RNA–Protein interactions for RNA: ENST00000590388.5

TUBB6-208, Transcript of tubulin beta 6 class V, humanhuman

TSL 4

Gene TUBB6, Length 576 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB6-208ENST00000590388 ZNF276Q8N554 614 aa13.17□□□□□ -0.3
TUBB6-208ENST00000590388 NELL2Q99435 816 aa13.17□□□□□ -0.3
TUBB6-208ENST00000590388 TUBGCP2Q9BSJ2 902 aa13.17□□□□□ -0.3
TUBB6-208ENST00000590388 RNF38Q9H0F5 515 aa13.17□□□□□ -0.3
TUBB6-208ENST00000590388 NDST4Q9H3R1 872 aa13.17□□□□□ -0.3
TUBB6-208ENST00000590388 C8orf33Q9H7E9 229 aaPredicted RBP13.17□□□□□ -0.3
TUBB6-208ENST00000590388 LTB4R2Q9NPC1 389 aa13.17□□□□□ -0.3
TUBB6-208ENST00000590388 SAMSN1Q9NSI8 373 aaKnown RBP13.17□□□□□ -0.3
TUBB6-208ENST00000590388 GMIPQ9P107 970 aa13.17□□□□□ -0.3
TUBB6-208ENST00000590388 DLGAP2Q9P1A6 1054 aa13.17□□□□□ -0.3
TUBB6-208ENST00000590388 APEX2Q9UBZ4 518 aa13.17□□□□□ -0.3
TUBB6-208ENST00000590388 TSPAN16Q9UKR8 245 aa13.17□□□□□ -0.3
TUBB6-208ENST00000590388 PCDHB4Q9Y5E5 795 aa13.17□□□□□ -0.3
TUBB6-208ENST00000590388 PIAS3Q9Y6X2 628 aa13.17□□□□□ -0.3
TUBB6-208ENST00000590388 KCNJ18B7U540 433 aa13.16□□□□□ -0.3
TUBB6-208ENST00000590388 RNF225M0QZC1 329 aaPredicted RBP13.16□□□□□ -0.3
TUBB6-208ENST00000590388 MAN2B1O00754 1011 aa13.16□□□□□ -0.3
TUBB6-208ENST00000590388 XPO1O14980 1071 aaKnown RBP13.16□□□□□ -0.3
TUBB6-208ENST00000590388 PI15O43692 258 aa13.16□□□□□ -0.3
TUBB6-208ENST00000590388 SETSIPP0DME0 302 aa13.16□□□□□ -0.3
TUBB6-208ENST00000590388 CD19P15391 556 aa13.16□□□□□ -0.3
TUBB6-208ENST00000590388 SLC9A1P19634 815 aa13.16□□□□□ -0.3
TUBB6-208ENST00000590388 RFX1P22670 979 aa13.16□□□□□ -0.3
TUBB6-208ENST00000590388 PON1P27169 355 aa13.16□□□□□ -0.3
TUBB6-208ENST00000590388 PSEN1P49768 467 aa13.16□□□□□ -0.3
TUBB6-208ENST00000590388 SLC8A3P57103 927 aa13.16□□□□□ -0.3
TUBB6-208ENST00000590388 ZXDBP98169 803 aa13.16□□□□□ -0.3
TUBB6-208ENST00000590388 BST2Q10589 180 aaKnown RBP13.16□□□□□ -0.3
TUBB6-208ENST00000590388 KCNJ12Q14500 433 aa13.16□□□□□ -0.3
TUBB6-208ENST00000590388 PDGFRLQ15198 375 aa13.16□□□□□ -0.3
TUBB6-208ENST00000590388 MEA1Q16626 185 aa13.16□□□□□ -0.3
TUBB6-208ENST00000590388 GOLGA7BQ2TAP0 167 aa13.16□□□□□ -0.3
TUBB6-208ENST00000590388 VWA3BQ502W6 1294 aa13.16□□□□□ -0.3
TUBB6-208ENST00000590388 TCP11X2Q5H9J9 407 aa13.16□□□□□ -0.3
TUBB6-208ENST00000590388 HECTD3Q5T447 861 aa13.16□□□□□ -0.3
TUBB6-208ENST00000590388 LCLAT1Q6UWP7 414 aa13.16□□□□□ -0.3
TUBB6-208ENST00000590388 ZNF852Q6ZMS4 543 aa13.16□□□□□ -0.3
TUBB6-208ENST00000590388 C11orf57Q6ZUT1 292 aaPredicted RBP13.16□□□□□ -0.3
TUBB6-208ENST00000590388 ZNF687Q8N1G0 1237 aa13.16□□□□□ -0.3
TUBB6-208ENST00000590388 RBBP8NLQ8NC74 664 aaPredicted RBP13.16□□□□□ -0.3
TUBB6-208ENST00000590388 CSGALNACT1Q8TDX6 532 aa13.16□□□□□ -0.3
TUBB6-208ENST00000590388 SH3RF2Q8TEC5 729 aa13.16□□□□□ -0.3
TUBB6-208ENST00000590388 ZFYVE19Q96K21 471 aa13.16□□□□□ -0.3
TUBB6-208ENST00000590388 CRACR2AQ9BSW2 395 aa13.16□□□□□ -0.3
TUBB6-208ENST00000590388 FOXQ1Q9C009 403 aa13.16□□□□□ -0.3
TUBB6-208ENST00000590388 CYLDQ9NQC7 956 aa13.16□□□□□ -0.3
TUBB6-208ENST00000590388 HPS4Q9NQG7 708 aa13.16□□□□□ -0.3
TUBB6-208ENST00000590388 TLR8Q9NR97 1041 aaKnown RBP13.16□□□□□ -0.3
TUBB6-208ENST00000590388 CHORDC1Q9UHD1 332 aaPredicted RBP13.16□□□□□ -0.3
TUBB6-208ENST00000590388 RAPGEFL1Q9UHV5 662 aa13.16□□□□□ -0.3
TUBB6-208ENST00000590388 MRPS17Q9Y2R5 130 aaKnown RBP13.16□□□□□ -0.3
TUBB6-208ENST00000590388 SIT1Q9Y3P8 196 aa13.16□□□□□ -0.3
TUBB6-208ENST00000590388 CYP26A1O43174 497 aa13.15□□□□□ -0.3
TUBB6-208ENST00000590388 COCHO43405 550 aa13.15□□□□□ -0.3
TUBB6-208ENST00000590388 GALR2O43603 387 aaPredicted RBP13.15□□□□□ -0.3
TUBB6-208ENST00000590388 TARSP26639 723 aaKnown RBP13.15□□□□□ -0.3
TUBB6-208ENST00000590388 CTHP32929 405 aa13.15□□□□□ -0.3
TUBB6-208ENST00000590388 MAGEA9P43362 315 aa13.15□□□□□ -0.3
TUBB6-208ENST00000590388 PLA2G4AP47712 749 aa13.15□□□□□ -0.3
TUBB6-208ENST00000590388 PGFP49763 221 aa13.15□□□□□ -0.3
TUBB6-208ENST00000590388 MFAP3P55082 362 aa13.15□□□□□ -0.3
TUBB6-208ENST00000590388 PDE4CQ08493 712 aa13.15□□□□□ -0.3
TUBB6-208ENST00000590388 CNGA2Q16280 664 aa13.15□□□□□ -0.3
TUBB6-208ENST00000590388 ITPRIPL2Q3MIP1 535 aa13.15□□□□□ -0.3
TUBB6-208ENST00000590388 DPY19L2P1Q6NXN4 242 aa13.15□□□□□ -0.3
TUBB6-208ENST00000590388 KLHDC10Q6PID8 442 aa13.15□□□□□ -0.3
TUBB6-208ENST00000590388 PIGZQ86VD9 579 aa13.15□□□□□ -0.3
TUBB6-208ENST00000590388 RALGPS2Q86X27 583 aaPredicted RBP13.15□□□□□ -0.3
TUBB6-208ENST00000590388 DDX42Q86XP3 938 aaKnown RBP eCLIP13.15□□□□□ -0.3
TUBB6-208ENST00000590388 CREBRFQ8IUR6 639 aa13.15□□□□□ -0.3
TUBB6-208ENST00000590388 PRSS33Q8NF86 280 aa13.15□□□□□ -0.3
TUBB6-208ENST00000590388 OSCP1Q8WVF1 389 aa13.15□□□□□ -0.3
TUBB6-208ENST00000590388 TFAP2BQ92481 460 aa13.15□□□□□ -0.3
TUBB6-208ENST00000590388 SHC3Q92529 594 aa13.15□□□□□ -0.3
TUBB6-208ENST00000590388 CLDN23Q96B33 292 aa13.15□□□□□ -0.3
TUBB6-208ENST00000590388 ZFRQ96KR1 1074 aaKnown RBP13.15□□□□□ -0.3
TUBB6-208ENST00000590388 ZSWIM1Q9BR11 485 aa13.15□□□□□ -0.3
TUBB6-208ENST00000590388 SIX2Q9NPC8 291 aa13.15□□□□□ -0.3
TUBB6-208ENST00000590388 UBE2TQ9NPD8 197 aaPredicted RBP13.15□□□□□ -0.3
TUBB6-208ENST00000590388 GKN1Q9NS71 199 aa13.15□□□□□ -0.3
TUBB6-208ENST00000590388 GTSE1Q9NYZ3 720 aa13.15□□□□□ -0.3
TUBB6-208ENST00000590388 CLIC5Q9NZA1 410 aa13.15□□□□□ -0.3
TUBB6-208ENST00000590388 HESX1Q9UBX0 185 aa13.15□□□□□ -0.3
TUBB6-208ENST00000590388 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.15□□□□□ -0.3
TUBB6-208ENST00000590388 CPQQ9Y646 472 aa13.15□□□□□ -0.3
TUBB6-208ENST00000590388 SPECC1L-ADORA2AF8WAN1 911 aa13.14□□□□□ -0.31
TUBB6-208ENST00000590388 LEFTY2O00292 366 aa13.14□□□□□ -0.31
TUBB6-208ENST00000590388 STK25O00506 426 aa13.14□□□□□ -0.31
TUBB6-208ENST00000590388 TLR5O60602 858 aa13.14□□□□□ -0.31
TUBB6-208ENST00000590388 ABL1P00519 1130 aa13.14□□□□□ -0.31
TUBB6-208ENST00000590388 RPS9P46781 194 aaKnown RBP13.14□□□□□ -0.31
TUBB6-208ENST00000590388 MYL5Q02045 173 aa13.14□□□□□ -0.31
TUBB6-208ENST00000590388 TYRO3Q06418 890 aa13.14□□□□□ -0.31
TUBB6-208ENST00000590388 TNK2Q07912 1038 aa13.14□□□□□ -0.31
TUBB6-208ENST00000590388 TCF15Q12870 199 aa13.14□□□□□ -0.31
TUBB6-208ENST00000590388 FZD5Q13467 585 aa13.14□□□□□ -0.31
TUBB6-208ENST00000590388 RUNX3Q13761 415 aa13.14□□□□□ -0.31
TUBB6-208ENST00000590388 KLHL40Q2TBA0 621 aa13.14□□□□□ -0.31
TUBB6-208ENST00000590388 HSP90AA4PQ58FG1 418 aa13.14□□□□□ -0.31
TUBB6-208ENST00000590388 PM20D1Q6GTS8 502 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms