 aa16.44■□□□□ 0.22
MBD1-227ENST00000592060 PLD5Q8N7P1 536 aa16.44■□□□□ 0.22
MBD1-227ENST00000592060 MGARPQ8TDB4 240 aa16.44■□□□□ 0.22
MBD1-227ENST00000592060 P3H4Q92791 437 aa16.44■□□□□ 0.22
MBD1-227ENST00000592060 APBA2Q99767 749 aa16.44■□□□□ 0.22
MBD1-227ENST00000592060 NCAPGQ9BPX3 1015 aa16.44■□□□□ 0.22
MBD1-227ENST00000592060 ADAM33Q9BZ11 813 aa16.44■□□□□ 0.22
MBD1-227ENST00000592060 PPCSQ9HAB8 311 aa16.44■□□□□ 0.22
MBD1-227ENST00000592060 MANSC4A6NHS7 340 aaPredicted RBP16.43■□□□□ 0.22
MBD1-227ENST00000592060 PDGFRBP09619 1106 aa16.43■□□□□ 0.22
MBD1-227ENST00000592060 TGM2P21980 687 aa16.43■□□□□ 0.22
MBD1-227ENST00000592060 STIP1P31948 543 aaKnown RBP16.43■□□□□ 0.22
MBD1-227ENST00000592060 RDXP35241 583 aaKnown RBP16.43■□□□□ 0.22
MBD1-227ENST00000592060 RGS2P41220 211 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms