RNA–Protein interactions for RNA: ENST00000589878.5

LSM14A-207, Transcript of LSM14A, mRNA processing body assembly factor, humanhuman

TSL 4

Gene LSM14A, Length 559 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM14A-207ENST00000589878 EHD2Q9NZN4 543 aa19.55■□□□□ 0.72
LSM14A-207ENST00000589878 CALCOCO1Q9P1Z2 691 aa19.55■□□□□ 0.72
LSM14A-207ENST00000589878 PCDH15Q96QU1 1955 aa19.55■□□□□ 0.72
LSM14A-207ENST00000589878 FAM221BA6H8Z2 402 aa19.54■□□□□ 0.72
LSM14A-207ENST00000589878 PALM2-AKAP2B1ALY0 433 aaPredicted RBP19.54■□□□□ 0.72
LSM14A-207ENST00000589878 ARHGAP33O14559 1287 aa19.54■□□□□ 0.72
LSM14A-207ENST00000589878 TRIM66O15016 1216 aa19.54■□□□□ 0.72
LSM14A-207ENST00000589878 SH3BP5O60239 455 aa19.54■□□□□ 0.72
LSM14A-207ENST00000589878 CAPNS1P04632 268 aa19.54■□□□□ 0.72
LSM14A-207ENST00000589878 GABRG2P18507 467 aa19.54■□□□□ 0.72
LSM14A-207ENST00000589878 GJB2P29033 226 aa19.54■□□□□ 0.72
LSM14A-207ENST00000589878 HOXD12P35452 270 aa19.54■□□□□ 0.72
LSM14A-207ENST00000589878 CASP5P51878 434 aa19.54■□□□□ 0.72
LSM14A-207ENST00000589878 MAPRE1Q15691 268 aaKnown RBP19.54■□□□□ 0.72
LSM14A-207ENST00000589878 TDRD10Q5VZ19 366 aaKnown RBP19.54■□□□□ 0.72
LSM14A-207ENST00000589878 SLC36A4Q6YBV0 504 aa19.54■□□□□ 0.72
LSM14A-207ENST00000589878 USP49Q70CQ1 688 aa19.54■□□□□ 0.72
LSM14A-207ENST00000589878 DPH6Q7L8W6 267 aa19.54■□□□□ 0.72
LSM14A-207ENST00000589878 PHTF2Q8N3S3 785 aa19.54■□□□□ 0.72
LSM14A-207ENST00000589878 ZNF513Q8N8E2 541 aaPredicted RBP19.54■□□□□ 0.72
LSM14A-207ENST00000589878 PNPLA1Q8N8W4 532 aa19.54■□□□□ 0.72
LSM14A-207ENST00000589878 SPRYD3Q8NCJ5 442 aa19.54■□□□□ 0.72
LSM14A-207ENST00000589878 OR5B17Q8NGF7 314 aa19.54■□□□□ 0.72
LSM14A-207ENST00000589878 ANKRD36BP1Q96IX9 119 aa19.54■□□□□ 0.72
LSM14A-207ENST00000589878 EPSTI1Q96J88 318 aa19.54■□□□□ 0.72
LSM14A-207ENST00000589878 KIF2CQ99661 725 aa19.54■□□□□ 0.72
LSM14A-207ENST00000589878 GPSM3Q9Y4H4 160 aa19.54■□□□□ 0.72
LSM14A-207ENST00000589878 PCDHB9Q9Y5E1 797 aa19.54■□□□□ 0.72
LSM14A-207ENST00000589878 OLFM2O95897 454 aa19.53■□□□□ 0.72
LSM14A-207ENST00000589878 OAS1P00973 400 aaKnown RBP19.53■□□□□ 0.72
LSM14A-207ENST00000589878 HOXB2P14652 356 aa19.53■□□□□ 0.72
LSM14A-207ENST00000589878 GARTP22102 1010 aa19.53■□□□□ 0.72
LSM14A-207ENST00000589878 PPP3CCP48454 512 aa19.53■□□□□ 0.72
LSM14A-207ENST00000589878 CACNA2D1P54289 1103 aa19.53■□□□□ 0.72
LSM14A-207ENST00000589878 NOP14P78316 857 aaKnown RBP19.53■□□□□ 0.72
LSM14A-207ENST00000589878 GAD2Q05329 585 aa19.53■□□□□ 0.72
LSM14A-207ENST00000589878 TRIP6Q15654 476 aaKnown RBP19.53■□□□□ 0.72
LSM14A-207ENST00000589878 BTBD8Q5XKL5 378 aa19.53■□□□□ 0.72
LSM14A-207ENST00000589878 SLC41A1Q8IVJ1 513 aa19.53■□□□□ 0.72
LSM14A-207ENST00000589878 MYCBPAPQ8TBZ2 947 aa19.53■□□□□ 0.72
LSM14A-207ENST00000589878 TBC1D14Q9P2M4 693 aa19.53■□□□□ 0.72
LSM14A-207ENST00000589878 LAMA5O15230 3695 aa19.53■□□□□ 0.72
LSM14A-207ENST00000589878 PTPRJQ12913 1337 aa19.52■□□□□ 0.72
LSM14A-207ENST00000589878 TRIM24O15164 1050 aa19.52■□□□□ 0.72
LSM14A-207ENST00000589878 TNNC2P02585 160 aa19.52■□□□□ 0.72
LSM14A-207ENST00000589878 SYPP08247 313 aa19.52■□□□□ 0.72
LSM14A-207ENST00000589878 WARSP23381 471 aaKnown RBP19.52■□□□□ 0.72
LSM14A-207ENST00000589878 COL28A1Q2UY09 1125 aa19.52■□□□□ 0.72
LSM14A-207ENST00000589878 ANO4Q32M45 955 aa19.52■□□□□ 0.72
LSM14A-207ENST00000589878 C10orf76Q5T2E6 689 aa19.52■□□□□ 0.72
LSM14A-207ENST00000589878 LIMS2Q7Z4I7 341 aa19.52■□□□□ 0.72
LSM14A-207ENST00000589878 PDZD3Q86UT5 571 aa19.52■□□□□ 0.72
LSM14A-207ENST00000589878 DDX42Q86XP3 938 aaKnown RBP eCLIP19.52■□□□□ 0.72
LSM14A-207ENST00000589878 RGL4Q8IZJ4 473 aa19.52■□□□□ 0.72
LSM14A-207ENST00000589878 KIAA1958Q8N8K9 716 aa19.52■□□□□ 0.72
LSM14A-207ENST00000589878 TRIML1Q8N9V2 468 aa19.52■□□□□ 0.72
LSM14A-207ENST00000589878 C8orf48Q96LL4 319 aa19.52■□□□□ 0.72
LSM14A-207ENST00000589878 CEP295NLQ96MC4 621 aa19.52■□□□□ 0.72
LSM14A-207ENST00000589878 HSPA12BQ96MM6 686 aa19.52■□□□□ 0.72
LSM14A-207ENST00000589878 SLITRK1Q96PX8 696 aa19.52■□□□□ 0.72
LSM14A-207ENST00000589878 MRPL45Q9BRJ2 306 aaKnown RBP19.52■□□□□ 0.72
LSM14A-207ENST00000589878 FGFBP2Q9BYJ0 223 aa19.52■□□□□ 0.72
LSM14A-207ENST00000589878 SNX25Q9H3E2 840 aa19.52■□□□□ 0.72
LSM14A-207ENST00000589878 INTS13Q9NVM9 706 aa19.52■□□□□ 0.72
LSM14A-207ENST00000589878 DEC1Q9P2X7 70 aa19.52■□□□□ 0.72
LSM14A-207ENST00000589878 SEL1LQ9UBV2 794 aa19.52■□□□□ 0.72
LSM14A-207ENST00000589878 CYP8B1Q9UNU6 501 aa19.52■□□□□ 0.72
LSM14A-207ENST00000589878 PCDHB13Q9Y5F0 798 aa19.52■□□□□ 0.72
LSM14A-207ENST00000589878 IGHV1OR15-9A0A0B4J2B8 117 aa19.51■□□□□ 0.71
LSM14A-207ENST00000589878 TULP3O75386 442 aa19.51■□□□□ 0.71
LSM14A-207ENST00000589878 IDEP14735 1019 aa19.51■□□□□ 0.71
LSM14A-207ENST00000589878 GAP43P17677 238 aa19.51■□□□□ 0.71
LSM14A-207ENST00000589878 GNL1P36915 607 aaPredicted RBP19.51■□□□□ 0.71
LSM14A-207ENST00000589878 SF3A1Q15459 793 aaKnown RBP19.51■□□□□ 0.71
LSM14A-207ENST00000589878 PLEKHG6Q3KR16 790 aa19.51■□□□□ 0.71
LSM14A-207ENST00000589878 SOWAHCQ53LP3 525 aaPredicted RBP19.51■□□□□ 0.71
LSM14A-207ENST00000589878 TRMT11Q7Z4G4 463 aaKnown RBP19.51■□□□□ 0.71
LSM14A-207ENST00000589878 RABEPKQ7Z6M1 372 aa19.51■□□□□ 0.71
LSM14A-207ENST00000589878 MIB1Q86YT6 1006 aa19.51■□□□□ 0.71
LSM14A-207ENST00000589878 OR6B3Q8NGW1 331 aa19.51■□□□□ 0.71
LSM14A-207ENST00000589878 DNAJC19Q96DA6 116 aa19.51■□□□□ 0.71
LSM14A-207ENST00000589878 TMEM30AQ9NV96 361 aa19.51■□□□□ 0.71
LSM14A-207ENST00000589878 DNAAF2Q9NVR5 837 aaKnown RBP19.51■□□□□ 0.71
LSM14A-207ENST00000589878 CHORDC1Q9UHD1 332 aaPredicted RBP19.51■□□□□ 0.71
LSM14A-207ENST00000589878 HCN2Q9UL51 889 aa19.51■□□□□ 0.71
LSM14A-207ENST00000589878 SH3BP1Q9Y3L3 701 aa19.51■□□□□ 0.71
LSM14A-207ENST00000589878 NME7Q9Y5B8 376 aa19.51■□□□□ 0.71
LSM14A-207ENST00000589878 E2F8A0AVK6 867 aa19.5■□□□□ 0.71
LSM14A-207ENST00000589878 CLDN5O00501 218 aa19.5■□□□□ 0.71
LSM14A-207ENST00000589878 ZBTB24O43167 697 aaPredicted RBP19.5■□□□□ 0.71
LSM14A-207ENST00000589878 COCHO43405 550 aa19.5■□□□□ 0.71
LSM14A-207ENST00000589878 PRPF6O94906 941 aaKnown RBP19.5■□□□□ 0.71
LSM14A-207ENST00000589878 IRF1P10914 325 aa19.5■□□□□ 0.71
LSM14A-207ENST00000589878 NTSR1P30989 418 aa19.5■□□□□ 0.71
LSM14A-207ENST00000589878 HNRNPDQ14103 355 aaKnown RBP19.5■□□□□ 0.71
LSM14A-207ENST00000589878 DUOXA2Q1HG44 320 aa19.5■□□□□ 0.71
LSM14A-207ENST00000589878 TMEM25Q86YD3 366 aa19.5■□□□□ 0.71
LSM14A-207ENST00000589878 BBS7Q8IWZ6 715 aa19.5■□□□□ 0.71
LSM14A-207ENST00000589878 ETFBKMTQ8IXQ9 262 aa19.5■□□□□ 0.71
LSM14A-207ENST00000589878 GPD1LQ8N335 351 aa19.5■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms