RNA–Protein interactions for RNA: ENST00000589532.5

LSM7-205, Transcript of LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM7, Length 539 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM7-205ENST00000589532 NR1H3Q13133 447 aa25.24■■□□□ 1.63
LSM7-205ENST00000589532 BIRC3Q13489 604 aa25.24■■□□□ 1.63
LSM7-205ENST00000589532 ZACNQ401N2 412 aa25.24■■□□□ 1.63
LSM7-205ENST00000589532 PLA2G2CQ5R387 149 aa25.24■■□□□ 1.63
LSM7-205ENST00000589532 C1orf220Q5T0J3 134 aa25.24■■□□□ 1.63
LSM7-205ENST00000589532 SCARA5Q6ZMJ2 495 aa25.24■■□□□ 1.63
LSM7-205ENST00000589532 ELOA2Q8IYF1 753 aaPredicted RBP25.24■■□□□ 1.63
LSM7-205ENST00000589532 USP33Q8TEY7 942 aa25.24■■□□□ 1.63
LSM7-205ENST00000589532 OVCA2Q8WZ82 227 aa25.24■■□□□ 1.63
LSM7-205ENST00000589532 KCNK16Q96T55 309 aa25.24■■□□□ 1.63
LSM7-205ENST00000589532 SMPD4Q9NXE4 827 aa25.24■■□□□ 1.63
LSM7-205ENST00000589532 PDXKO00764 312 aa25.23■■□□□ 1.63
LSM7-205ENST00000589532 GADD45BO75293 160 aaPredicted RBP25.23■■□□□ 1.63
LSM7-205ENST00000589532 SMC2O95347 1197 aa25.23■■□□□ 1.63
LSM7-205ENST00000589532 APBB3O95704 486 aa25.23■■□□□ 1.63
LSM7-205ENST00000589532 MESP2Q0VG99 397 aa25.23■■□□□ 1.63
LSM7-205ENST00000589532 PLK5Q496M5 336 aa25.23■■□□□ 1.63
LSM7-205ENST00000589532 ZNF667Q5HYK9 610 aa25.23■■□□□ 1.63
LSM7-205ENST00000589532 SNX30Q5VWJ9 437 aa25.23■■□□□ 1.63
LSM7-205ENST00000589532 ADGRG2Q8IZP9 1017 aa25.23■■□□□ 1.63
LSM7-205ENST00000589532 FUKQ8N0W3 1084 aa25.23■■□□□ 1.63
LSM7-205ENST00000589532 NUP93Q8N1F7 819 aa25.23■■□□□ 1.63
LSM7-205ENST00000589532 PDZD8Q8NEN9 1154 aa25.23■■□□□ 1.63
LSM7-205ENST00000589532 GTPBP4Q9BZE4 634 aaKnown RBP25.23■■□□□ 1.63
LSM7-205ENST00000589532 ARRDC1-AS1Q9H2J1 176 aa25.23■■□□□ 1.63
LSM7-205ENST00000589532 RMND1Q9NWS8 449 aa25.23■■□□□ 1.63
LSM7-205ENST00000589532 HMGXB4Q9UGU5 601 aa25.23■■□□□ 1.63
LSM7-205ENST00000589532 CEP295Q9C0D2 2601 aa25.22■■□□□ 1.63
LSM7-205ENST00000589532 PHACTR2O75167 634 aa25.22■■□□□ 1.63
LSM7-205ENST00000589532 RTN3O95197 1032 aaPredicted RBP25.22■■□□□ 1.63
LSM7-205ENST00000589532 KIF20AO95235 890 aa25.22■■□□□ 1.63
LSM7-205ENST00000589532 NR3C1P04150 777 aa25.22■■□□□ 1.63
LSM7-205ENST00000589532 ZDHHC11BP0C7U3 371 aa25.22■■□□□ 1.63
LSM7-205ENST00000589532 ZNF806P0C7X5 589 aa25.22■■□□□ 1.63
LSM7-205ENST00000589532 CCDC192P0DO97 292 aa25.22■■□□□ 1.63
LSM7-205ENST00000589532 YWHAQP27348 245 aa25.22■■□□□ 1.63
LSM7-205ENST00000589532 SLC5A3P53794 718 aa25.22■■□□□ 1.63
LSM7-205ENST00000589532 DHCR24Q15392 516 aa25.22■■□□□ 1.63
LSM7-205ENST00000589532 ZMIZ2Q8NF64 920 aa25.22■■□□□ 1.63
LSM7-205ENST00000589532 DMAP1Q9NPF5 467 aaPredicted RBP25.22■■□□□ 1.63
LSM7-205ENST00000589532 CFAP97Q9P2B7 532 aa25.22■■□□□ 1.63
LSM7-205ENST00000589532 PCDHGA5Q9Y5G8 931 aa25.22■■□□□ 1.63
LSM7-205ENST00000589532 MYOFQ9NZM1 2061 aa25.21■■□□□ 1.63
LSM7-205ENST00000589532 SCAMP3O14828 347 aaKnown RBP25.21■■□□□ 1.63
LSM7-205ENST00000589532 COCHO43405 550 aa25.21■■□□□ 1.63
LSM7-205ENST00000589532 RPN1P04843 607 aaKnown RBP25.21■■□□□ 1.63
LSM7-205ENST00000589532 ASPAP45381 313 aa25.21■■□□□ 1.63
LSM7-205ENST00000589532 LIMK1P53667 647 aa25.21■■□□□ 1.63
LSM7-205ENST00000589532 IFRD2Q12894 506 aaPredicted RBP25.21■■□□□ 1.63
LSM7-205ENST00000589532 SF3A2Q15428 464 aaKnown RBP25.21■■□□□ 1.63
LSM7-205ENST00000589532 RASSF3Q86WH2 238 aa25.21■■□□□ 1.63
LSM7-205ENST00000589532 C12orf40Q86WS4 652 aa25.21■■□□□ 1.63
LSM7-205ENST00000589532 SFTPA1Q8IWL2 248 aa25.21■■□□□ 1.63
LSM7-205ENST00000589532 SCAMP5Q8TAC9 235 aa25.21■■□□□ 1.63
LSM7-205ENST00000589532 TMC2Q8TDI7 906 aa25.21■■□□□ 1.63
LSM7-205ENST00000589532 FBXO32Q969P5 355 aa25.21■■□□□ 1.63
LSM7-205ENST00000589532 SMARCD1Q96GM5 515 aa25.21■■□□□ 1.63
LSM7-205ENST00000589532 DUSP9Q99956 384 aaKnown RBP25.21■■□□□ 1.63
LSM7-205ENST00000589532 DUSP15Q9H1R2 295 aaPredicted RBP25.21■■□□□ 1.63
LSM7-205ENST00000589532 RXFP3Q9NSD7 469 aa25.21■■□□□ 1.63
LSM7-205ENST00000589532 ATP8B3O60423 1300 aa25.2■■□□□ 1.62
LSM7-205ENST00000589532 ASS1P00966 412 aaKnown RBP25.2■■□□□ 1.62
LSM7-205ENST00000589532 EIF2DP41214 584 aaKnown RBP25.2■■□□□ 1.62
LSM7-205ENST00000589532 TUBP50607 506 aa25.2■■□□□ 1.62
LSM7-205ENST00000589532 DPYDQ12882 1025 aa25.2■■□□□ 1.62
LSM7-205ENST00000589532 CCDC6Q16204 474 aa25.2■■□□□ 1.62
LSM7-205ENST00000589532 RHBDF2Q6PJF5 856 aa25.2■■□□□ 1.62
LSM7-205ENST00000589532 DDX42Q86XP3 938 aaKnown RBP eCLIP25.2■■□□□ 1.62
LSM7-205ENST00000589532 PHTF2Q8N3S3 785 aa25.2■■□□□ 1.62
LSM7-205ENST00000589532 TNIP3Q96KP6 325 aa25.2■■□□□ 1.62
LSM7-205ENST00000589532 CSNK1G1Q9HCP0 422 aa25.2■■□□□ 1.62
LSM7-205ENST00000589532 KRT82Q9NSB4 513 aa25.2■■□□□ 1.62
LSM7-205ENST00000589532 TRAF3IP3Q9Y228 551 aa25.2■■□□□ 1.62
LSM7-205ENST00000589532 SLC9A3R1O14745 358 aaPredicted RBP25.19■■□□□ 1.62
LSM7-205ENST00000589532 ADRB1P08588 477 aa25.19■■□□□ 1.62
LSM7-205ENST00000589532 MBL2P11226 248 aaPredicted RBP25.19■■□□□ 1.62
LSM7-205ENST00000589532 CCDC130P13994 396 aa25.19■■□□□ 1.62
LSM7-205ENST00000589532 SV2AQ7L0J3 742 aa25.19■■□□□ 1.62
LSM7-205ENST00000589532 CCDC26Q8TAB7 109 aa25.19■■□□□ 1.62
LSM7-205ENST00000589532 SMOQ99835 787 aa25.19■■□□□ 1.62
LSM7-205ENST00000589532 MMP17Q9ULZ9 603 aa25.19■■□□□ 1.62
LSM7-205ENST00000589532 DCLK1O15075 740 aa25.18■■□□□ 1.62
LSM7-205ENST00000589532 BEST1O76090 585 aa25.18■■□□□ 1.62
LSM7-205ENST00000589532 ABL1P00519 1130 aa25.18■■□□□ 1.62
LSM7-205ENST00000589532 PRR29P0C7W0 189 aa25.18■■□□□ 1.62
LSM7-205ENST00000589532 HNRNPLP14866 589 aaKnown RBP eCLIP25.18■■□□□ 1.62
LSM7-205ENST00000589532 MPLP40238 635 aa25.18■■□□□ 1.62
LSM7-205ENST00000589532 PGFP49763 221 aa25.18■■□□□ 1.62
LSM7-205ENST00000589532 ORC1Q13415 861 aa25.18■■□□□ 1.62
LSM7-205ENST00000589532 SPOPLQ6IQ16 392 aa25.18■■□□□ 1.62
LSM7-205ENST00000589532 ACOT1Q86TX2 421 aa25.18■■□□□ 1.62
LSM7-205ENST00000589532 CRYBG2Q8N1P7 616 aa25.18■■□□□ 1.62
LSM7-205ENST00000589532 TAF4BQ92750 862 aa25.18■■□□□ 1.62
LSM7-205ENST00000589532 CCSER2Q9H7U1 834 aa25.18■■□□□ 1.62
LSM7-205ENST00000589532 COMMD8Q9NX08 183 aa25.18■■□□□ 1.62
LSM7-205ENST00000589532 GMIPQ9P107 970 aa25.18■■□□□ 1.62
LSM7-205ENST00000589532 PLXND1Q9Y4D7 1925 aa25.18■■□□□ 1.62
LSM7-205ENST00000589532 USP24Q9UPU5 2620 aa25.17■■□□□ 1.62
LSM7-205ENST00000589532 MAP1BP46821 2468 aaKnown RBP25.17■■□□□ 1.62
LSM7-205ENST00000589532 A0A0A0MRY4 1105 aa25.17■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms