RNA–Protein interactions for RNA: ENST00000590574.5

SMARCA4-215, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 5,282 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-215ENST00000590574 ALADP13716 330 aa17.76■□□□□ 0.43
SMARCA4-215ENST00000590574 EFHC1Q5JVL4 640 aa17.76■□□□□ 0.43
SMARCA4-215ENST00000590574 METTL7BQ6UX53 244 aa17.76■□□□□ 0.43
SMARCA4-215ENST00000590574 VPS33BQ9H267 617 aa17.76■□□□□ 0.43
SMARCA4-215ENST00000590574 NOCTQ9UK39 431 aaKnown RBP17.76■□□□□ 0.43
SMARCA4-215ENST00000590574 CPSF3Q9UKF6 684 aaKnown RBP17.76■□□□□ 0.43
SMARCA4-215ENST00000590574 C3orf70A6NLC5 250 aaPredicted RBP17.75■□□□□ 0.43
SMARCA4-215ENST00000590574 CNTN2Q02246 1040 aa17.75■□□□□ 0.43
SMARCA4-215ENST00000590574 FASTKD5Q7L8L6 764 aaKnown RBP17.75■□□□□ 0.43
SMARCA4-215ENST00000590574 INPP5DQ92835 1189 aa17.75■□□□□ 0.43
SMARCA4-215ENST00000590574 KIF9Q9HAQ2 790 aa17.75■□□□□ 0.43
SMARCA4-215ENST00000590574 RPS6KL1Q9Y6S9 549 aa17.75■□□□□ 0.43
SMARCA4-215ENST00000590574 SDR42E2A6NKP2 422 aa17.75■□□□□ 0.43
SMARCA4-215ENST00000590574 APOC4-APOC2K7ER74 178 aa17.75■□□□□ 0.43
SMARCA4-215ENST00000590574 APOC2P02655 101 aa17.75■□□□□ 0.43
SMARCA4-215ENST00000590574 RFC1P35251 1148 aaPredicted RBP17.75■□□□□ 0.43
SMARCA4-215ENST00000590574 YWHAHQ04917 246 aaPredicted RBP17.75■□□□□ 0.43
SMARCA4-215ENST00000590574 LRRC38Q5VT99 294 aa17.75■□□□□ 0.43
SMARCA4-215ENST00000590574 FKBP1CQ5VVH2 108 aa17.75■□□□□ 0.43
SMARCA4-215ENST00000590574 ABTB1Q969K4 478 aaPredicted RBP17.75■□□□□ 0.43
SMARCA4-215ENST00000590574 ZDHHC18Q9NUE0 388 aa17.75■□□□□ 0.43
SMARCA4-215ENST00000590574 DCDC2Q9UHG0 476 aa17.75■□□□□ 0.43
SMARCA4-215ENST00000590574 KIAA1257Q9ULG3 409 aa17.75■□□□□ 0.43
SMARCA4-215ENST00000590574 MAGEA13PA6NCF6 341 aa17.75■□□□□ 0.43
SMARCA4-215ENST00000590574 CYP2F1P24903 491 aa17.75■□□□□ 0.43
SMARCA4-215ENST00000590574 TGFB2P61812 414 aa17.75■□□□□ 0.43
SMARCA4-215ENST00000590574 RPL10AP62906 217 aaKnown RBP17.75■□□□□ 0.43
SMARCA4-215ENST00000590574 PDK4Q16654 411 aa17.75■□□□□ 0.43
SMARCA4-215ENST00000590574 SCN4BQ8IWT1 228 aa17.75■□□□□ 0.43
SMARCA4-215ENST00000590574 CEP70Q8NHQ1 597 aa17.75■□□□□ 0.43
SMARCA4-215ENST00000590574 TSPAN16Q9UKR8 245 aa17.75■□□□□ 0.43
SMARCA4-215ENST00000590574 FZD1Q9UP38 647 aa17.75■□□□□ 0.43
SMARCA4-215ENST00000590574 HOXD13P35453 343 aa17.75■□□□□ 0.43
SMARCA4-215ENST00000590574 C16orf89Q6UX73 402 aa17.75■□□□□ 0.43
SMARCA4-215ENST00000590574 ZDHHC24Q6UX98 284 aa17.75■□□□□ 0.43
SMARCA4-215ENST00000590574 PPHLN1Q8NEY8 458 aaKnown RBP17.75■□□□□ 0.43
SMARCA4-215ENST00000590574 BSNDQ8WZ55 320 aa17.75■□□□□ 0.43
SMARCA4-215ENST00000590574 CYP3A43Q9HB55 503 aa17.75■□□□□ 0.43
SMARCA4-215ENST00000590574 AP4E1Q9UPM8 1137 aa17.75■□□□□ 0.43
SMARCA4-215ENST00000590574 KDM4FA0A1W2PPD8 638 aa17.74■□□□□ 0.43
SMARCA4-215ENST00000590574 CCNE2O96020 404 aa17.74■□□□□ 0.43
SMARCA4-215ENST00000590574 TGM2P21980 687 aa17.74■□□□□ 0.43
SMARCA4-215ENST00000590574 PAX7P23759 505 aa17.74■□□□□ 0.43
SMARCA4-215ENST00000590574 TNFSF9P41273 254 aa17.74■□□□□ 0.43
SMARCA4-215ENST00000590574 NPNTQ6UXI9 565 aa17.74■□□□□ 0.43
SMARCA4-215ENST00000590574 DRC3Q9H069 523 aa17.74■□□□□ 0.43
SMARCA4-215ENST00000590574 SLC39A10Q9ULF5 831 aa17.74■□□□□ 0.43
SMARCA4-215ENST00000590574 SLC4A7Q9Y6M7 1214 aa17.74■□□□□ 0.43
SMARCA4-215ENST00000590574 MROH7Q68CQ1 1323 aa17.74■□□□□ 0.43
SMARCA4-215ENST00000590574 hCG_1818297A0A087WSY0 165 aa17.74■□□□□ 0.43
SMARCA4-215ENST00000590574 NDST1P52848 882 aa17.74■□□□□ 0.43
SMARCA4-215ENST00000590574 CPNE8Q86YQ8 564 aa17.74■□□□□ 0.43
SMARCA4-215ENST00000590574 MYLK4Q86YV6 388 aaPredicted RBP17.74■□□□□ 0.43
SMARCA4-215ENST00000590574 TRAPPC12Q8WVT3 735 aa17.74■□□□□ 0.43
SMARCA4-215ENST00000590574 TEKT4Q8WW24 435 aa17.74■□□□□ 0.43
SMARCA4-215ENST00000590574 SAR1AQ9NR31 198 aa17.74■□□□□ 0.43
SMARCA4-215ENST00000590574 CYP39A1Q9NYL5 469 aa17.74■□□□□ 0.43
SMARCA4-215ENST00000590574 CD4P01730 458 aa17.74■□□□□ 0.43
SMARCA4-215ENST00000590574 ITGAVP06756 1048 aa17.74■□□□□ 0.43
SMARCA4-215ENST00000590574 ATICP31939 592 aa17.74■□□□□ 0.43
SMARCA4-215ENST00000590574 PTGER2P43116 358 aa17.74■□□□□ 0.43
SMARCA4-215ENST00000590574 OAZ1P54368 228 aa17.74■□□□□ 0.43
SMARCA4-215ENST00000590574 HADHBP55084 474 aaKnown RBP17.74■□□□□ 0.43
SMARCA4-215ENST00000590574 CDK16Q00536 496 aa17.74■□□□□ 0.43
SMARCA4-215ENST00000590574 POTEAQ6S8J7 498 aa17.74■□□□□ 0.43
SMARCA4-215ENST00000590574 THEM5Q8N1Q8 247 aa17.74■□□□□ 0.43
SMARCA4-215ENST00000590574 PAEPP09466 180 aa17.74■□□□□ 0.43
SMARCA4-215ENST00000590574 RPL22P35268 128 aaKnown RBP17.74■□□□□ 0.43
SMARCA4-215ENST00000590574 TMED1Q13445 227 aa17.74■□□□□ 0.43
SMARCA4-215ENST00000590574 KBTBD12Q3ZCT8 623 aa17.74■□□□□ 0.43
SMARCA4-215ENST00000590574 HABP4Q5JVS0 413 aaKnown RBP17.74■□□□□ 0.43
SMARCA4-215ENST00000590574 TRABD2AQ86V40 505 aa17.74■□□□□ 0.43
SMARCA4-215ENST00000590574 OR6P1Q8NGX9 317 aa17.74■□□□□ 0.43
SMARCA4-215ENST00000590574 ANGPTL3Q9Y5C1 460 aa17.74■□□□□ 0.43
SMARCA4-215ENST00000590574 TRPM3Q9HCF6 1732 aaPredicted RBP17.73■□□□□ 0.43
SMARCA4-215ENST00000590574 A0A087WZ62 844 aa17.73■□□□□ 0.43
SMARCA4-215ENST00000590574 A0A1W2PPM1 405 aa17.73■□□□□ 0.43
SMARCA4-215ENST00000590574 PLA2G6O60733 806 aa17.73■□□□□ 0.43
SMARCA4-215ENST00000590574 SLC45A4Q5BKX6 768 aa17.73■□□□□ 0.43
SMARCA4-215ENST00000590574 LRRC8EQ6NSJ5 796 aa17.73■□□□□ 0.43
SMARCA4-215ENST00000590574 PTPRN2Q92932 1015 aa17.73■□□□□ 0.43
SMARCA4-215ENST00000590574 ELMO2Q96JJ3 720 aa17.73■□□□□ 0.43
SMARCA4-215ENST00000590574 FDXACB1Q9BRP7 624 aaPredicted RBP17.73■□□□□ 0.43
SMARCA4-215ENST00000590574 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.73■□□□□ 0.436e-8■■■■□ 22.5
SMARCA4-215ENST00000590574 CDYLQ9Y232 598 aa17.73■□□□□ 0.43
SMARCA4-215ENST00000590574 ZNF189O75820 626 aaPredicted RBP17.73■□□□□ 0.43
SMARCA4-215ENST00000590574 EEF1B2P24534 225 aaKnown RBP17.73■□□□□ 0.43
SMARCA4-215ENST00000590574 SNX30Q5VWJ9 437 aa17.73■□□□□ 0.43
SMARCA4-215ENST00000590574 TMEM109Q9BVC6 243 aa17.73■□□□□ 0.43
SMARCA4-215ENST00000590574 MYH7P12883 1935 aa17.73■□□□□ 0.43
SMARCA4-215ENST00000590574 SIGLEC16A6NMB1 481 aa17.73■□□□□ 0.43
SMARCA4-215ENST00000590574 TBC1D12O60347 775 aa17.73■□□□□ 0.43
SMARCA4-215ENST00000590574 CHEK2O96017 543 aa17.73■□□□□ 0.43
SMARCA4-215ENST00000590574 GNAT1P11488 350 aa17.73■□□□□ 0.43
SMARCA4-215ENST00000590574 TCN1P20061 433 aaPredicted RBP17.73■□□□□ 0.43
SMARCA4-215ENST00000590574 C12orf50Q8NA57 414 aaPredicted RBP17.73■□□□□ 0.43
SMARCA4-215ENST00000590574 RNPEPL1Q9HAU8 725 aa17.73■□□□□ 0.43
SMARCA4-215ENST00000590574 COL20A1Q9P218 1284 aa17.73■□□□□ 0.43
SMARCA4-215ENST00000590574 ALS2Q96Q42 1657 aa17.73■□□□□ 0.43
SMARCA4-215ENST00000590574 GNGT2O14610 69 aa17.73■□□□□ 0.43
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