RNA–Protein interactions for RNA: ENST00000586080.1

R3HDM4-202, Transcript of R3H domain containing 4, humanhuman

TSL 4

Gene R3HDM4, Length 537 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM4-202ENST00000586080 LEFTY2O00292 366 aa22.87■■□□□ 1.25
R3HDM4-202ENST00000586080 PES1O00541 588 aaKnown RBP22.87■■□□□ 1.25
R3HDM4-202ENST00000586080 COCHO43405 550 aa22.87■■□□□ 1.25
R3HDM4-202ENST00000586080 VDRP11473 427 aa22.87■■□□□ 1.25
R3HDM4-202ENST00000586080 PRKCSHP14314 528 aaPredicted RBP22.87■■□□□ 1.25
R3HDM4-202ENST00000586080 GLULP15104 373 aa22.87■■□□□ 1.25
R3HDM4-202ENST00000586080 SLC7A9P82251 487 aa22.87■■□□□ 1.25
R3HDM4-202ENST00000586080 GCNT1Q02742 428 aa22.87■■□□□ 1.25
R3HDM4-202ENST00000586080 PDGFRLQ15198 375 aa22.87■■□□□ 1.25
R3HDM4-202ENST00000586080 MAN2A1Q16706 1144 aa22.87■■□□□ 1.25
R3HDM4-202ENST00000586080 GBP6Q6ZN66 633 aa22.87■■□□□ 1.25
R3HDM4-202ENST00000586080 TTC30AQ86WT1 665 aa22.87■■□□□ 1.25
R3HDM4-202ENST00000586080 ANKRD52Q8NB46 1076 aa22.87■■□□□ 1.25
R3HDM4-202ENST00000586080 MSANTD3Q96H12 275 aa22.87■■□□□ 1.25
R3HDM4-202ENST00000586080 NELL2Q99435 816 aa22.87■■□□□ 1.25
R3HDM4-202ENST00000586080 FAM83CQ9BQN1 747 aa22.87■■□□□ 1.25
R3HDM4-202ENST00000586080 UBE2TQ9NPD8 197 aaPredicted RBP22.87■■□□□ 1.25
R3HDM4-202ENST00000586080 HPS4Q9NQG7 708 aa22.87■■□□□ 1.25
R3HDM4-202ENST00000586080 SCML2Q9UQR0 700 aa22.87■■□□□ 1.25
R3HDM4-202ENST00000586080 OBSL1O75147 1896 aa22.86■■□□□ 1.25
R3HDM4-202ENST00000586080 SHISA7A6NL88 538 aa22.86■■□□□ 1.25
R3HDM4-202ENST00000586080 H0Y858 1186 aa22.86■■□□□ 1.25
R3HDM4-202ENST00000586080 NCAM2O15394 837 aa22.86■■□□□ 1.25
R3HDM4-202ENST00000586080 OLFM2O95897 454 aa22.86■■□□□ 1.25
R3HDM4-202ENST00000586080 PAEPP09466 180 aa22.86■■□□□ 1.25
R3HDM4-202ENST00000586080 KRT5P13647 590 aa22.86■■□□□ 1.25
R3HDM4-202ENST00000586080 CTHP32929 405 aa22.86■■□□□ 1.25
R3HDM4-202ENST00000586080 BCAT1P54687 386 aa22.86■■□□□ 1.25
R3HDM4-202ENST00000586080 RUNX3Q13761 415 aa22.86■■□□□ 1.25
R3HDM4-202ENST00000586080 EXOC3L4Q17RC7 722 aa22.86■■□□□ 1.25
R3HDM4-202ENST00000586080 CT47A1Q5JQC4 288 aaPredicted RBP22.86■■□□□ 1.25
R3HDM4-202ENST00000586080 OSCP1Q8WVF1 389 aa22.86■■□□□ 1.25
R3HDM4-202ENST00000586080 KREMEN1Q96MU8 473 aa22.86■■□□□ 1.25
R3HDM4-202ENST00000586080 OSBPL6Q9BZF3 934 aa22.86■■□□□ 1.25
R3HDM4-202ENST00000586080 NFE2L3Q9Y4A8 694 aa22.86■■□□□ 1.25
R3HDM4-202ENST00000586080 GREB1Q4ZG55 1949 aa22.85■■□□□ 1.25
R3HDM4-202ENST00000586080 KCNJ18B7U540 433 aa22.85■■□□□ 1.25
R3HDM4-202ENST00000586080 SCAMP3O14828 347 aaKnown RBP22.85■■□□□ 1.25
R3HDM4-202ENST00000586080 TLR5O60602 858 aa22.85■■□□□ 1.25
R3HDM4-202ENST00000586080 ZDHHC11BP0C7U3 371 aa22.85■■□□□ 1.25
R3HDM4-202ENST00000586080 SLC9A1P19634 815 aa22.85■■□□□ 1.25
R3HDM4-202ENST00000586080 BRD2P25440 801 aaKnown RBP22.85■■□□□ 1.25
R3HDM4-202ENST00000586080 PGFP49763 221 aa22.85■■□□□ 1.25
R3HDM4-202ENST00000586080 TUBP50607 506 aa22.85■■□□□ 1.25
R3HDM4-202ENST00000586080 KIF11P52732 1056 aa22.85■■□□□ 1.25
R3HDM4-202ENST00000586080 ZXDBP98169 803 aa22.85■■□□□ 1.25
R3HDM4-202ENST00000586080 KCNJ12Q14500 433 aa22.85■■□□□ 1.25
R3HDM4-202ENST00000586080 GJB7Q6PEY0 223 aa22.85■■□□□ 1.25
R3HDM4-202ENST00000586080 TRIM65Q6PJ69 517 aa22.85■■□□□ 1.25
R3HDM4-202ENST00000586080 PIGZQ86VD9 579 aa22.85■■□□□ 1.25
R3HDM4-202ENST00000586080 RALGPS2Q86X27 583 aaPredicted RBP22.85■■□□□ 1.25
R3HDM4-202ENST00000586080 CPA6Q8N4T0 437 aa22.85■■□□□ 1.25
R3HDM4-202ENST00000586080 UBA3Q8TBC4 463 aa22.85■■□□□ 1.25
R3HDM4-202ENST00000586080 TUBGCP2Q9BSJ2 902 aa22.85■■□□□ 1.25
R3HDM4-202ENST00000586080 SAMSN1Q9NSI8 373 aaKnown RBP22.85■■□□□ 1.25
R3HDM4-202ENST00000586080 ANO10Q9NW15 660 aa22.85■■□□□ 1.25
R3HDM4-202ENST00000586080 DLGAP2Q9P1A6 1054 aa22.85■■□□□ 1.25
R3HDM4-202ENST00000586080 CFAP97Q9P2B7 532 aa22.85■■□□□ 1.25
R3HDM4-202ENST00000586080 KIAA1257Q9ULG3 409 aa22.85■■□□□ 1.25
R3HDM4-202ENST00000586080 TICRRQ7Z2Z1 1910 aa22.84■■□□□ 1.25
R3HDM4-202ENST00000586080 A0A1W2PQH9 124 aa22.84■■□□□ 1.25
R3HDM4-202ENST00000586080 RNF225M0QZC1 329 aaPredicted RBP22.84■■□□□ 1.25
R3HDM4-202ENST00000586080 O00370 1275 aa22.84■■□□□ 1.25
R3HDM4-202ENST00000586080 CALCAP01258 141 aa22.84■■□□□ 1.25
R3HDM4-202ENST00000586080 TCF3P15923 654 aa22.84■■□□□ 1.25
R3HDM4-202ENST00000586080 PLA2G5P39877 138 aa22.84■■□□□ 1.25
R3HDM4-202ENST00000586080 NHLH1Q02575 133 aa22.84■■□□□ 1.25
R3HDM4-202ENST00000586080 PDE4CQ08493 712 aa22.84■■□□□ 1.25
R3HDM4-202ENST00000586080 BST2Q10589 180 aaKnown RBP22.84■■□□□ 1.25
R3HDM4-202ENST00000586080 STX1AQ16623 288 aa22.84■■□□□ 1.25
R3HDM4-202ENST00000586080 SNX30Q5VWJ9 437 aa22.84■■□□□ 1.25
R3HDM4-202ENST00000586080 C1orf228Q6PIY5 440 aa22.84■■□□□ 1.25
R3HDM4-202ENST00000586080 TXNDC11Q6PKC3 985 aa22.84■■□□□ 1.25
R3HDM4-202ENST00000586080 DDX42Q86XP3 938 aaKnown RBP eCLIP22.84■■□□□ 1.25
R3HDM4-202ENST00000586080 TFAP2BQ92481 460 aa22.84■■□□□ 1.25
R3HDM4-202ENST00000586080 ATOH1Q92858 354 aaPredicted RBP22.84■■□□□ 1.25
R3HDM4-202ENST00000586080 ATP2A3Q93084 1043 aa22.84■■□□□ 1.25
R3HDM4-202ENST00000586080 FAM86C1Q9NVL1 165 aa22.84■■□□□ 1.25
R3HDM4-202ENST00000586080 SPATA6Q9NWH7 488 aaPredicted RBP22.84■■□□□ 1.25
R3HDM4-202ENST00000586080 NAGPAQ9UK23 515 aa22.84■■□□□ 1.25
R3HDM4-202ENST00000586080 COL4A2P08572 1712 aa22.83■■□□□ 1.25
R3HDM4-202ENST00000586080 M0QYV0 167 aa22.83■■□□□ 1.25
R3HDM4-202ENST00000586080 TULP2O00295 520 aa22.83■■□□□ 1.25
R3HDM4-202ENST00000586080 XPO1O14980 1071 aaKnown RBP22.83■■□□□ 1.25
R3HDM4-202ENST00000586080 IRF1P10914 325 aa22.83■■□□□ 1.25
R3HDM4-202ENST00000586080 MFAP3P55082 362 aa22.83■■□□□ 1.25
R3HDM4-202ENST00000586080 MLLT6P55198 1093 aaPredicted RBP22.83■■□□□ 1.25
R3HDM4-202ENST00000586080 APBA1Q02410 837 aa22.83■■□□□ 1.25
R3HDM4-202ENST00000586080 PON2Q15165 354 aa22.83■■□□□ 1.25
R3HDM4-202ENST00000586080 ANGPT1Q15389 498 aa22.83■■□□□ 1.25
R3HDM4-202ENST00000586080 ARHGAP44Q17R89 818 aa22.83■■□□□ 1.25
R3HDM4-202ENST00000586080 VWA3BQ502W6 1294 aa22.83■■□□□ 1.25
R3HDM4-202ENST00000586080 C11orf57Q6ZUT1 292 aaPredicted RBP22.83■■□□□ 1.25
R3HDM4-202ENST00000586080 ENOX1Q8TC92 643 aaKnown RBP22.83■■□□□ 1.25
R3HDM4-202ENST00000586080 NDST4Q9H3R1 872 aa22.83■■□□□ 1.25
R3HDM4-202ENST00000586080 NMUR1Q9HB89 426 aa22.83■■□□□ 1.25
R3HDM4-202ENST00000586080 LRRC4Q9HBW1 653 aa22.83■■□□□ 1.25
R3HDM4-202ENST00000586080 APEX2Q9UBZ4 518 aa22.83■■□□□ 1.25
R3HDM4-202ENST00000586080 WDFY4Q6ZS81 3184 aa22.83■■□□□ 1.25
R3HDM4-202ENST00000586080 DENND4CQ5VZ89 1909 aa22.82■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms