RNA–Protein interactions for RNA: ENST00000587259.5

VMP1-204, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-204ENST00000587259 HOXD13P35453 343 aa8.34□□□□□ -1.07
VMP1-204ENST00000587259 EPHB3P54753 998 aa8.34□□□□□ -1.07
VMP1-204ENST00000587259 FCHO2Q0JRZ9 810 aa8.34□□□□□ -1.07
VMP1-204ENST00000587259 BFSP1Q12934 665 aa8.34□□□□□ -1.07
VMP1-204ENST00000587259 PLD1Q13393 1074 aa8.34□□□□□ -1.07
VMP1-204ENST00000587259 CCINQ13939 588 aa8.34□□□□□ -1.07
VMP1-204ENST00000587259 PPP2R5DQ14738 602 aa8.34□□□□□ -1.07
VMP1-204ENST00000587259 SPA17Q15506 151 aa8.34□□□□□ -1.07
VMP1-204ENST00000587259 EXOC3L4Q17RC7 722 aa8.34□□□□□ -1.07
VMP1-204ENST00000587259 ARHGAP29Q52LW3 1261 aa8.34□□□□□ -1.07
VMP1-204ENST00000587259 ZC2HC1CQ53FD0 456 aaPredicted RBP8.34□□□□□ -1.07
VMP1-204ENST00000587259 TCERG1LQ5VWI1 586 aa8.34□□□□□ -1.07
VMP1-204ENST00000587259 SCARA3Q6AZY7 606 aa8.34□□□□□ -1.07
VMP1-204ENST00000587259 SLFN12LQ6IEE8 588 aa8.34□□□□□ -1.07
VMP1-204ENST00000587259 DSTYKQ6XUX3 929 aa8.34□□□□□ -1.07
VMP1-204ENST00000587259 DNAJB7Q7Z6W7 309 aaPredicted RBP8.34□□□□□ -1.07
VMP1-204ENST00000587259 VPS36Q86VN1 386 aa8.34□□□□□ -1.07
VMP1-204ENST00000587259 LONP2Q86WA8 852 aa8.34□□□□□ -1.07
VMP1-204ENST00000587259 TMEM161BQ8NDZ6 487 aa8.34□□□□□ -1.07
VMP1-204ENST00000587259 TTC16Q8NEE8 873 aa8.34□□□□□ -1.07
VMP1-204ENST00000587259 APPL2Q8NEU8 664 aa8.34□□□□□ -1.07
VMP1-204ENST00000587259 BEST2Q8NFU1 509 aa8.34□□□□□ -1.07
VMP1-204ENST00000587259 FAM84AQ96KN4 292 aa8.34□□□□□ -1.07
VMP1-204ENST00000587259 SEPT5Q99719 369 aaPredicted RBP8.34□□□□□ -1.07
VMP1-204ENST00000587259 DEF6Q9H4E7 631 aa8.34□□□□□ -1.07
VMP1-204ENST00000587259 FBRSL1Q9HCM7 1045 aaKnown RBP8.34□□□□□ -1.07
VMP1-204ENST00000587259 TRPV5Q9NQA5 729 aa8.34□□□□□ -1.07
VMP1-204ENST00000587259 FAM207AQ9NSI2 230 aaPredicted RBP8.34□□□□□ -1.07
VMP1-204ENST00000587259 TBX20Q9UMR3 447 aa8.34□□□□□ -1.07
VMP1-204ENST00000587259 CCL26Q9Y258 94 aa8.34□□□□□ -1.07
VMP1-204ENST00000587259 INVSQ9Y283 1065 aa8.34□□□□□ -1.07
VMP1-204ENST00000587259 RALGAPA1Q6GYQ0 2036 aa8.34□□□□□ -1.07
VMP1-204ENST00000587259 TISP43B9A030 160 aa8.33□□□□□ -1.08
VMP1-204ENST00000587259 M0QZQ0 153 aa8.33□□□□□ -1.08
VMP1-204ENST00000587259 TULP1O00294 542 aaPredicted RBP8.33□□□□□ -1.08
VMP1-204ENST00000587259 GIPC1O14908 333 aa8.33□□□□□ -1.08
VMP1-204ENST00000587259 HNRNPDLO14979 420 aaKnown RBP8.33□□□□□ -1.08
VMP1-204ENST00000587259 PMM2O15305 246 aa8.33□□□□□ -1.08
VMP1-204ENST00000587259 KIF5CO60282 957 aa8.33□□□□□ -1.08
VMP1-204ENST00000587259 OAZ2O95190 189 aa8.33□□□□□ -1.08
VMP1-204ENST00000587259 NDUFA10O95299 355 aa8.33□□□□□ -1.08
VMP1-204ENST00000587259 TOP3BO95985 862 aaKnown RBP8.33□□□□□ -1.08
VMP1-204ENST00000587259 LDHAP00338 332 aaKnown RBP8.33□□□□□ -1.08
VMP1-204ENST00000587259 EGFP01133 1207 aa8.33□□□□□ -1.08
VMP1-204ENST00000587259 NFICP08651 508 aa8.33□□□□□ -1.08
VMP1-204ENST00000587259 ARSAP15289 507 aa8.33□□□□□ -1.08
VMP1-204ENST00000587259 ATF6P18850 670 aa8.33□□□□□ -1.08
VMP1-204ENST00000587259 GTF2H1P32780 548 aa8.33□□□□□ -1.08
VMP1-204ENST00000587259 GPR15P49685 360 aa8.33□□□□□ -1.08
VMP1-204ENST00000587259 CYP2J2P51589 502 aa8.33□□□□□ -1.08
VMP1-204ENST00000587259 ETF1P62495 437 aaKnown RBP8.33□□□□□ -1.08
VMP1-204ENST00000587259 TUBB2AQ13885 445 aa8.33□□□□□ -1.08
VMP1-204ENST00000587259 LRRC32Q14392 662 aa8.33□□□□□ -1.08
VMP1-204ENST00000587259 ENOX2Q16206 610 aaKnown RBP8.33□□□□□ -1.08
VMP1-204ENST00000587259 CCDC142Q17RM4 750 aa8.33□□□□□ -1.08
VMP1-204ENST00000587259 SLC39A12Q504Y0 691 aa8.33□□□□□ -1.08
VMP1-204ENST00000587259 SFMBT2Q5VUG0 894 aa8.33□□□□□ -1.08
VMP1-204ENST00000587259 SDHAF4Q5VUM1 108 aa8.33□□□□□ -1.08
VMP1-204ENST00000587259 OVOS1Q6IE37 1185 aa8.33□□□□□ -1.08
VMP1-204ENST00000587259 JADE1Q6IE81 842 aa8.33□□□□□ -1.08
VMP1-204ENST00000587259 FSTL4Q6MZW2 842 aa8.33□□□□□ -1.08
VMP1-204ENST00000587259 APBB1IPQ7Z5R6 666 aaPredicted RBP8.33□□□□□ -1.08
VMP1-204ENST00000587259 SLC35C1Q96A29 364 aa8.33□□□□□ -1.08
VMP1-204ENST00000587259 BICD1Q96G01 975 aa8.33□□□□□ -1.08
VMP1-204ENST00000587259 EEF2KMTQ96G04 330 aa8.33□□□□□ -1.08
VMP1-204ENST00000587259 BORCS6Q96GS4 357 aa8.33□□□□□ -1.08
VMP1-204ENST00000587259 CCDC42Q96M95 316 aa8.33□□□□□ -1.08
VMP1-204ENST00000587259 HHIPQ96QV1 700 aa8.33□□□□□ -1.08
VMP1-204ENST00000587259 TUBB2BQ9BVA1 445 aa8.33□□□□□ -1.08
VMP1-204ENST00000587259 LSM14BQ9BX40 385 aaKnown RBP8.33□□□□□ -1.08
VMP1-204ENST00000587259 SLC46A2Q9BY10 475 aa8.33□□□□□ -1.08
VMP1-204ENST00000587259 EBF3Q9H4W6 596 aa8.33□□□□□ -1.08
VMP1-204ENST00000587259 IL21Q9HBE4 155 aa8.33□□□□□ -1.08
VMP1-204ENST00000587259 GKN1Q9NS71 199 aa8.33□□□□□ -1.08
VMP1-204ENST00000587259 HSPBP1Q9NZL4 362 aa8.33□□□□□ -1.08
VMP1-204ENST00000587259 GCNT4Q9P109 453 aa8.33□□□□□ -1.08
VMP1-204ENST00000587259 ADGRG1Q9Y653 693 aa8.33□□□□□ -1.08
VMP1-204ENST00000587259 EPN1Q9Y6I3 576 aaPredicted RBP8.33□□□□□ -1.08
VMP1-204ENST00000587259 CEP295Q9C0D2 2601 aa8.32□□□□□ -1.08
VMP1-204ENST00000587259 SOWAHDA6NJG2 315 aa8.32□□□□□ -1.08
VMP1-204ENST00000587259 EIF3CLB5ME19 914 aaKnown RBP8.32□□□□□ -1.08
VMP1-204ENST00000587259 CLIC2O15247 247 aa8.32□□□□□ -1.08
VMP1-204ENST00000587259 CLDN3O15551 220 aa8.32□□□□□ -1.08
VMP1-204ENST00000587259 MAP3K7O43318 606 aa8.32□□□□□ -1.08
VMP1-204ENST00000587259 KRT86O43790 486 aa8.32□□□□□ -1.08
VMP1-204ENST00000587259 FAM189A1O60320 539 aa8.32□□□□□ -1.08
VMP1-204ENST00000587259 TOM1L1O75674 476 aa8.32□□□□□ -1.08
VMP1-204ENST00000587259 GFPT2O94808 682 aa8.32□□□□□ -1.08
VMP1-204ENST00000587259 PIGRP01833 764 aa8.32□□□□□ -1.08
VMP1-204ENST00000587259 SERPING1P05155 500 aa8.32□□□□□ -1.08
VMP1-204ENST00000587259 PMLP29590 882 aa8.32□□□□□ -1.08
VMP1-204ENST00000587259 LRPAP1P30533 357 aa8.32□□□□□ -1.08
VMP1-204ENST00000587259 ALDH1A3P47895 512 aa8.32□□□□□ -1.08
VMP1-204ENST00000587259 FMO5P49326 533 aa8.32□□□□□ -1.08
VMP1-204ENST00000587259 AARSP49588 968 aaKnown RBP eCLIP8.32□□□□□ -1.08
VMP1-204ENST00000587259 LIG4P49917 911 aa8.32□□□□□ -1.08
VMP1-204ENST00000587259 VAMP7P51809 220 aa8.32□□□□□ -1.08
VMP1-204ENST00000587259 MCCD1P59942 119 aaPredicted RBP8.32□□□□□ -1.08
VMP1-204ENST00000587259 MYL7Q01449 175 aa8.32□□□□□ -1.08
VMP1-204ENST00000587259 MCL1Q07820 350 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms