RNA–Protein interactions for RNA: ENST00000591383.1

VPS4B-205, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

TSL 5

Gene VPS4B, Length 701 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-205ENST00000591383 APOBEC3GQ9HC16 384 aaKnown RBP6.83□□□□□ -1.32
VPS4B-205ENST00000591383 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP6.83□□□□□ -1.32
VPS4B-205ENST00000591383 RAB20Q9NX57 234 aa6.83□□□□□ -1.32
VPS4B-205ENST00000591383 MTRRQ9UBK8 725 aa6.83□□□□□ -1.32
VPS4B-205ENST00000591383 DSEQ9UL01 958 aa6.83□□□□□ -1.32
VPS4B-205ENST00000591383 SSX2IPQ9Y2D8 614 aa6.83□□□□□ -1.32
VPS4B-205ENST00000591383 MTCH2Q9Y6C9 303 aa6.83□□□□□ -1.32
VPS4B-205ENST00000591383 CDY1Q9Y6F8 540 aa6.83□□□□□ -1.32
VPS4B-205ENST00000591383 MYO16Q9Y6X6 1858 aa6.83□□□□□ -1.32
VPS4B-205ENST00000591383 MYH10P35580 1976 aa6.82□□□□□ -1.32
VPS4B-205ENST00000591383 OR6C75A6NL08 312 aa6.82□□□□□ -1.32
VPS4B-205ENST00000591383 J3QW42 95 aa6.82□□□□□ -1.32
VPS4B-205ENST00000591383 LINC01565O15544 149 aa6.82□□□□□ -1.32
VPS4B-205ENST00000591383 ADAM12O43184 909 aa6.82□□□□□ -1.32
VPS4B-205ENST00000591383 LRRN2O75325 713 aa6.82□□□□□ -1.32
VPS4B-205ENST00000591383 CAVIN2O95810 425 aa6.82□□□□□ -1.32
VPS4B-205ENST00000591383 SERPINC1P01008 464 aa6.82□□□□□ -1.32
VPS4B-205ENST00000591383 CST3P01034 146 aaPredicted RBP6.82□□□□□ -1.32
VPS4B-205ENST00000591383 SRGAP2BP0DMP2 458 aa6.82□□□□□ -1.32
VPS4B-205ENST00000591383 EPCAMP16422 314 aa6.82□□□□□ -1.32
VPS4B-205ENST00000591383 ZNF18P17022 549 aa6.82□□□□□ -1.32
VPS4B-205ENST00000591383 CD33P20138 364 aa6.82□□□□□ -1.32
VPS4B-205ENST00000591383 PAX3P23760 479 aa6.82□□□□□ -1.32
VPS4B-205ENST00000591383 OR1D2P34982 312 aa6.82□□□□□ -1.32
VPS4B-205ENST00000591383 RBM10P98175 930 aaKnown RBP6.82□□□□□ -1.32
VPS4B-205ENST00000591383 ROR1Q01973 937 aa6.82□□□□□ -1.32
VPS4B-205ENST00000591383 APBA1Q02410 837 aa6.82□□□□□ -1.32
VPS4B-205ENST00000591383 PTSQ03393 145 aa6.82□□□□□ -1.32
VPS4B-205ENST00000591383 HYAL1Q12794 435 aa6.82□□□□□ -1.32
VPS4B-205ENST00000591383 IQCB1Q15051 598 aa6.82□□□□□ -1.32
VPS4B-205ENST00000591383 CLUL1Q15846 466 aa6.82□□□□□ -1.32
VPS4B-205ENST00000591383 DUSP6Q16828 381 aa6.82□□□□□ -1.32
VPS4B-205ENST00000591383 EXOC3L4Q17RC7 722 aa6.82□□□□□ -1.32
VPS4B-205ENST00000591383 CCDC142Q17RM4 750 aa6.82□□□□□ -1.32
VPS4B-205ENST00000591383 SGSM1Q2NKQ1 1148 aa6.82□□□□□ -1.32
VPS4B-205ENST00000591383 SLC39A12Q504Y0 691 aa6.82□□□□□ -1.32
VPS4B-205ENST00000591383 MIIPQ5JXC2 388 aa6.82□□□□□ -1.32
VPS4B-205ENST00000591383 LIN9Q5TKA1 542 aa6.82□□□□□ -1.32
VPS4B-205ENST00000591383 TRIM65Q6PJ69 517 aa6.82□□□□□ -1.32
VPS4B-205ENST00000591383 BNC2Q6ZN30 1099 aaPredicted RBP6.82□□□□□ -1.32
VPS4B-205ENST00000591383 CCDC81Q6ZN84 652 aa6.82□□□□□ -1.32
VPS4B-205ENST00000591383 OSTM1Q86WC4 334 aa6.82□□□□□ -1.32
VPS4B-205ENST00000591383 PALB2Q86YC2 1186 aa6.82□□□□□ -1.32
VPS4B-205ENST00000591383 ARHGEF19Q8IW93 802 aa6.82□□□□□ -1.32
VPS4B-205ENST00000591383 THEM5Q8N1Q8 247 aa6.82□□□□□ -1.32
VPS4B-205ENST00000591383 MRPL43Q8N983 215 aaKnown RBP6.82□□□□□ -1.32
VPS4B-205ENST00000591383 OR6B3Q8NGW1 331 aa6.82□□□□□ -1.32
VPS4B-205ENST00000591383 OR10T2Q8NGX3 314 aa6.82□□□□□ -1.32
VPS4B-205ENST00000591383 MAFAQ8NHW3 353 aaPredicted RBP6.82□□□□□ -1.32
VPS4B-205ENST00000591383 FBXO27Q8NI29 283 aa6.82□□□□□ -1.32
VPS4B-205ENST00000591383 KBTBD7Q8WVZ9 684 aa6.82□□□□□ -1.32
VPS4B-205ENST00000591383 TAF4BQ92750 862 aa6.82□□□□□ -1.32
VPS4B-205ENST00000591383 ABHD17AQ96GS6 310 aa6.82□□□□□ -1.32
VPS4B-205ENST00000591383 PGLYRP2Q96PD5 576 aa6.82□□□□□ -1.32
VPS4B-205ENST00000591383 TMEM209Q96SK2 561 aa6.82□□□□□ -1.32
VPS4B-205ENST00000591383 SYT15Q9BQS2 421 aa6.82□□□□□ -1.32
VPS4B-205ENST00000591383 MRPL45Q9BRJ2 306 aaKnown RBP6.82□□□□□ -1.32
VPS4B-205ENST00000591383 LRRC3Q9BY71 257 aa6.82□□□□□ -1.32
VPS4B-205ENST00000591383 SDCBP2Q9H190 292 aa6.82□□□□□ -1.32
VPS4B-205ENST00000591383 RASSF4Q9H2L5 321 aa6.82□□□□□ -1.32
VPS4B-205ENST00000591383 NDST4Q9H3R1 872 aa6.82□□□□□ -1.32
VPS4B-205ENST00000591383 MAN1C1Q9NR34 630 aa6.82□□□□□ -1.32
VPS4B-205ENST00000591383 CHST7Q9NS84 486 aa6.82□□□□□ -1.32
VPS4B-205ENST00000591383 GDAP2Q9NXN4 497 aa6.82□□□□□ -1.32
VPS4B-205ENST00000591383 DDX43Q9NXZ2 648 aaKnown RBP6.82□□□□□ -1.32
VPS4B-205ENST00000591383 CLDND1Q9NY35 253 aa6.82□□□□□ -1.32
VPS4B-205ENST00000591383 HMGXB4Q9UGU5 601 aa6.82□□□□□ -1.32
VPS4B-205ENST00000591383 GPN3Q9UHW5 284 aaPredicted RBP6.82□□□□□ -1.32
VPS4B-205ENST00000591383 FBXL5Q9UKA1 691 aa6.82□□□□□ -1.32
VPS4B-205ENST00000591383 BARX2Q9UMQ3 279 aaPredicted RBP6.82□□□□□ -1.32
VPS4B-205ENST00000591383 PPT2Q9UMR5 302 aa6.82□□□□□ -1.32
VPS4B-205ENST00000591383 PCDHB5Q9Y5E4 795 aa6.82□□□□□ -1.32
VPS4B-205ENST00000591383 PATJQ8NI35 1801 aa6.82□□□□□ -1.32
VPS4B-205ENST00000591383 PTPRDP23468 1912 aa6.82□□□□□ -1.32
VPS4B-205ENST00000591383 COL6A3P12111 3177 aa6.81□□□□□ -1.32
VPS4B-205ENST00000591383 C2orf16Q68DN1 1984 aa6.81□□□□□ -1.32
VPS4B-205ENST00000591383 FSD2A1L4K1 749 aa6.81□□□□□ -1.32
VPS4B-205ENST00000591383 WDR27A2RRH5 827 aa6.81□□□□□ -1.32
VPS4B-205ENST00000591383 SOBPA7XYQ1 873 aa6.81□□□□□ -1.32
VPS4B-205ENST00000591383 A8MXQ7 604 aa6.81□□□□□ -1.32
VPS4B-205ENST00000591383 PRRG1O14668 218 aa6.81□□□□□ -1.32
VPS4B-205ENST00000591383 P4HA2O15460 535 aa6.81□□□□□ -1.32
VPS4B-205ENST00000591383 CLASP2O75122 1294 aaKnown RBP6.81□□□□□ -1.32
VPS4B-205ENST00000591383 EFEMP2O95967 443 aa6.81□□□□□ -1.32
VPS4B-205ENST00000591383 CYP11A1P05108 521 aa6.81□□□□□ -1.32
VPS4B-205ENST00000591383 PDGFRBP09619 1106 aa6.81□□□□□ -1.32
VPS4B-205ENST00000591383 WEE2P0C1S8 567 aa6.81□□□□□ -1.32
VPS4B-205ENST00000591383 SPATA31D3P0C874 917 aa6.81□□□□□ -1.32
VPS4B-205ENST00000591383 KRT5P13647 590 aa6.81□□□□□ -1.32
VPS4B-205ENST00000591383 TRIM21P19474 475 aaKnown RBP6.81□□□□□ -1.32
VPS4B-205ENST00000591383 WARSP23381 471 aaKnown RBP6.81□□□□□ -1.32
VPS4B-205ENST00000591383 TBXAS1P24557 533 aaPredicted RBP6.81□□□□□ -1.32
VPS4B-205ENST00000591383 PCSK1P29120 753 aa6.81□□□□□ -1.32
VPS4B-205ENST00000591383 KLK7P49862 253 aa6.81□□□□□ -1.32
VPS4B-205ENST00000591383 CDH8P55286 799 aa6.81□□□□□ -1.32
VPS4B-205ENST00000591383 YWHAEP62258 255 aaKnown RBP6.81□□□□□ -1.32
VPS4B-205ENST00000591383 GPLD1P80108 840 aa6.81□□□□□ -1.32
VPS4B-205ENST00000591383 ATP11AP98196 1134 aa6.81□□□□□ -1.32
VPS4B-205ENST00000591383 UBXN1Q04323 297 aa6.81□□□□□ -1.32
VPS4B-205ENST00000591383 CUL2Q13617 745 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms