RNA–Protein interactions for RNA: ENST00000590924.5

VAT1-208, Transcript of vesicle amine transport 1, humanhuman

TSL 3

Gene VAT1, Length 613 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-208ENST00000590924 TRPC7Q9HCX4 862 aa19.08■□□□□ 0.64
VAT1-208ENST00000590924 GCNT4Q9P109 453 aa19.08■□□□□ 0.64
VAT1-208ENST00000590924 COQ4Q9Y3A0 265 aa19.08■□□□□ 0.64
VAT1-208ENST00000590924 UTP18Q9Y5J1 556 aaKnown RBP eCLIP19.08■□□□□ 0.64
VAT1-208ENST00000590924 MYO18AQ92614 2054 aaKnown RBP19.08■□□□□ 0.64
VAT1-208ENST00000590924 TACC1O75410 805 aa19.07■□□□□ 0.64
VAT1-208ENST00000590924 FAM163BP0C2L3 166 aa19.07■□□□□ 0.64
VAT1-208ENST00000590924 TCF3P15923 654 aa19.07■□□□□ 0.64
VAT1-208ENST00000590924 BDNFP23560 247 aa19.07■□□□□ 0.64
VAT1-208ENST00000590924 GCLMP48507 274 aa19.07■□□□□ 0.64
VAT1-208ENST00000590924 ZNF445P59923 1031 aa19.07■□□□□ 0.64
VAT1-208ENST00000590924 SPEM2Q0P670 501 aa19.07■□□□□ 0.64
VAT1-208ENST00000590924 BIRC3Q13489 604 aa19.07■□□□□ 0.64
VAT1-208ENST00000590924 NCOA4Q13772 614 aa19.07■□□□□ 0.64
VAT1-208ENST00000590924 NCAPHQ15003 741 aa19.07■□□□□ 0.64
VAT1-208ENST00000590924 SGSM1Q2NKQ1 1148 aa19.07■□□□□ 0.64
VAT1-208ENST00000590924 DCAF17Q5H9S7 520 aaPredicted RBP19.07■□□□□ 0.64
VAT1-208ENST00000590924 PKN3Q6P5Z2 889 aa19.07■□□□□ 0.64
VAT1-208ENST00000590924 WDR5BQ86VZ2 330 aa19.07■□□□□ 0.64
VAT1-208ENST00000590924 CPA6Q8N4T0 437 aa19.07■□□□□ 0.64
VAT1-208ENST00000590924 OSCP1Q8WVF1 389 aa19.07■□□□□ 0.64
VAT1-208ENST00000590924 PCED1BQ96HM7 432 aa19.07■□□□□ 0.64
VAT1-208ENST00000590924 ANP32EQ9BTT0 268 aa19.07■□□□□ 0.64
VAT1-208ENST00000590924 SAMSN1Q9NSI8 373 aaKnown RBP19.07■□□□□ 0.64
VAT1-208ENST00000590924 FANCLQ9NW38 375 aa19.07■□□□□ 0.64
VAT1-208ENST00000590924 CCDC163A0A0D9SF12 145 aa19.06■□□□□ 0.64
VAT1-208ENST00000590924 ATG13O75143 517 aa19.06■□□□□ 0.64
VAT1-208ENST00000590924 VNN1O95497 513 aa19.06■□□□□ 0.64
VAT1-208ENST00000590924 PDGFRBP09619 1106 aa19.06■□□□□ 0.64
VAT1-208ENST00000590924 PFKLP17858 780 aa19.06■□□□□ 0.64
VAT1-208ENST00000590924 GJA4P35212 333 aa19.06■□□□□ 0.64
VAT1-208ENST00000590924 FMO5P49326 533 aa19.06■□□□□ 0.64
VAT1-208ENST00000590924 MXI1P50539 228 aa19.06■□□□□ 0.64
VAT1-208ENST00000590924 PDE6CP51160 858 aa19.06■□□□□ 0.64
VAT1-208ENST00000590924 CETN1Q12798 172 aa19.06■□□□□ 0.64
VAT1-208ENST00000590924 KCNH2Q12809 1159 aa19.06■□□□□ 0.64
VAT1-208ENST00000590924 SRSF5Q13243 272 aaKnown RBP19.06■□□□□ 0.64
VAT1-208ENST00000590924 IQCB1Q15051 598 aa19.06■□□□□ 0.64
VAT1-208ENST00000590924 TCP11X2Q5H9J9 407 aa19.06■□□□□ 0.64
VAT1-208ENST00000590924 DENND5BQ6ZUT9 1274 aa19.06■□□□□ 0.64
VAT1-208ENST00000590924 ARHGAP30Q7Z6I6 1101 aaPredicted RBP19.06■□□□□ 0.64
VAT1-208ENST00000590924 ARL14EPQ8N8R7 260 aaPredicted RBP19.06■□□□□ 0.64
VAT1-208ENST00000590924 FBXL13Q8NEE6 735 aa19.06■□□□□ 0.64
VAT1-208ENST00000590924 MYCBPAPQ8TBZ2 947 aa19.06■□□□□ 0.64
VAT1-208ENST00000590924 ATP2A3Q93084 1043 aa19.06■□□□□ 0.64
VAT1-208ENST00000590924 EXOC4Q96A65 974 aa19.06■□□□□ 0.64
VAT1-208ENST00000590924 FAXDC2Q96IV6 333 aa19.06■□□□□ 0.64
VAT1-208ENST00000590924 CYP2S1Q96SQ9 504 aa19.06■□□□□ 0.64
VAT1-208ENST00000590924 TTLL2Q9BWV7 592 aa19.06■□□□□ 0.64
VAT1-208ENST00000590924 ECT2Q9H8V3 914 aa19.06■□□□□ 0.64
VAT1-208ENST00000590924 DUS2Q9NX74 493 aaKnown RBP19.06■□□□□ 0.64
VAT1-208ENST00000590924 CDV3Q9UKY7 258 aaKnown RBP19.06■□□□□ 0.64
VAT1-208ENST00000590924 NME7Q9Y5B8 376 aa19.06■□□□□ 0.64
VAT1-208ENST00000590924 NCOR2Q9Y618 2525 aa19.05■□□□□ 0.64
VAT1-208ENST00000590924 C2orf78A6NCI8 922 aa19.05■□□□□ 0.64
VAT1-208ENST00000590924 KCNJ18B7U540 433 aa19.05■□□□□ 0.64
VAT1-208ENST00000590924 TRIM66O15016 1216 aa19.05■□□□□ 0.64
VAT1-208ENST00000590924 EGFP01133 1207 aa19.05■□□□□ 0.64
VAT1-208ENST00000590924 AFPP02771 609 aaKnown RBP19.05■□□□□ 0.64
VAT1-208ENST00000590924 DRD1P21728 446 aa19.05■□□□□ 0.64
VAT1-208ENST00000590924 ANXA13P27216 316 aa19.05■□□□□ 0.64
VAT1-208ENST00000590924 GRIK1P39086 918 aa19.05■□□□□ 0.64
VAT1-208ENST00000590924 MTIF2P46199 727 aaKnown RBP19.05■□□□□ 0.64
VAT1-208ENST00000590924 IFNAR2P48551 515 aa19.05■□□□□ 0.64
VAT1-208ENST00000590924 MYL6P60660 151 aa19.05■□□□□ 0.64
VAT1-208ENST00000590924 TNNC1P63316 161 aa19.05■□□□□ 0.64
VAT1-208ENST00000590924 CYP27A1Q02318 531 aa19.05■□□□□ 0.64
VAT1-208ENST00000590924 KCNJ12Q14500 433 aa19.05■□□□□ 0.64
VAT1-208ENST00000590924 MAN2A1Q16706 1144 aa19.05■□□□□ 0.64
VAT1-208ENST00000590924 DHX40Q8IX18 779 aaKnown RBP19.05■□□□□ 0.64
VAT1-208ENST00000590924 AOPEPQ8N6M6 819 aa19.05■□□□□ 0.64
VAT1-208ENST00000590924 P2RY13Q9BPV8 354 aa19.05■□□□□ 0.64
VAT1-208ENST00000590924 MRPL45Q9BRJ2 306 aaKnown RBP19.05■□□□□ 0.64
VAT1-208ENST00000590924 XYLT2Q9H1B5 865 aa19.05■□□□□ 0.64
VAT1-208ENST00000590924 SNX25Q9H3E2 840 aa19.05■□□□□ 0.64
VAT1-208ENST00000590924 EHD2Q9NZN4 543 aa19.05■□□□□ 0.64
VAT1-208ENST00000590924 ARHGAP26Q9UNA1 814 aa19.05■□□□□ 0.64
VAT1-208ENST00000590924 LRRC10BA6NIK2 292 aa19.04■□□□□ 0.64
VAT1-208ENST00000590924 BECN2A8MW95 431 aa19.04■□□□□ 0.64
VAT1-208ENST00000590924 RNF40O75150 1001 aa19.04■□□□□ 0.64
VAT1-208ENST00000590924 ASS1P00966 412 aaKnown RBP19.04■□□□□ 0.64
VAT1-208ENST00000590924 HLA-DRAP01903 254 aa19.04■□□□□ 0.64
VAT1-208ENST00000590924 ZNF18P17022 549 aa19.04■□□□□ 0.64
VAT1-208ENST00000590924 HDCP19113 662 aa19.04■□□□□ 0.64
VAT1-208ENST00000590924 HOXC13P31276 330 aa19.04■□□□□ 0.64
VAT1-208ENST00000590924 GNL1P36915 607 aaPredicted RBP19.04■□□□□ 0.64
VAT1-208ENST00000590924 GALK1P51570 392 aa19.04■□□□□ 0.64
VAT1-208ENST00000590924 ATXN1P54253 815 aaKnown RBP19.04■□□□□ 0.64
VAT1-208ENST00000590924 USP46P62068 366 aa19.04■□□□□ 0.64
VAT1-208ENST00000590924 NOP14P78316 857 aaKnown RBP19.04■□□□□ 0.64
VAT1-208ENST00000590924 EML3Q32P44 896 aa19.04■□□□□ 0.64
VAT1-208ENST00000590924 WDR72Q3MJ13 1102 aa19.04■□□□□ 0.64
VAT1-208ENST00000590924 FBXO43Q4G163 708 aa19.04■□□□□ 0.64
VAT1-208ENST00000590924 MDH1BQ5I0G3 518 aa19.04■□□□□ 0.64
VAT1-208ENST00000590924 CREBRFQ8IUR6 639 aa19.04■□□□□ 0.64
VAT1-208ENST00000590924 ANKRD20A12PQ8NF67 263 aa19.04■□□□□ 0.64
VAT1-208ENST00000590924 TAS1R2Q8TE23 839 aa19.04■□□□□ 0.64
VAT1-208ENST00000590924 SH3RF2Q8TEC5 729 aa19.04■□□□□ 0.64
VAT1-208ENST00000590924 C8orf48Q96LL4 319 aa19.04■□□□□ 0.64
VAT1-208ENST00000590924 TUBGCP2Q9BSJ2 902 aa19.04■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms