RNA–Protein interactions for RNA: ENST00000585323.5

NEDD4L-210, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4L, Length 381 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-210ENST00000585323 RNF38Q9H0F5 515 aa13.12□□□□□ -0.31
NEDD4L-210ENST00000585323 THG1LQ9NWX6 298 aaKnown RBP13.12□□□□□ -0.31
NEDD4L-210ENST00000585323 CHORDC1Q9UHD1 332 aaPredicted RBP13.12□□□□□ -0.31
NEDD4L-210ENST00000585323 RAPGEFL1Q9UHV5 662 aa13.12□□□□□ -0.31
NEDD4L-210ENST00000585323 SCML2Q9UQR0 700 aa13.12□□□□□ -0.31
NEDD4L-210ENST00000585323 USP3Q9Y6I4 520 aa13.12□□□□□ -0.31
NEDD4L-210ENST00000585323 TICRRQ7Z2Z1 1910 aa13.11□□□□□ -0.31
NEDD4L-210ENST00000585323 ANAPC1Q9H1A4 1944 aa13.11□□□□□ -0.31
NEDD4L-210ENST00000585323 KANSL1LA0AUZ9 987 aa13.11□□□□□ -0.31
NEDD4L-210ENST00000585323 TULP2O00295 520 aa13.11□□□□□ -0.31
NEDD4L-210ENST00000585323 XPO1O14980 1071 aaKnown RBP13.11□□□□□ -0.31
NEDD4L-210ENST00000585323 CYP26A1O43174 497 aa13.11□□□□□ -0.31
NEDD4L-210ENST00000585323 COCHO43405 550 aa13.11□□□□□ -0.31
NEDD4L-210ENST00000585323 PI15O43692 258 aa13.11□□□□□ -0.31
NEDD4L-210ENST00000585323 RFX1P22670 979 aa13.11□□□□□ -0.31
NEDD4L-210ENST00000585323 BRD2P25440 801 aaKnown RBP13.11□□□□□ -0.31
NEDD4L-210ENST00000585323 MFAP3P55082 362 aa13.11□□□□□ -0.31
NEDD4L-210ENST00000585323 PDE4CQ08493 712 aa13.11□□□□□ -0.31
NEDD4L-210ENST00000585323 BST2Q10589 180 aaKnown RBP13.11□□□□□ -0.31
NEDD4L-210ENST00000585323 PKDCCQ504Y2 493 aa13.11□□□□□ -0.31
NEDD4L-210ENST00000585323 RAB41Q5JT25 222 aa13.11□□□□□ -0.31
NEDD4L-210ENST00000585323 LCLAT1Q6UWP7 414 aa13.11□□□□□ -0.31
NEDD4L-210ENST00000585323 CCDC186Q7Z3E2 898 aa13.11□□□□□ -0.31
NEDD4L-210ENST00000585323 PJA1Q8NG27 643 aa13.11□□□□□ -0.31
NEDD4L-210ENST00000585323 SH3RF2Q8TEC5 729 aa13.11□□□□□ -0.31
NEDD4L-210ENST00000585323 FAM81BQ96LP2 452 aa13.11□□□□□ -0.31
NEDD4L-210ENST00000585323 FAM83CQ9BQN1 747 aa13.11□□□□□ -0.31
NEDD4L-210ENST00000585323 FOXQ1Q9C009 403 aa13.11□□□□□ -0.31
NEDD4L-210ENST00000585323 CCSER2Q9H7U1 834 aa13.11□□□□□ -0.31
NEDD4L-210ENST00000585323 FANCLQ9NW38 375 aa13.11□□□□□ -0.31
NEDD4L-210ENST00000585323 TAB2Q9NYJ8 693 aa13.11□□□□□ -0.31
NEDD4L-210ENST00000585323 GTSE1Q9NYZ3 720 aa13.11□□□□□ -0.31
NEDD4L-210ENST00000585323 HESX1Q9UBX0 185 aa13.11□□□□□ -0.31
NEDD4L-210ENST00000585323 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.11□□□□□ -0.31
NEDD4L-210ENST00000585323 PIAS3Q9Y6X2 628 aa13.11□□□□□ -0.31
NEDD4L-210ENST00000585323 HELZP42694 1942 aaKnown RBP13.11□□□□□ -0.31
NEDD4L-210ENST00000585323 BECN2A8MW95 431 aa13.1□□□□□ -0.31
NEDD4L-210ENST00000585323 LEFTY2O00292 366 aa13.1□□□□□ -0.31
NEDD4L-210ENST00000585323 STK25O00506 426 aa13.1□□□□□ -0.31
NEDD4L-210ENST00000585323 CALCAP01258 141 aa13.1□□□□□ -0.31
NEDD4L-210ENST00000585323 SETSIPP0DME0 302 aa13.1□□□□□ -0.31
NEDD4L-210ENST00000585323 KRT5P13647 590 aa13.1□□□□□ -0.31
NEDD4L-210ENST00000585323 GLULP15104 373 aa13.1□□□□□ -0.31
NEDD4L-210ENST00000585323 CD72P21854 359 aa13.1□□□□□ -0.31
NEDD4L-210ENST00000585323 PLA2G4AP47712 749 aa13.1□□□□□ -0.31
NEDD4L-210ENST00000585323 MLLT6P55198 1093 aaPredicted RBP13.1□□□□□ -0.31
NEDD4L-210ENST00000585323 SLC8A3P57103 927 aa13.1□□□□□ -0.31
NEDD4L-210ENST00000585323 TNK2Q07912 1038 aa13.1□□□□□ -0.31
NEDD4L-210ENST00000585323 KCNMA1Q12791 1236 aa13.1□□□□□ -0.31
NEDD4L-210ENST00000585323 NCAPHQ15003 741 aa13.1□□□□□ -0.31
NEDD4L-210ENST00000585323 KRT31Q15323 416 aa13.1□□□□□ -0.31
NEDD4L-210ENST00000585323 STILQ15468 1287 aa13.1□□□□□ -0.31
NEDD4L-210ENST00000585323 CNGA2Q16280 664 aa13.1□□□□□ -0.31
NEDD4L-210ENST00000585323 HECTD3Q5T447 861 aa13.1□□□□□ -0.31
NEDD4L-210ENST00000585323 DPY19L2P1Q6NXN4 242 aa13.1□□□□□ -0.31
NEDD4L-210ENST00000585323 CC2D1AQ6P1N0 951 aaPredicted RBP13.1□□□□□ -0.31
NEDD4L-210ENST00000585323 CCDC105Q8IYK2 499 aa13.1□□□□□ -0.31
NEDD4L-210ENST00000585323 UBA3Q8TBC4 463 aa13.1□□□□□ -0.31
NEDD4L-210ENST00000585323 CSGALNACT1Q8TDX6 532 aa13.1□□□□□ -0.31
NEDD4L-210ENST00000585323 SHC3Q92529 594 aa13.1□□□□□ -0.31
NEDD4L-210ENST00000585323 MSANTD3Q96H12 275 aa13.1□□□□□ -0.31
NEDD4L-210ENST00000585323 ZFRQ96KR1 1074 aaKnown RBP13.1□□□□□ -0.31
NEDD4L-210ENST00000585323 KCNH6Q9H252 994 aa13.1□□□□□ -0.31
NEDD4L-210ENST00000585323 NMUR1Q9HB89 426 aa13.1□□□□□ -0.31
NEDD4L-210ENST00000585323 LTB4R2Q9NPC1 389 aa13.1□□□□□ -0.31
NEDD4L-210ENST00000585323 CYLDQ9NQC7 956 aa13.1□□□□□ -0.31
NEDD4L-210ENST00000585323 HPS4Q9NQG7 708 aa13.1□□□□□ -0.31
NEDD4L-210ENST00000585323 TLR8Q9NR97 1041 aaKnown RBP13.1□□□□□ -0.31
NEDD4L-210ENST00000585323 GKN1Q9NS71 199 aa13.1□□□□□ -0.31
NEDD4L-210ENST00000585323 OSER1Q9NX31 292 aa13.1□□□□□ -0.31
NEDD4L-210ENST00000585323 AJAP1Q9UKB5 411 aaPredicted RBP13.1□□□□□ -0.31
NEDD4L-210ENST00000585323 CPQQ9Y646 472 aa13.1□□□□□ -0.31
NEDD4L-210ENST00000585323 ZNF638Q14966 1978 aaKnown RBP13.1□□□□□ -0.31
NEDD4L-210ENST00000585323 MYO16Q9Y6X6 1858 aa13.1□□□□□ -0.31
NEDD4L-210ENST00000585323 A0A1W2PQH9 124 aa13.09□□□□□ -0.31
NEDD4L-210ENST00000585323 MAN2B1O00754 1011 aa13.09□□□□□ -0.31
NEDD4L-210ENST00000585323 TLR5O60602 858 aa13.09□□□□□ -0.31
NEDD4L-210ENST00000585323 MBL2P11226 248 aaPredicted RBP13.09□□□□□ -0.31
NEDD4L-210ENST00000585323 ZNF18P17022 549 aa13.09□□□□□ -0.31
NEDD4L-210ENST00000585323 PTMSP20962 102 aa13.09□□□□□ -0.31
NEDD4L-210ENST00000585323 TARSP26639 723 aaKnown RBP13.09□□□□□ -0.31
NEDD4L-210ENST00000585323 SOX9P48436 509 aa13.09□□□□□ -0.31
NEDD4L-210ENST00000585323 NUBP1P53384 320 aa13.09□□□□□ -0.31
NEDD4L-210ENST00000585323 PDGFRLQ15198 375 aa13.09□□□□□ -0.31
NEDD4L-210ENST00000585323 ARHGAP44Q17R89 818 aa13.09□□□□□ -0.31
NEDD4L-210ENST00000585323 ANO6Q4KMQ2 910 aa13.09□□□□□ -0.31
NEDD4L-210ENST00000585323 TRIM68Q6AZZ1 485 aa13.09□□□□□ -0.31
NEDD4L-210ENST00000585323 SMYD5Q6GMV2 418 aa13.09□□□□□ -0.31
NEDD4L-210ENST00000585323 ZNF852Q6ZMS4 543 aa13.09□□□□□ -0.31
NEDD4L-210ENST00000585323 SCD5Q86SK9 330 aa13.09□□□□□ -0.31
NEDD4L-210ENST00000585323 ZNF687Q8N1G0 1237 aa13.09□□□□□ -0.31
NEDD4L-210ENST00000585323 OSCP1Q8WVF1 389 aa13.09□□□□□ -0.31
NEDD4L-210ENST00000585323 KCTD13Q8WZ19 329 aa13.09□□□□□ -0.31
NEDD4L-210ENST00000585323 SECISBP2LQ93073 1101 aaKnown RBP13.09□□□□□ -0.31
NEDD4L-210ENST00000585323 BPIFA3Q9BQP9 254 aa13.09□□□□□ -0.31
NEDD4L-210ENST00000585323 FUCA2Q9BTY2 467 aa13.09□□□□□ -0.31
NEDD4L-210ENST00000585323 OSBPL6Q9BZF3 934 aa13.09□□□□□ -0.31
NEDD4L-210ENST00000585323 HSD3B7Q9H2F3 369 aa13.09□□□□□ -0.31
NEDD4L-210ENST00000585323 C8orf33Q9H7E9 229 aaPredicted RBP13.09□□□□□ -0.31
NEDD4L-210ENST00000585323 SMPD4Q9NXE4 827 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 87.5 ms