RNA–Protein interactions for RNA: ENST00000589428.5

R3HDM4-204, Transcript of R3H domain containing 4, humanhuman

TSL 3

Gene R3HDM4, Length 1,704 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM4-204ENST00000589428 STKLD1Q8NE28 680 aa22.43■■□□□ 1.18
R3HDM4-204ENST00000589428 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP22.43■■□□□ 1.182e-18■■■■□ 20.6
R3HDM4-204ENST00000589428 EHD2Q9NZN4 543 aa22.43■■□□□ 1.18
R3HDM4-204ENST00000589428 UXTQ9UBK9 157 aaPredicted RBP22.43■■□□□ 1.18
R3HDM4-204ENST00000589428 PCDHGC3Q9UN70 934 aa22.43■■□□□ 1.18
R3HDM4-204ENST00000589428 WDR3Q9UNX4 943 aaKnown RBP eCLIP22.43■■□□□ 1.18
R3HDM4-204ENST00000589428 A0A0U1RQJ8 604 aa22.42■■□□□ 1.18
R3HDM4-204ENST00000589428 USP27XA6NNY8 438 aa22.42■■□□□ 1.18
R3HDM4-204ENST00000589428 MED7O43513 233 aa22.42■■□□□ 1.18
R3HDM4-204ENST00000589428 KRT83P78385 493 aa22.42■■□□□ 1.18
R3HDM4-204ENST00000589428 MTMR3Q13615 1198 aa22.42■■□□□ 1.18
R3HDM4-204ENST00000589428 CLEC16AQ2KHT3 1053 aa22.42■■□□□ 1.18
R3HDM4-204ENST00000589428 SLC5A9Q2M3M2 681 aa22.42■■□□□ 1.18
R3HDM4-204ENST00000589428 CCDC122Q5T0U0 273 aa22.42■■□□□ 1.18
R3HDM4-204ENST00000589428 DNAAF5Q86Y56 855 aa22.42■■□□□ 1.18
R3HDM4-204ENST00000589428 ATRIPQ8WXE1 791 aa22.42■■□□□ 1.18
R3HDM4-204ENST00000589428 ZNF334Q9HCZ1 680 aaPredicted RBP22.42■■□□□ 1.18
R3HDM4-204ENST00000589428 TMEM30AQ9NV96 361 aa22.42■■□□□ 1.18
R3HDM4-204ENST00000589428 PCDHA13Q9Y5I0 950 aa22.42■■□□□ 1.18
R3HDM4-204ENST00000589428 DOCK6Q96HP0 2047 aa22.41■■□□□ 1.18
R3HDM4-204ENST00000589428 CYP1A1P04798 512 aaPredicted RBP22.41■■□□□ 1.18
R3HDM4-204ENST00000589428 NPR3P17342 541 aa22.41■■□□□ 1.18
R3HDM4-204ENST00000589428 GABRR2P28476 465 aa22.41■■□□□ 1.18
R3HDM4-204ENST00000589428 MAP3K7CLP57077 242 aa22.41■■□□□ 1.18
R3HDM4-204ENST00000589428 SLC8A3P57103 927 aa22.41■■□□□ 1.18
R3HDM4-204ENST00000589428 CNGA2Q16280 664 aa22.41■■□□□ 1.18
R3HDM4-204ENST00000589428 PRSS36Q5K4E3 855 aa22.41■■□□□ 1.18
R3HDM4-204ENST00000589428 TRIM72Q6ZMU5 477 aa22.41■■□□□ 1.18
R3HDM4-204ENST00000589428 CLEC20AQ6ZU45 233 aa22.41■■□□□ 1.18
R3HDM4-204ENST00000589428 CCAR2Q8N163 923 aaKnown RBP22.41■■□□□ 1.18
R3HDM4-204ENST00000589428 ITFG1Q8TB96 612 aa22.41■■□□□ 1.18
R3HDM4-204ENST00000589428 KCNK16Q96T55 309 aa22.41■■□□□ 1.18
R3HDM4-204ENST00000589428 LRRC3Q9BY71 257 aa22.41■■□□□ 1.18
R3HDM4-204ENST00000589428 PDCL3Q9H2J4 239 aa22.41■■□□□ 1.18
R3HDM4-204ENST00000589428 HESX1Q9UBX0 185 aa22.41■■□□□ 1.18
R3HDM4-204ENST00000589428 TSPAN16Q9UKR8 245 aa22.41■■□□□ 1.18
R3HDM4-204ENST00000589428 TMCO5BA8MYB1 307 aa22.4■■□□□ 1.18
R3HDM4-204ENST00000589428 C2CD4DB7Z1M9 353 aa22.4■■□□□ 1.18
R3HDM4-204ENST00000589428 MICAL2O94851 1124 aa22.4■■□□□ 1.18
R3HDM4-204ENST00000589428 UNGP13051 313 aaPredicted RBP22.4■■□□□ 1.18
R3HDM4-204ENST00000589428 HMGA1P17096 107 aaKnown RBP22.4■■□□□ 1.18
R3HDM4-204ENST00000589428 CDC25CP30307 473 aa22.4■■□□□ 1.18
R3HDM4-204ENST00000589428 NOMO3P69849 1222 aa22.4■■□□□ 1.18
R3HDM4-204ENST00000589428 STILQ15468 1287 aa22.4■■□□□ 1.18
R3HDM4-204ENST00000589428 GOLGA7BQ2TAP0 167 aa22.4■■□□□ 1.18
R3HDM4-204ENST00000589428 DENND1BQ6P3S1 775 aa22.4■■□□□ 1.18
R3HDM4-204ENST00000589428 LCLAT1Q6UWP7 414 aa22.4■■□□□ 1.18
R3HDM4-204ENST00000589428 ING5Q8WYH8 240 aa22.4■■□□□ 1.18
R3HDM4-204ENST00000589428 TCEAL4Q96EI5 215 aa22.4■■□□□ 1.18
R3HDM4-204ENST00000589428 TRMT2BQ96GJ1 504 aaKnown RBP22.4■■□□□ 1.18
R3HDM4-204ENST00000589428 UHRF1Q96T88 793 aaPredicted RBP22.4■■□□□ 1.18
R3HDM4-204ENST00000589428 SMOQ99835 787 aa22.4■■□□□ 1.18
R3HDM4-204ENST00000589428 PACSIN1Q9BY11 444 aa22.4■■□□□ 1.18
R3HDM4-204ENST00000589428 DUSP16Q9BY84 665 aa22.4■■□□□ 1.18
R3HDM4-204ENST00000589428 CSNK1G1Q9HCP0 422 aa22.4■■□□□ 1.18
R3HDM4-204ENST00000589428 TRMT1Q9NXH9 659 aaKnown RBP22.4■■□□□ 1.18
R3HDM4-204ENST00000589428 TFR2Q9UP52 801 aa22.4■■□□□ 1.18
R3HDM4-204ENST00000589428 A0A1W2PRU2 124 aa22.4■■□□□ 1.18
R3HDM4-204ENST00000589428 RCCD1A6NED2 376 aa22.4■■□□□ 1.18
R3HDM4-204ENST00000589428 LSM8O95777 96 aaKnown RBP22.4■■□□□ 1.18
R3HDM4-204ENST00000589428 GZMAP12544 262 aa22.4■■□□□ 1.18
R3HDM4-204ENST00000589428 CEBPBP17676 345 aa22.4■■□□□ 1.18
R3HDM4-204ENST00000589428 CCR2P41597 374 aa22.4■■□□□ 1.18
R3HDM4-204ENST00000589428 MAGEA1P43355 309 aa22.4■■□□□ 1.18
R3HDM4-204ENST00000589428 BCAT1P54687 386 aa22.4■■□□□ 1.18
R3HDM4-204ENST00000589428 NAA35Q5VZE5 725 aa22.4■■□□□ 1.18
R3HDM4-204ENST00000589428 NUP93Q8N1F7 819 aa22.4■■□□□ 1.18
R3HDM4-204ENST00000589428 PLCD3Q8N3E9 789 aa22.4■■□□□ 1.18
R3HDM4-204ENST00000589428 FGF13Q92913 245 aa22.4■■□□□ 1.18
R3HDM4-204ENST00000589428 MYRFLQ96LU7 910 aa22.4■■□□□ 1.18
R3HDM4-204ENST00000589428 MYADMQ96S97 322 aa22.4■■□□□ 1.18
R3HDM4-204ENST00000589428 ATXN3LQ9H3M9 355 aa22.4■■□□□ 1.18
R3HDM4-204ENST00000589428 KCND1Q9NSA2 647 aa22.4■■□□□ 1.18
R3HDM4-204ENST00000589428 CDH7Q9ULB5 785 aa22.4■■□□□ 1.18
R3HDM4-204ENST00000589428 ZFP37Q9Y6Q3 630 aaPredicted RBP22.4■■□□□ 1.18
R3HDM4-204ENST00000589428 NOTCH4Q99466 2003 aa22.39■■□□□ 1.18
R3HDM4-204ENST00000589428 MYH10P35580 1976 aa22.39■■□□□ 1.18
R3HDM4-204ENST00000589428 LOC730098B7Z3J9 87 aa22.39■■□□□ 1.17
R3HDM4-204ENST00000589428 M0QYV0 167 aa22.39■■□□□ 1.17
R3HDM4-204ENST00000589428 RTN3O95197 1032 aaPredicted RBP22.39■■□□□ 1.17
R3HDM4-204ENST00000589428 VAV2P52735 878 aa22.39■■□□□ 1.17
R3HDM4-204ENST00000589428 CENPCQ03188 943 aa22.39■■□□□ 1.17
R3HDM4-204ENST00000589428 IFRD2Q12894 506 aaPredicted RBP22.39■■□□□ 1.17
R3HDM4-204ENST00000589428 NPAS3Q8IXF0 933 aa22.39■■□□□ 1.17
R3HDM4-204ENST00000589428 ANKRD52Q8NB46 1076 aa22.39■■□□□ 1.17
R3HDM4-204ENST00000589428 ZMIZ2Q8NF64 920 aa22.39■■□□□ 1.17
R3HDM4-204ENST00000589428 ISCUQ9H1K1 167 aa22.39■■□□□ 1.17
R3HDM4-204ENST00000589428 ZSCAN12O43309 604 aa22.38■■□□□ 1.17
R3HDM4-204ENST00000589428 BEST1O76090 585 aa22.38■■□□□ 1.17
R3HDM4-204ENST00000589428 CDH5P33151 784 aaPredicted RBP22.38■■□□□ 1.17
R3HDM4-204ENST00000589428 SLC5A3P53794 718 aa22.38■■□□□ 1.17
R3HDM4-204ENST00000589428 ARHGAP15Q53QZ3 475 aa22.38■■□□□ 1.17
R3HDM4-204ENST00000589428 C10orf76Q5T2E6 689 aa22.38■■□□□ 1.17
R3HDM4-204ENST00000589428 KIAA1328Q86T90 577 aa22.38■■□□□ 1.17
R3HDM4-204ENST00000589428 REXO1L1PQ8IX06 675 aa22.38■■□□□ 1.17
R3HDM4-204ENST00000589428 WDTC1Q8N5D0 677 aa22.38■■□□□ 1.17
R3HDM4-204ENST00000589428 C1orf131Q8NDD1 294 aaKnown RBP22.38■■□□□ 1.17
R3HDM4-204ENST00000589428 SHKBP1Q8TBC3 707 aa22.38■■□□□ 1.17
R3HDM4-204ENST00000589428 CPA5Q8WXQ8 436 aa22.38■■□□□ 1.17
R3HDM4-204ENST00000589428 PPP1R13BQ96KQ4 1090 aa22.38■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms