RNA–Protein interactions for RNA: ENST00000586502.1

CXXC1-205, Transcript of CXXC finger protein 1, humanhuman

TSL 3

Gene CXXC1, Length 541 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1-205ENST00000586502 HHLA1C9JL84 531 aa17.5■□□□□ 0.39
CXXC1-205ENST00000586502 ZDHHC11BP0C7U3 371 aa17.5■□□□□ 0.39
CXXC1-205ENST00000586502 ANP32AP39687 249 aaKnown RBP17.5■□□□□ 0.39
CXXC1-205ENST00000586502 STX17P56962 302 aa17.5■□□□□ 0.39
CXXC1-205ENST00000586502 CAMK4Q16566 473 aa17.5■□□□□ 0.39
CXXC1-205ENST00000586502 PPP1R26Q5T8A7 1209 aaPredicted RBP17.5■□□□□ 0.39
CXXC1-205ENST00000586502 SNX30Q5VWJ9 437 aa17.5■□□□□ 0.39
CXXC1-205ENST00000586502 FOXR2Q6PJQ5 311 aa17.5■□□□□ 0.39
CXXC1-205ENST00000586502 ZC3H14Q6PJT7 736 aaKnown RBP17.5■□□□□ 0.39
CXXC1-205ENST00000586502 TTC39CQ8N584 583 aa17.5■□□□□ 0.39
CXXC1-205ENST00000586502 SLC4A11Q8NBS3 891 aa17.5■□□□□ 0.39
CXXC1-205ENST00000586502 ATP2A3Q93084 1043 aa17.5■□□□□ 0.39
CXXC1-205ENST00000586502 JAKMIP2Q96AA8 810 aa17.5■□□□□ 0.39
CXXC1-205ENST00000586502 DNAI2Q9GZS0 605 aa17.5■□□□□ 0.39
CXXC1-205ENST00000586502 LINC00597Q9H2U6 94 aa17.5■□□□□ 0.39
CXXC1-205ENST00000586502 TRDMT1O14717 391 aaKnown RBP17.49■□□□□ 0.39
CXXC1-205ENST00000586502 COCHO43405 550 aa17.49■□□□□ 0.39
CXXC1-205ENST00000586502 MBL2P11226 248 aaPredicted RBP17.49■□□□□ 0.39
CXXC1-205ENST00000586502 GJA4P35212 333 aa17.49■□□□□ 0.39
CXXC1-205ENST00000586502 FMO5P49326 533 aa17.49■□□□□ 0.39
CXXC1-205ENST00000586502 PGFP49763 221 aa17.49■□□□□ 0.39
CXXC1-205ENST00000586502 RAD23BP54727 409 aa17.49■□□□□ 0.39
CXXC1-205ENST00000586502 AMPD2Q01433 879 aa17.49■□□□□ 0.39
CXXC1-205ENST00000586502 PAK1Q13153 545 aa17.49■□□□□ 0.39
CXXC1-205ENST00000586502 CUL2Q13617 745 aa17.49■□□□□ 0.39
CXXC1-205ENST00000586502 TMEM196Q5HYL7 178 aa17.49■□□□□ 0.39
CXXC1-205ENST00000586502 HECTD3Q5T447 861 aa17.49■□□□□ 0.39
CXXC1-205ENST00000586502 NAIF1Q69YI7 327 aaPredicted RBP17.49■□□□□ 0.39
CXXC1-205ENST00000586502 FSTL4Q6MZW2 842 aa17.49■□□□□ 0.39
CXXC1-205ENST00000586502 SPEM1Q8N4L4 309 aa17.49■□□□□ 0.39
CXXC1-205ENST00000586502 TMEM176AQ96HP8 235 aa17.49■□□□□ 0.39
CXXC1-205ENST00000586502 HEXIM2Q96MH2 286 aaKnown RBP17.49■□□□□ 0.39
CXXC1-205ENST00000586502 FBXO44Q9H4M3 255 aa17.49■□□□□ 0.39
CXXC1-205ENST00000586502 CCSER2Q9H7U1 834 aa17.49■□□□□ 0.39
CXXC1-205ENST00000586502 KIAA1468Q9P260 1216 aa17.49■□□□□ 0.39
CXXC1-205ENST00000586502 CFAP97Q9P2B7 532 aa17.49■□□□□ 0.39
CXXC1-205ENST00000586502 SCAMP3O14828 347 aaKnown RBP17.48■□□□□ 0.39
CXXC1-205ENST00000586502 TDGF1P13385 188 aa17.48■□□□□ 0.39
CXXC1-205ENST00000586502 ACO1P21399 889 aaKnown RBP17.48■□□□□ 0.39
CXXC1-205ENST00000586502 TUBP50607 506 aa17.48■□□□□ 0.39
CXXC1-205ENST00000586502 CCR3P51677 355 aa17.48■□□□□ 0.39
CXXC1-205ENST00000586502 SATB1Q01826 763 aa17.48■□□□□ 0.39
CXXC1-205ENST00000586502 GRSF1Q12849 480 aaKnown RBP eCLIP17.48■□□□□ 0.39
CXXC1-205ENST00000586502 LRMPQ12912 555 aa17.48■□□□□ 0.39
CXXC1-205ENST00000586502 SYNPOQ8N3V7 929 aa17.48■□□□□ 0.39
CXXC1-205ENST00000586502 TRIML1Q8N9V2 468 aa17.48■□□□□ 0.39
CXXC1-205ENST00000586502 NELL1Q92832 810 aa17.48■□□□□ 0.39
CXXC1-205ENST00000586502 ZFRQ96KR1 1074 aaKnown RBP17.48■□□□□ 0.39
CXXC1-205ENST00000586502 DUSP16Q9BY84 665 aa17.48■□□□□ 0.39
CXXC1-205ENST00000586502 SEMA4AQ9H3S1 761 aa17.48■□□□□ 0.39
CXXC1-205ENST00000586502 FAM124BQ9H5Z6 455 aaPredicted RBP17.48■□□□□ 0.39
CXXC1-205ENST00000586502 FBRSL1Q9HCM7 1045 aaKnown RBP17.48■□□□□ 0.39
CXXC1-205ENST00000586502 PNPLA8Q9NP80 782 aa17.48■□□□□ 0.39
CXXC1-205ENST00000586502 PCDHGA2Q9Y5H1 932 aa17.48■□□□□ 0.39
CXXC1-205ENST00000586502 ANAPC1Q9H1A4 1944 aa17.48■□□□□ 0.39
CXXC1-205ENST00000586502 CYP26A1O43174 497 aa17.47■□□□□ 0.39
CXXC1-205ENST00000586502 NFATC1O95644 943 aa17.47■□□□□ 0.39
CXXC1-205ENST00000586502 LMNAP02545 664 aaKnown RBP17.47■□□□□ 0.39
CXXC1-205ENST00000586502 CXCL12P48061 93 aa17.47■□□□□ 0.39
CXXC1-205ENST00000586502 GALK1P51570 392 aa17.47■□□□□ 0.39
CXXC1-205ENST00000586502 DDX42Q86XP3 938 aaKnown RBP eCLIP17.47■□□□□ 0.39
CXXC1-205ENST00000586502 KIAA1958Q8N8K9 716 aa17.47■□□□□ 0.39
CXXC1-205ENST00000586502 ZBTB44Q8NCP5 570 aa17.47■□□□□ 0.39
CXXC1-205ENST00000586502 P2RY13Q9BPV8 354 aa17.47■□□□□ 0.39
CXXC1-205ENST00000586502 C2orf42Q9NWW7 574 aa17.47■□□□□ 0.39
CXXC1-205ENST00000586502 ZSCAN32Q9NX65 697 aa17.47■□□□□ 0.39
CXXC1-205ENST00000586502 SCML2Q9UQR0 700 aa17.47■□□□□ 0.39
CXXC1-205ENST00000586502 CACNA1IQ9P0X4 2223 aa17.47■□□□□ 0.39
CXXC1-205ENST00000586502 PMM2O15305 246 aa17.46■□□□□ 0.39
CXXC1-205ENST00000586502 TLR5O60602 858 aa17.46■□□□□ 0.39
CXXC1-205ENST00000586502 EGFP01133 1207 aa17.46■□□□□ 0.39
CXXC1-205ENST00000586502 KIF11P52732 1056 aa17.46■□□□□ 0.39
CXXC1-205ENST00000586502 NR1H3Q13133 447 aa17.46■□□□□ 0.39
CXXC1-205ENST00000586502 PPP2R5DQ14738 602 aa17.46■□□□□ 0.39
CXXC1-205ENST00000586502 ARHGAP17Q68EM7 881 aa17.46■□□□□ 0.39
CXXC1-205ENST00000586502 TRIM59Q8IWR1 403 aa17.46■□□□□ 0.39
CXXC1-205ENST00000586502 UBR7Q8N806 425 aa17.46■□□□□ 0.39
CXXC1-205ENST00000586502 ATRIPQ8WXE1 791 aa17.46■□□□□ 0.39
CXXC1-205ENST00000586502 SRRTQ9BXP5 876 aaKnown RBP17.46■□□□□ 0.39
CXXC1-205ENST00000586502 FAM126AQ9BYI3 521 aaPredicted RBP17.46■□□□□ 0.39
CXXC1-205ENST00000586502 NACA2Q9H009 215 aa17.46■□□□□ 0.39
CXXC1-205ENST00000586502 TLR8Q9NR97 1041 aaKnown RBP17.46■□□□□ 0.39
CXXC1-205ENST00000586502 OSER1Q9NX31 292 aa17.46■□□□□ 0.39
CXXC1-205ENST00000586502 SLC9A3R1O14745 358 aaPredicted RBP17.45■□□□□ 0.38
CXXC1-205ENST00000586502 GNA14O95837 355 aa17.45■□□□□ 0.38
CXXC1-205ENST00000586502 CYP17A1P05093 508 aa17.45■□□□□ 0.38
CXXC1-205ENST00000586502 DRD1P21728 446 aa17.45■□□□□ 0.38
CXXC1-205ENST00000586502 TBXAS1P24557 533 aaPredicted RBP17.45■□□□□ 0.38
CXXC1-205ENST00000586502 MARSP56192 900 aaKnown RBP17.45■□□□□ 0.38
CXXC1-205ENST00000586502 YWHAEP62258 255 aaKnown RBP17.45■□□□□ 0.38
CXXC1-205ENST00000586502 PKN3Q6P5Z2 889 aa17.45■□□□□ 0.38
CXXC1-205ENST00000586502 ADGRG2Q8IZP9 1017 aa17.45■□□□□ 0.38
CXXC1-205ENST00000586502 LMO3Q8TAP4 145 aa17.45■□□□□ 0.38
CXXC1-205ENST00000586502 CD101Q93033 1021 aa17.45■□□□□ 0.38
CXXC1-205ENST00000586502 NT5C1BQ96P26 610 aa17.45■□□□□ 0.38
CXXC1-205ENST00000586502 NMUR1Q9HB89 426 aa17.45■□□□□ 0.38
CXXC1-205ENST00000586502 CYLDQ9NQC7 956 aa17.45■□□□□ 0.38
CXXC1-205ENST00000586502 ZNF638Q14966 1978 aaKnown RBP17.44■□□□□ 0.38
CXXC1-205ENST00000586502 WDR87Q6ZQQ6 2873 aa17.44■□□□□ 0.38
CXXC1-205ENST00000586502 FRYLO94915 3013 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms