RNA–Protein interactions for RNA: ENST00000587988.5

SMARCA4-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 552 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-213ENST00000587988 DENND4CQ5VZ89 1909 aa11.27□□□□□ -0.6
SMARCA4-213ENST00000587988 A0A1W2PRU2 124 aa11.27□□□□□ -0.61
SMARCA4-213ENST00000587988 E5RJQ4 531 aa11.27□□□□□ -0.61
SMARCA4-213ENST00000587988 LSM8O95777 96 aaKnown RBP11.27□□□□□ -0.61
SMARCA4-213ENST00000587988 ERBB2P04626 1255 aa11.27□□□□□ -0.61
SMARCA4-213ENST00000587988 CEBPBP17676 345 aa11.27□□□□□ -0.61
SMARCA4-213ENST00000587988 EIF4A3P38919 411 aaKnown RBP11.27□□□□□ -0.61
SMARCA4-213ENST00000587988 MTHFRP42898 656 aa11.27□□□□□ -0.61
SMARCA4-213ENST00000587988 CYP4F8P98187 520 aa11.27□□□□□ -0.61
SMARCA4-213ENST00000587988 PTPN20Q4JDL3 420 aa11.27□□□□□ -0.61
SMARCA4-213ENST00000587988 STXBP5Q5T5C0 1151 aa11.27□□□□□ -0.61
SMARCA4-213ENST00000587988 CYP4A22Q5TCH4 519 aa11.27□□□□□ -0.61
SMARCA4-213ENST00000587988 BHLHA9Q7RTU4 235 aa11.27□□□□□ -0.61
SMARCA4-213ENST00000587988 TMEM110Q86TL2 294 aa11.27□□□□□ -0.61
SMARCA4-213ENST00000587988 SCUBE3Q8IX30 993 aa11.27□□□□□ -0.61
SMARCA4-213ENST00000587988 SHKBP1Q8TBC3 707 aa11.27□□□□□ -0.61
SMARCA4-213ENST00000587988 STK32AQ8WU08 396 aa11.27□□□□□ -0.61
SMARCA4-213ENST00000587988 ING5Q8WYH8 240 aa11.27□□□□□ -0.61
SMARCA4-213ENST00000587988 PPP1R13BQ96KQ4 1090 aa11.27□□□□□ -0.61
SMARCA4-213ENST00000587988 RIPOR3Q96MK2 946 aa11.27□□□□□ -0.61
SMARCA4-213ENST00000587988 MIS12Q9H081 205 aa11.27□□□□□ -0.61
SMARCA4-213ENST00000587988 ATXN3LQ9H3M9 355 aa11.27□□□□□ -0.61
SMARCA4-213ENST00000587988 FBXO44Q9H4M3 255 aa11.27□□□□□ -0.61
SMARCA4-213ENST00000587988 AVENQ9NQS1 362 aaPredicted RBP11.27□□□□□ -0.61
SMARCA4-213ENST00000587988 COMMD8Q9NX08 183 aa11.27□□□□□ -0.61
SMARCA4-213ENST00000587988 GMIPQ9P107 970 aa11.27□□□□□ -0.61
SMARCA4-213ENST00000587988 IMPACTQ9P2X3 320 aa11.27□□□□□ -0.61
SMARCA4-213ENST00000587988 UXTQ9UBK9 157 aaPredicted RBP11.27□□□□□ -0.61
SMARCA4-213ENST00000587988 ADAMTS1Q9UHI8 967 aa11.27□□□□□ -0.61
SMARCA4-213ENST00000587988 SCML2Q9UQR0 700 aa11.27□□□□□ -0.61
SMARCA4-213ENST00000587988 CEP83Q9Y592 693 aa11.27□□□□□ -0.61
SMARCA4-213ENST00000587988 BZW2Q9Y6E2 419 aaKnown RBP11.27□□□□□ -0.61
SMARCA4-213ENST00000587988 CLUHO75153 1309 aa11.27□□□□□ -0.61
SMARCA4-213ENST00000587988 DENND4AQ7Z401 1863 aa11.27□□□□□ -0.61
SMARCA4-213ENST00000587988 ANAPC1Q9H1A4 1944 aa11.27□□□□□ -0.61
SMARCA4-213ENST00000587988 A0A087X0T9 212 aa11.26□□□□□ -0.61
SMARCA4-213ENST00000587988 TMCO5BA8MYB1 307 aa11.26□□□□□ -0.61
SMARCA4-213ENST00000587988 PAPSS1O43252 624 aaPredicted RBP11.26□□□□□ -0.61
SMARCA4-213ENST00000587988 FAM228BP0C875 321 aa11.26□□□□□ -0.61
SMARCA4-213ENST00000587988 IL9P15248 144 aa11.26□□□□□ -0.61
SMARCA4-213ENST00000587988 FSHRP23945 695 aa11.26□□□□□ -0.61
SMARCA4-213ENST00000587988 ACADSBP45954 432 aa11.26□□□□□ -0.61
SMARCA4-213ENST00000587988 KCNQ1P51787 676 aa11.26□□□□□ -0.61
SMARCA4-213ENST00000587988 DAOAP59103 153 aa11.26□□□□□ -0.61
SMARCA4-213ENST00000587988 CENPCQ03188 943 aa11.26□□□□□ -0.61
SMARCA4-213ENST00000587988 MAPK8IP2Q13387 824 aaPredicted RBP11.26□□□□□ -0.61
SMARCA4-213ENST00000587988 CBX2Q14781 532 aaPredicted RBP11.26□□□□□ -0.61
SMARCA4-213ENST00000587988 TEAD2Q15562 447 aa11.26□□□□□ -0.61
SMARCA4-213ENST00000587988 TSR1Q2NL82 804 aaKnown RBP11.26□□□□□ -0.61
SMARCA4-213ENST00000587988 ASTE1Q2TB18 679 aaPredicted RBP11.26□□□□□ -0.61
SMARCA4-213ENST00000587988 PM20D1Q6GTS8 502 aa11.26□□□□□ -0.61
SMARCA4-213ENST00000587988 PTCRAQ6ISU1 281 aaPredicted RBP11.26□□□□□ -0.61
SMARCA4-213ENST00000587988 TRIM72Q6ZMU5 477 aa11.26□□□□□ -0.61
SMARCA4-213ENST00000587988 HFE2Q6ZVN8 426 aa11.26□□□□□ -0.61
SMARCA4-213ENST00000587988 GET4Q7L5D6 327 aaPredicted RBP11.26□□□□□ -0.61
SMARCA4-213ENST00000587988 CCDC186Q7Z3E2 898 aa11.26□□□□□ -0.61
SMARCA4-213ENST00000587988 SCD5Q86SK9 330 aa11.26□□□□□ -0.61
SMARCA4-213ENST00000587988 ERICH1Q86X53 443 aa11.26□□□□□ -0.61
SMARCA4-213ENST00000587988 SIX6OS1Q8N1H7 587 aa11.26□□□□□ -0.61
SMARCA4-213ENST00000587988 LEMD2Q8NC56 503 aa11.26□□□□□ -0.61
SMARCA4-213ENST00000587988 PIWIL1Q96J94 861 aaKnown RBP11.26□□□□□ -0.61
SMARCA4-213ENST00000587988 SLITRK1Q96PX8 696 aa11.26□□□□□ -0.61
SMARCA4-213ENST00000587988 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.26□□□□□ -0.61
SMARCA4-213ENST00000587988 NMUR1Q9HB89 426 aa11.26□□□□□ -0.61
SMARCA4-213ENST00000587988 CYLDQ9NQC7 956 aa11.26□□□□□ -0.61
SMARCA4-213ENST00000587988 ZNHIT6Q9NWK9 470 aaKnown RBP11.26□□□□□ -0.61
SMARCA4-213ENST00000587988 OSER1Q9NX31 292 aa11.26□□□□□ -0.61
SMARCA4-213ENST00000587988 EHD2Q9NZN4 543 aa11.26□□□□□ -0.61
SMARCA4-213ENST00000587988 MRPS23Q9Y3D9 190 aaKnown RBP11.26□□□□□ -0.61
SMARCA4-213ENST00000587988 XIRP2A4UGR9 3374 aa11.25□□□□□ -0.61
SMARCA4-213ENST00000587988 A0A1W2PQH9 124 aa11.25□□□□□ -0.61
SMARCA4-213ENST00000587988 C2orf78A6NCI8 922 aa11.25□□□□□ -0.61
SMARCA4-213ENST00000587988 ZNF840PA6NDX5 716 aa11.25□□□□□ -0.61
SMARCA4-213ENST00000587988 YJEFN3A6XGL0 299 aa11.25□□□□□ -0.61
SMARCA4-213ENST00000587988 E7ENQ6 273 aa11.25□□□□□ -0.61
SMARCA4-213ENST00000587988 ZNF197O14709 1029 aa11.25□□□□□ -0.61
SMARCA4-213ENST00000587988 ZBED1O96006 694 aa11.25□□□□□ -0.61
SMARCA4-213ENST00000587988 ABL1P00519 1130 aa11.25□□□□□ -0.61
SMARCA4-213ENST00000587988 ZDHHC11BP0C7U3 371 aa11.25□□□□□ -0.61
SMARCA4-213ENST00000587988 SP100P23497 879 aaPredicted RBP11.25□□□□□ -0.61
SMARCA4-213ENST00000587988 CDC25CP30307 473 aa11.25□□□□□ -0.61
SMARCA4-213ENST00000587988 GABRB2P47870 512 aa11.25□□□□□ -0.61
SMARCA4-213ENST00000587988 MRPS5P82675 430 aaKnown RBP11.25□□□□□ -0.61
SMARCA4-213ENST00000587988 CDK17Q00537 523 aa11.25□□□□□ -0.61
SMARCA4-213ENST00000587988 GFPT1Q06210 699 aaPredicted RBP11.25□□□□□ -0.61
SMARCA4-213ENST00000587988 PTP4A2Q12974 167 aa11.25□□□□□ -0.61
SMARCA4-213ENST00000587988 SMAD2Q15796 467 aaKnown RBP11.25□□□□□ -0.61
SMARCA4-213ENST00000587988 TXNDC8Q6A555 127 aa11.25□□□□□ -0.61
SMARCA4-213ENST00000587988 OR6B2Q6IFH4 312 aa11.25□□□□□ -0.61
SMARCA4-213ENST00000587988 ACAD10Q6JQN1 1059 aa11.25□□□□□ -0.61
SMARCA4-213ENST00000587988 MMS22LQ6ZRQ5 1243 aa11.25□□□□□ -0.61
SMARCA4-213ENST00000587988 FAM183BPQ6ZVS7 135 aa11.25□□□□□ -0.61
SMARCA4-213ENST00000587988 PHLDB2Q86SQ0 1253 aa11.25□□□□□ -0.61
SMARCA4-213ENST00000587988 XYLT1Q86Y38 959 aa11.25□□□□□ -0.61
SMARCA4-213ENST00000587988 PHF13Q86YI8 300 aaPredicted RBP11.25□□□□□ -0.61
SMARCA4-213ENST00000587988 SCML4Q8N228 414 aa11.25□□□□□ -0.61
SMARCA4-213ENST00000587988 OVCA2Q8WZ82 227 aa11.25□□□□□ -0.61
SMARCA4-213ENST00000587988 C18orf8Q96DM3 657 aa11.25□□□□□ -0.61
SMARCA4-213ENST00000587988 ZSWIM3Q96MP5 696 aa11.25□□□□□ -0.61
SMARCA4-213ENST00000587988 NECTIN4Q96NY8 510 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms