RNA–Protein interactions for RNA: ENST00000591315.5

VMP1-211, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 800 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-211ENST00000591315 NUDT5Q9UKK9 219 aa12.17□□□□□ -0.46
VMP1-211ENST00000591315 MTF2Q9Y483 593 aaPredicted RBP12.17□□□□□ -0.46
VMP1-211ENST00000591315 HELZP42694 1942 aaKnown RBP12.17□□□□□ -0.46
VMP1-211ENST00000591315 KMT2EQ8IZD2 1858 aa12.17□□□□□ -0.46
VMP1-211ENST00000591315 A0A1W2PQH9 124 aa12.16□□□□□ -0.46
VMP1-211ENST00000591315 FAM92AA1XBS5 289 aa12.16□□□□□ -0.46
VMP1-211ENST00000591315 GTPBP10A4D1E9 387 aaKnown RBP12.16□□□□□ -0.46
VMP1-211ENST00000591315 PIK3R2O00459 728 aa12.16□□□□□ -0.46
VMP1-211ENST00000591315 DPYSL4O14531 572 aa12.16□□□□□ -0.46
VMP1-211ENST00000591315 ZNF263O14978 683 aa12.16□□□□□ -0.46
VMP1-211ENST00000591315 MDM4O15151 490 aa12.16□□□□□ -0.46
VMP1-211ENST00000591315 OAS1P00973 400 aaKnown RBP12.16□□□□□ -0.46
VMP1-211ENST00000591315 ZDHHC11BP0C7U3 371 aa12.16□□□□□ -0.46
VMP1-211ENST00000591315 ARSAP15289 507 aa12.16□□□□□ -0.46
VMP1-211ENST00000591315 ZNF18P17022 549 aa12.16□□□□□ -0.46
VMP1-211ENST00000591315 DDX6P26196 483 aaKnown RBP eCLIP12.16□□□□□ -0.46
VMP1-211ENST00000591315 EEF1GP26641 437 aaKnown RBP12.16□□□□□ -0.46
VMP1-211ENST00000591315 WEE1P30291 646 aa12.16□□□□□ -0.46
VMP1-211ENST00000591315 USP8P40818 1118 aa12.16□□□□□ -0.46
VMP1-211ENST00000591315 RGS7P49802 495 aa12.16□□□□□ -0.46
VMP1-211ENST00000591315 COPB1P53618 953 aaKnown RBP12.16□□□□□ -0.46
VMP1-211ENST00000591315 FCHO2Q0JRZ9 810 aa12.16□□□□□ -0.46
VMP1-211ENST00000591315 MLF2Q15773 248 aaPredicted RBP12.16□□□□□ -0.46
VMP1-211ENST00000591315 PKDCCQ504Y2 493 aa12.16□□□□□ -0.46
VMP1-211ENST00000591315 DENND1BQ6P3S1 775 aa12.16□□□□□ -0.46
VMP1-211ENST00000591315 SCD5Q86SK9 330 aa12.16□□□□□ -0.46
VMP1-211ENST00000591315 CELF5Q8N6W0 485 aaKnown RBP12.16□□□□□ -0.46
VMP1-211ENST00000591315 BPIFB1Q8TDL5 484 aa12.16□□□□□ -0.46
VMP1-211ENST00000591315 SH3RF2Q8TEC5 729 aa12.16□□□□□ -0.46
VMP1-211ENST00000591315 DEPDC1BQ8WUY9 529 aa12.16□□□□□ -0.46
VMP1-211ENST00000591315 SLITRK1Q96PX8 696 aa12.16□□□□□ -0.46
VMP1-211ENST00000591315 LSM14BQ9BX40 385 aaKnown RBP12.16□□□□□ -0.46
VMP1-211ENST00000591315 MFSD1Q9H3U5 465 aa12.16□□□□□ -0.46
VMP1-211ENST00000591315 TBC1D17Q9HA65 648 aa12.16□□□□□ -0.46
VMP1-211ENST00000591315 GKN1Q9NS71 199 aa12.16□□□□□ -0.46
VMP1-211ENST00000591315 GTSE1Q9NYZ3 720 aa12.16□□□□□ -0.46
VMP1-211ENST00000591315 DNAJC12Q9UKB3 198 aa12.16□□□□□ -0.46
VMP1-211ENST00000591315 CNTN6Q9UQ52 1028 aa12.16□□□□□ -0.46
VMP1-211ENST00000591315 FHOD1Q9Y613 1164 aa12.16□□□□□ -0.46
VMP1-211ENST00000591315 FAM170AA1A519 330 aa12.15□□□□□ -0.46
VMP1-211ENST00000591315 OTOL1A6NHN0 477 aaPredicted RBP12.15□□□□□ -0.46
VMP1-211ENST00000591315 FOXN3O00409 490 aaPredicted RBP12.15□□□□□ -0.46
VMP1-211ENST00000591315 STK25O00506 426 aa12.15□□□□□ -0.46
VMP1-211ENST00000591315 EPHB6O15197 1021 aa12.15□□□□□ -0.46
VMP1-211ENST00000591315 COCHO43405 550 aa12.15□□□□□ -0.46
VMP1-211ENST00000591315 PAEPP09466 180 aa12.15□□□□□ -0.46
VMP1-211ENST00000591315 USP17L7P0C7H9 530 aa12.15□□□□□ -0.46
VMP1-211ENST00000591315 COL9A1P20849 921 aa12.15□□□□□ -0.46
VMP1-211ENST00000591315 ZNF77Q15935 545 aa12.15□□□□□ -0.46
VMP1-211ENST00000591315 KLHDC7AQ5VTJ3 777 aa12.15□□□□□ -0.46
VMP1-211ENST00000591315 NAIF1Q69YI7 327 aaPredicted RBP12.15□□□□□ -0.46
VMP1-211ENST00000591315 LCLAT1Q6UWP7 414 aa12.15□□□□□ -0.46
VMP1-211ENST00000591315 TPRG1Q6ZUI0 275 aa12.15□□□□□ -0.46
VMP1-211ENST00000591315 YAF2Q8IY57 180 aa12.15□□□□□ -0.46
VMP1-211ENST00000591315 SHC3Q92529 594 aa12.15□□□□□ -0.46
VMP1-211ENST00000591315 SECISBP2LQ93073 1101 aaKnown RBP12.15□□□□□ -0.46
VMP1-211ENST00000591315 ULBP1Q9BZM6 244 aa12.15□□□□□ -0.46
VMP1-211ENST00000591315 LINC00597Q9H2U6 94 aa12.15□□□□□ -0.46
VMP1-211ENST00000591315 EBF3Q9H4W6 596 aa12.15□□□□□ -0.46
VMP1-211ENST00000591315 FAM124BQ9H5Z6 455 aaPredicted RBP12.15□□□□□ -0.46
VMP1-211ENST00000591315 HPS4Q9NQG7 708 aa12.15□□□□□ -0.46
VMP1-211ENST00000591315 LIMA1Q9UHB6 759 aaKnown RBP12.15□□□□□ -0.46
VMP1-211ENST00000591315 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.15□□□□□ -0.46
VMP1-211ENST00000591315 SCML2Q9UQR0 700 aa12.15□□□□□ -0.46
VMP1-211ENST00000591315 CPQQ9Y646 472 aa12.15□□□□□ -0.46
VMP1-211ENST00000591315 WNT6Q9Y6F9 365 aa12.15□□□□□ -0.46
VMP1-211ENST00000591315 USP3Q9Y6I4 520 aa12.15□□□□□ -0.46
VMP1-211ENST00000591315 WDR87Q6ZQQ6 2873 aa12.15□□□□□ -0.46
VMP1-211ENST00000591315 M0QYV0 167 aa12.14□□□□□ -0.47
VMP1-211ENST00000591315 LEFTY2O00292 366 aa12.14□□□□□ -0.47
VMP1-211ENST00000591315 CHADO15335 359 aa12.14□□□□□ -0.47
VMP1-211ENST00000591315 LETM1O95202 739 aaPredicted RBP12.14□□□□□ -0.47
VMP1-211ENST00000591315 OLFM2O95897 454 aa12.14□□□□□ -0.47
VMP1-211ENST00000591315 DCNP07585 359 aaKnown RBP12.14□□□□□ -0.47
VMP1-211ENST00000591315 MBL2P11226 248 aaPredicted RBP12.14□□□□□ -0.47
VMP1-211ENST00000591315 GLULP15104 373 aa12.14□□□□□ -0.47
VMP1-211ENST00000591315 TRIM21P19474 475 aaKnown RBP12.14□□□□□ -0.47
VMP1-211ENST00000591315 AVPR2P30518 371 aa12.14□□□□□ -0.47
VMP1-211ENST00000591315 TKTL1P51854 596 aa12.14□□□□□ -0.47
VMP1-211ENST00000591315 BCAT1P54687 386 aa12.14□□□□□ -0.47
VMP1-211ENST00000591315 MFAP3P55082 362 aa12.14□□□□□ -0.47
VMP1-211ENST00000591315 SLC7A9P82251 487 aa12.14□□□□□ -0.47
VMP1-211ENST00000591315 BST2Q10589 180 aaKnown RBP12.14□□□□□ -0.47
VMP1-211ENST00000591315 USP4Q13107 963 aa12.14□□□□□ -0.47
VMP1-211ENST00000591315 ZNF268Q14587 947 aaPredicted RBP12.14□□□□□ -0.47
VMP1-211ENST00000591315 MTF1Q14872 753 aa12.14□□□□□ -0.47
VMP1-211ENST00000591315 IQCB1Q15051 598 aa12.14□□□□□ -0.47
VMP1-211ENST00000591315 CNGA2Q16280 664 aa12.14□□□□□ -0.47
VMP1-211ENST00000591315 ZSCAN23Q3MJ62 389 aa12.14□□□□□ -0.47
VMP1-211ENST00000591315 HECTD3Q5T447 861 aa12.14□□□□□ -0.47
VMP1-211ENST00000591315 SNX30Q5VWJ9 437 aa12.14□□□□□ -0.47
VMP1-211ENST00000591315 ASTLQ6HA08 431 aaPredicted RBP12.14□□□□□ -0.47
VMP1-211ENST00000591315 PMF1Q6P1K2 205 aa12.14□□□□□ -0.47
VMP1-211ENST00000591315 TXNDC11Q6PKC3 985 aa12.14□□□□□ -0.47
VMP1-211ENST00000591315 BHLHA9Q7RTU4 235 aa12.14□□□□□ -0.47
VMP1-211ENST00000591315 E2F7Q96AV8 911 aa12.14□□□□□ -0.47
VMP1-211ENST00000591315 ZFRQ96KR1 1074 aaKnown RBP12.14□□□□□ -0.47
VMP1-211ENST00000591315 FAM83CQ9BQN1 747 aa12.14□□□□□ -0.47
VMP1-211ENST00000591315 FBXO44Q9H4M3 255 aa12.14□□□□□ -0.47
VMP1-211ENST00000591315 COMMD8Q9NX08 183 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms