RNA–Protein interactions for RNA: ENST00000590260.5

DDX39A-212, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 988 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-212ENST00000590260 SAMSN1Q9NSI8 373 aaKnown RBP19.26■□□□□ 0.67
DDX39A-212ENST00000590260 EHD2Q9NZN4 543 aa19.26■□□□□ 0.67
DDX39A-212ENST00000590260 WNT6Q9Y6F9 365 aa19.26■□□□□ 0.67
DDX39A-212ENST00000590260 USP3Q9Y6I4 520 aa19.26■□□□□ 0.67
DDX39A-212ENST00000590260 SPECC1L-ADORA2AF8WAN1 911 aa19.25■□□□□ 0.67
DDX39A-212ENST00000590260 LEFTY2O00292 366 aa19.25■□□□□ 0.67
DDX39A-212ENST00000590260 O00370 1275 aa19.25■□□□□ 0.67
DDX39A-212ENST00000590260 GABBR2O75899 941 aa19.25■□□□□ 0.67
DDX39A-212ENST00000590260 FGFR1OPO95684 399 aaKnown RBP19.25■□□□□ 0.67
DDX39A-212ENST00000590260 ABL1P00519 1130 aa19.25■□□□□ 0.67
DDX39A-212ENST00000590260 PFKLP17858 780 aa19.25■□□□□ 0.67
DDX39A-212ENST00000590260 TBXAS1P24557 533 aaPredicted RBP19.25■□□□□ 0.67
DDX39A-212ENST00000590260 CTHP32929 405 aa19.25■□□□□ 0.67
DDX39A-212ENST00000590260 KIF11P52732 1056 aa19.25■□□□□ 0.67
DDX39A-212ENST00000590260 PLCB2Q00722 1185 aa19.25■□□□□ 0.67
DDX39A-212ENST00000590260 NAIF1Q69YI7 327 aaPredicted RBP19.25■□□□□ 0.67
DDX39A-212ENST00000590260 ZNF852Q6ZMS4 543 aa19.25■□□□□ 0.67
DDX39A-212ENST00000590260 SCD5Q86SK9 330 aa19.25■□□□□ 0.67
DDX39A-212ENST00000590260 PDZD8Q8NEN9 1154 aa19.25■□□□□ 0.67
DDX39A-212ENST00000590260 CRACR2AQ9BSW2 395 aa19.25■□□□□ 0.67
DDX39A-212ENST00000590260 THAP9Q9H5L6 903 aa19.25■□□□□ 0.67
DDX39A-212ENST00000590260 AJAP1Q9UKB5 411 aaPredicted RBP19.25■□□□□ 0.67
DDX39A-212ENST00000590260 TSPAN16Q9UKR8 245 aa19.25■□□□□ 0.67
DDX39A-212ENST00000590260 NDRG2Q9UN36 371 aaKnown RBP19.25■□□□□ 0.67
DDX39A-212ENST00000590260 CNTN6Q9UQ52 1028 aa19.25■□□□□ 0.67
DDX39A-212ENST00000590260 SCML2Q9UQR0 700 aa19.25■□□□□ 0.67
DDX39A-212ENST00000590260 CPQQ9Y646 472 aa19.25■□□□□ 0.67
DDX39A-212ENST00000590260 SCAMP3O14828 347 aaKnown RBP19.24■□□□□ 0.67
DDX39A-212ENST00000590260 TBX18O95935 607 aa19.24■□□□□ 0.67
DDX39A-212ENST00000590260 GCNT1Q02742 428 aa19.24■□□□□ 0.67
DDX39A-212ENST00000590260 RUNX3Q13761 415 aa19.24■□□□□ 0.67
DDX39A-212ENST00000590260 GOLGA7BQ2TAP0 167 aa19.24■□□□□ 0.67
DDX39A-212ENST00000590260 EML3Q32P44 896 aa19.24■□□□□ 0.67
DDX39A-212ENST00000590260 RAB41Q5JT25 222 aa19.24■□□□□ 0.67
DDX39A-212ENST00000590260 TMEM270Q6UE05 265 aa19.24■□□□□ 0.67
DDX39A-212ENST00000590260 C11orf57Q6ZUT1 292 aaPredicted RBP19.24■□□□□ 0.67
DDX39A-212ENST00000590260 BHLHA9Q7RTU4 235 aa19.24■□□□□ 0.67
DDX39A-212ENST00000590260 PIGZQ86VD9 579 aa19.24■□□□□ 0.67
DDX39A-212ENST00000590260 ANKRD52Q8NB46 1076 aa19.24■□□□□ 0.67
DDX39A-212ENST00000590260 CSGALNACT1Q8TDX6 532 aa19.24■□□□□ 0.67
DDX39A-212ENST00000590260 OSCP1Q8WVF1 389 aa19.24■□□□□ 0.67
DDX39A-212ENST00000590260 FAM3CQ92520 227 aa19.24■□□□□ 0.67
DDX39A-212ENST00000590260 SIX2Q9NPC8 291 aa19.24■□□□□ 0.67
DDX39A-212ENST00000590260 FAM86C1Q9NVL1 165 aa19.24■□□□□ 0.67
DDX39A-212ENST00000590260 SMPD4Q9NXE4 827 aa19.24■□□□□ 0.67
DDX39A-212ENST00000590260 TMEM63CQ9P1W3 806 aa19.24■□□□□ 0.67
DDX39A-212ENST00000590260 A0A1W2PQH9 124 aa19.23■□□□□ 0.67
DDX39A-212ENST00000590260 CHRNB1P11230 501 aa19.23■□□□□ 0.67
DDX39A-212ENST00000590260 VDRP11473 427 aa19.23■□□□□ 0.67
DDX39A-212ENST00000590260 RFX1P22670 979 aa19.23■□□□□ 0.67
DDX39A-212ENST00000590260 PTPN5P54829 565 aa19.23■□□□□ 0.67
DDX39A-212ENST00000590260 PDE4CQ08493 712 aa19.23■□□□□ 0.67
DDX39A-212ENST00000590260 GAS6Q14393 721 aa19.23■□□□□ 0.67
DDX39A-212ENST00000590260 ANGPT1Q15389 498 aa19.23■□□□□ 0.67
DDX39A-212ENST00000590260 GAB4Q2WGN9 574 aa19.23■□□□□ 0.67
DDX39A-212ENST00000590260 ITPRIPL2Q3MIP1 535 aa19.23■□□□□ 0.67
DDX39A-212ENST00000590260 SGO2Q562F6 1265 aa19.23■□□□□ 0.67
DDX39A-212ENST00000590260 TRIM65Q6PJ69 517 aa19.23■□□□□ 0.67
DDX39A-212ENST00000590260 PRRX2Q99811 253 aa19.23■□□□□ 0.67
DDX39A-212ENST00000590260 C8orf33Q9H7E9 229 aaPredicted RBP19.23■□□□□ 0.67
DDX39A-212ENST00000590260 THG1LQ9NWX6 298 aaKnown RBP19.23■□□□□ 0.67
DDX39A-212ENST00000590260 PCDHB4Q9Y5E5 795 aa19.23■□□□□ 0.67
DDX39A-212ENST00000590260 MAN2B1O00754 1011 aa19.22■□□□□ 0.67
DDX39A-212ENST00000590260 GREM1O60565 184 aa19.22■□□□□ 0.67
DDX39A-212ENST00000590260 CD19P15391 556 aa19.22■□□□□ 0.67
DDX39A-212ENST00000590260 TUBP50607 506 aa19.22■□□□□ 0.67
DDX39A-212ENST00000590260 KPNA1P52294 538 aaPredicted RBP19.22■□□□□ 0.67
DDX39A-212ENST00000590260 YWHAEP62258 255 aaKnown RBP19.22■□□□□ 0.67
DDX39A-212ENST00000590260 HECTD3Q5T447 861 aa19.22■□□□□ 0.67
DDX39A-212ENST00000590260 CCDC186Q7Z3E2 898 aa19.22■□□□□ 0.67
DDX39A-212ENST00000590260 RALGPS2Q86X27 583 aaPredicted RBP19.22■□□□□ 0.67
DDX39A-212ENST00000590260 CREBRFQ8IUR6 639 aa19.22■□□□□ 0.67
DDX39A-212ENST00000590260 RBBP8NLQ8NC74 664 aaPredicted RBP19.22■□□□□ 0.67
DDX39A-212ENST00000590260 TTC16Q8NEE8 873 aa19.22■□□□□ 0.67
DDX39A-212ENST00000590260 UBA3Q8TBC4 463 aa19.22■□□□□ 0.67
DDX39A-212ENST00000590260 UBXN6Q9BZV1 441 aa19.22■□□□□ 0.67
DDX39A-212ENST00000590260 FBXO44Q9H4M3 255 aa19.22■□□□□ 0.67
DDX39A-212ENST00000590260 FBRSL1Q9HCM7 1045 aaKnown RBP19.22■□□□□ 0.67
DDX39A-212ENST00000590260 ACP6Q9NPH0 428 aa19.22■□□□□ 0.67
DDX39A-212ENST00000590260 RBM12Q9NTZ6 932 aaKnown RBP19.22■□□□□ 0.67
DDX39A-212ENST00000590260 DUS2Q9NX74 493 aaKnown RBP19.22■□□□□ 0.67
DDX39A-212ENST00000590260 NUDT5Q9UKK9 219 aa19.22■□□□□ 0.67
DDX39A-212ENST00000590260 MYO15AQ9UKN7 3530 aa19.21■□□□□ 0.67
DDX39A-212ENST00000590260 DMDP11532 3685 aa19.21■□□□□ 0.67
DDX39A-212ENST00000590260 BECN2A8MW95 431 aa19.21■□□□□ 0.67
DDX39A-212ENST00000590260 PAEPP09466 180 aa19.21■□□□□ 0.67
DDX39A-212ENST00000590260 MBL2P11226 248 aaPredicted RBP19.21■□□□□ 0.67
DDX39A-212ENST00000590260 BRD2P25440 801 aaKnown RBP19.21■□□□□ 0.67
DDX39A-212ENST00000590260 PON1P27169 355 aa19.21■□□□□ 0.67
DDX39A-212ENST00000590260 MTIF2P46199 727 aaKnown RBP19.21■□□□□ 0.67
DDX39A-212ENST00000590260 RPS9P46781 194 aaKnown RBP19.21■□□□□ 0.67
DDX39A-212ENST00000590260 KCNMA1Q12791 1236 aa19.21■□□□□ 0.67
DDX39A-212ENST00000590260 CETN1Q12798 172 aa19.21■□□□□ 0.67
DDX39A-212ENST00000590260 PON2Q15165 354 aa19.21■□□□□ 0.67
DDX39A-212ENST00000590260 PDGFRLQ15198 375 aa19.21■□□□□ 0.67
DDX39A-212ENST00000590260 MAN2A1Q16706 1144 aa19.21■□□□□ 0.67
DDX39A-212ENST00000590260 LCLAT1Q6UWP7 414 aa19.21■□□□□ 0.67
DDX39A-212ENST00000590260 NDRG1Q92597 394 aaKnown RBP19.21■□□□□ 0.67
DDX39A-212ENST00000590260 EZH1Q92800 747 aaPredicted RBP19.21■□□□□ 0.67
DDX39A-212ENST00000590260 NELL2Q99435 816 aa19.21■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms