RNA–Protein interactions for RNA: ENST00000585437.1

ATG4D-202, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 377 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-202ENST00000585437 ARHGAP26Q9UNA1 814 aa9.14□□□□□ -0.95
ATG4D-202ENST00000585437 PIAS3Q9Y6X2 628 aa9.14□□□□□ -0.95
ATG4D-202ENST00000585437 TRAV19A0A0A6YYK7 116 aa9.13□□□□□ -0.95
ATG4D-202ENST00000585437 DPYSL4O14531 572 aa9.13□□□□□ -0.95
ATG4D-202ENST00000585437 AP5Z1O43299 807 aa9.13□□□□□ -0.95
ATG4D-202ENST00000585437 CKMP06732 381 aa9.13□□□□□ -0.95
ATG4D-202ENST00000585437 USP17L7P0C7H9 530 aa9.13□□□□□ -0.95
ATG4D-202ENST00000585437 FAM200BP0CF97 657 aa9.13□□□□□ -0.95
ATG4D-202ENST00000585437 TRIM21P19474 475 aaKnown RBP9.13□□□□□ -0.95
ATG4D-202ENST00000585437 ACO1P21399 889 aaKnown RBP9.13□□□□□ -0.95
ATG4D-202ENST00000585437 TBXAS1P24557 533 aaPredicted RBP9.13□□□□□ -0.95
ATG4D-202ENST00000585437 TARSP26639 723 aaKnown RBP9.13□□□□□ -0.95
ATG4D-202ENST00000585437 YWHAQP27348 245 aa9.13□□□□□ -0.95
ATG4D-202ENST00000585437 MAGEA9P43362 315 aa9.13□□□□□ -0.95
ATG4D-202ENST00000585437 RPS9P46781 194 aaKnown RBP9.13□□□□□ -0.95
ATG4D-202ENST00000585437 SLC7A9P82251 487 aa9.13□□□□□ -0.95
ATG4D-202ENST00000585437 GCNT1Q02742 428 aa9.13□□□□□ -0.95
ATG4D-202ENST00000585437 KCNH2Q12809 1159 aa9.13□□□□□ -0.95
ATG4D-202ENST00000585437 TAF10Q12962 218 aa9.13□□□□□ -0.95
ATG4D-202ENST00000585437 WDR44Q5JSH3 913 aa9.13□□□□□ -0.95
ATG4D-202ENST00000585437 PPP1R26Q5T8A7 1209 aaPredicted RBP9.13□□□□□ -0.95
ATG4D-202ENST00000585437 ARHGAP17Q68EM7 881 aa9.13□□□□□ -0.95
ATG4D-202ENST00000585437 C1orf228Q6PIY5 440 aa9.13□□□□□ -0.95
ATG4D-202ENST00000585437 GPRIN1Q7Z2K8 1008 aa9.13□□□□□ -0.95
ATG4D-202ENST00000585437 ARL14EPQ8N8R7 260 aaPredicted RBP9.13□□□□□ -0.95
ATG4D-202ENST00000585437 DTWD2Q8NBA8 298 aa9.13□□□□□ -0.95
ATG4D-202ENST00000585437 SPC24Q8NBT2 197 aa9.13□□□□□ -0.95
ATG4D-202ENST00000585437 SCAMP5Q8TAC9 235 aa9.13□□□□□ -0.95
ATG4D-202ENST00000585437 TMEM176AQ96HP8 235 aa9.13□□□□□ -0.95
ATG4D-202ENST00000585437 ZFYVE19Q96K21 471 aa9.13□□□□□ -0.95
ATG4D-202ENST00000585437 ZFRQ96KR1 1074 aaKnown RBP9.13□□□□□ -0.95
ATG4D-202ENST00000585437 CNOT6LQ96LI5 555 aaKnown RBP9.13□□□□□ -0.95
ATG4D-202ENST00000585437 SLITRK1Q96PX8 696 aa9.13□□□□□ -0.95
ATG4D-202ENST00000585437 CYP2S1Q96SQ9 504 aa9.13□□□□□ -0.95
ATG4D-202ENST00000585437 NELL2Q99435 816 aa9.13□□□□□ -0.95
ATG4D-202ENST00000585437 MED10Q9BTT4 135 aa9.13□□□□□ -0.95
ATG4D-202ENST00000585437 HPS4Q9NQG7 708 aa9.13□□□□□ -0.95
ATG4D-202ENST00000585437 GTSE1Q9NYZ3 720 aa9.13□□□□□ -0.95
ATG4D-202ENST00000585437 TRPM5Q9NZQ8 1165 aa9.13□□□□□ -0.95
ATG4D-202ENST00000585437 SIT1Q9Y3P8 196 aa9.13□□□□□ -0.95
ATG4D-202ENST00000585437 MTF2Q9Y483 593 aaPredicted RBP9.13□□□□□ -0.95
ATG4D-202ENST00000585437 PIEZO1Q92508 2521 aa9.13□□□□□ -0.95
ATG4D-202ENST00000585437 MAN2B1O00754 1011 aa9.12□□□□□ -0.95
ATG4D-202ENST00000585437 FGFR1OPO95684 399 aaKnown RBP9.12□□□□□ -0.95
ATG4D-202ENST00000585437 AFPP02771 609 aaKnown RBP9.12□□□□□ -0.95
ATG4D-202ENST00000585437 DCNP07585 359 aaKnown RBP9.12□□□□□ -0.95
ATG4D-202ENST00000585437 CD72P21854 359 aa9.12□□□□□ -0.95
ATG4D-202ENST00000585437 ADORA2BP29275 332 aa9.12□□□□□ -0.95
ATG4D-202ENST00000585437 CTHP32929 405 aa9.12□□□□□ -0.95
ATG4D-202ENST00000585437 ZNF132P52740 706 aa9.12□□□□□ -0.95
ATG4D-202ENST00000585437 MAP3K7CLP57077 242 aa9.12□□□□□ -0.95
ATG4D-202ENST00000585437 YWHAEP62258 255 aaKnown RBP9.12□□□□□ -0.95
ATG4D-202ENST00000585437 TNK2Q07912 1038 aa9.12□□□□□ -0.95
ATG4D-202ENST00000585437 MTF1Q14872 753 aa9.12□□□□□ -0.95
ATG4D-202ENST00000585437 ZNF394Q53GI3 561 aa9.12□□□□□ -0.95
ATG4D-202ENST00000585437 RAB41Q5JT25 222 aa9.12□□□□□ -0.95
ATG4D-202ENST00000585437 ZNF852Q6ZMS4 543 aa9.12□□□□□ -0.95
ATG4D-202ENST00000585437 CCDC186Q7Z3E2 898 aa9.12□□□□□ -0.95
ATG4D-202ENST00000585437 RALGPS2Q86X27 583 aaPredicted RBP9.12□□□□□ -0.95
ATG4D-202ENST00000585437 GPIHBP1Q8IV16 184 aa9.12□□□□□ -0.95
ATG4D-202ENST00000585437 YAF2Q8IY57 180 aa9.12□□□□□ -0.95
ATG4D-202ENST00000585437 ENOX1Q8TC92 643 aaKnown RBP9.12□□□□□ -0.95
ATG4D-202ENST00000585437 CSGALNACT1Q8TDX6 532 aa9.12□□□□□ -0.95
ATG4D-202ENST00000585437 FBXO32Q969P5 355 aa9.12□□□□□ -0.95
ATG4D-202ENST00000585437 NT5C1BQ96P26 610 aa9.12□□□□□ -0.95
ATG4D-202ENST00000585437 DUSP16Q9BY84 665 aa9.12□□□□□ -0.95
ATG4D-202ENST00000585437 DNAI2Q9GZS0 605 aa9.12□□□□□ -0.95
ATG4D-202ENST00000585437 RNF38Q9H0F5 515 aa9.12□□□□□ -0.95
ATG4D-202ENST00000585437 FBXO44Q9H4M3 255 aa9.12□□□□□ -0.95
ATG4D-202ENST00000585437 C8orf33Q9H7E9 229 aaPredicted RBP9.12□□□□□ -0.95
ATG4D-202ENST00000585437 TRPC7Q9HCX4 862 aa9.12□□□□□ -0.95
ATG4D-202ENST00000585437 CYLDQ9NQC7 956 aa9.12□□□□□ -0.95
ATG4D-202ENST00000585437 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.12□□□□□ -0.95
ATG4D-202ENST00000585437 CNTN6Q9UQ52 1028 aa9.12□□□□□ -0.95
ATG4D-202ENST00000585437 UTP18Q9Y5J1 556 aaKnown RBP eCLIP9.12□□□□□ -0.95
ATG4D-202ENST00000585437 USP3Q9Y6I4 520 aa9.12□□□□□ -0.95
ATG4D-202ENST00000585437 PLXND1Q9Y4D7 1925 aa9.11□□□□□ -0.95
ATG4D-202ENST00000585437 NYNRINQ9P2P1 1898 aaKnown RBP9.11□□□□□ -0.95
ATG4D-202ENST00000585437 GTPBP10A4D1E9 387 aaKnown RBP9.11□□□□□ -0.95
ATG4D-202ENST00000585437 OTOL1A6NHN0 477 aaPredicted RBP9.11□□□□□ -0.95
ATG4D-202ENST00000585437 SPECC1L-ADORA2AF8WAN1 911 aa9.11□□□□□ -0.95
ATG4D-202ENST00000585437 O00370 1275 aa9.11□□□□□ -0.95
ATG4D-202ENST00000585437 COCHO43405 550 aa9.11□□□□□ -0.95
ATG4D-202ENST00000585437 PAEPP09466 180 aa9.11□□□□□ -0.95
ATG4D-202ENST00000585437 HDCP19113 662 aa9.11□□□□□ -0.95
ATG4D-202ENST00000585437 RFX1P22670 979 aa9.11□□□□□ -0.95
ATG4D-202ENST00000585437 SOX9P48436 509 aa9.11□□□□□ -0.95
ATG4D-202ENST00000585437 PGFP49763 221 aa9.11□□□□□ -0.95
ATG4D-202ENST00000585437 KIF11P52732 1056 aa9.11□□□□□ -0.95
ATG4D-202ENST00000585437 RUNX3Q13761 415 aa9.11□□□□□ -0.95
ATG4D-202ENST00000585437 CCINQ13939 588 aa9.11□□□□□ -0.95
ATG4D-202ENST00000585437 UBXN2BQ14CS0 331 aa9.11□□□□□ -0.95
ATG4D-202ENST00000585437 NCAPHQ15003 741 aa9.11□□□□□ -0.95
ATG4D-202ENST00000585437 PDGFRLQ15198 375 aa9.11□□□□□ -0.95
ATG4D-202ENST00000585437 EML3Q32P44 896 aa9.11□□□□□ -0.95
ATG4D-202ENST00000585437 ITPRIPL2Q3MIP1 535 aa9.11□□□□□ -0.95
ATG4D-202ENST00000585437 PKDCCQ504Y2 493 aa9.11□□□□□ -0.95
ATG4D-202ENST00000585437 SMYD5Q6GMV2 418 aa9.11□□□□□ -0.95
ATG4D-202ENST00000585437 TXNDC11Q6PKC3 985 aa9.11□□□□□ -0.95
ATG4D-202ENST00000585437 MAMSTRQ6ZN01 415 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms