RNA–Protein interactions for RNA: ENST00000584083.5

SS18-224, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 663 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-224ENST00000584083 AMPD2Q01433 879 aa21.59■■□□□ 1.05
SS18-224ENST00000584083 CSTF1Q05048 431 aaKnown RBP21.59■■□□□ 1.05
SS18-224ENST00000584083 CETN1Q12798 172 aa21.59■■□□□ 1.05
SS18-224ENST00000584083 HECTD3Q5T447 861 aa21.59■■□□□ 1.05
SS18-224ENST00000584083 MAML2Q8IZL2 1156 aaPredicted RBP21.59■■□□□ 1.05
SS18-224ENST00000584083 SLC4A11Q8NBS3 891 aa21.59■■□□□ 1.05
SS18-224ENST00000584083 FAM124BQ9H5Z6 455 aaPredicted RBP21.59■■□□□ 1.05
SS18-224ENST00000584083 RBM12Q9NTZ6 932 aaKnown RBP21.59■■□□□ 1.05
SS18-224ENST00000584083 FBXO4Q9UKT5 387 aa21.59■■□□□ 1.05
SS18-224ENST00000584083 GFRA3O60609 400 aa21.58■■□□□ 1.05
SS18-224ENST00000584083 OLFM2O95897 454 aa21.58■■□□□ 1.05
SS18-224ENST00000584083 ACO1P21399 889 aaKnown RBP21.58■■□□□ 1.05
SS18-224ENST00000584083 ZXDBP98169 803 aa21.58■■□□□ 1.05
SS18-224ENST00000584083 DGKKQ5KSL6 1271 aa21.58■■□□□ 1.05
SS18-224ENST00000584083 GPRIN1Q7Z2K8 1008 aa21.58■■□□□ 1.05
SS18-224ENST00000584083 NKD2Q969F2 451 aaPredicted RBP21.58■■□□□ 1.05
SS18-224ENST00000584083 NT5C1BQ96P26 610 aa21.58■■□□□ 1.05
SS18-224ENST00000584083 IER2Q9BTL4 223 aa21.58■■□□□ 1.05
SS18-224ENST00000584083 DUSP16Q9BY84 665 aa21.58■■□□□ 1.05
SS18-224ENST00000584083 NACA2Q9H009 215 aa21.58■■□□□ 1.05
SS18-224ENST00000584083 LINC00597Q9H2U6 94 aa21.58■■□□□ 1.05
SS18-224ENST00000584083 CLSTN2Q9H4D0 955 aa21.58■■□□□ 1.05
SS18-224ENST00000584083 ECT2Q9H8V3 914 aa21.58■■□□□ 1.05
SS18-224ENST00000584083 TLR8Q9NR97 1041 aaKnown RBP21.58■■□□□ 1.05
SS18-224ENST00000584083 R4GN57 208 aa21.58■■□□□ 1.05
SS18-224ENST00000584083 ATG2BQ96BY7 2078 aa21.57■■□□□ 1.04
SS18-224ENST00000584083 FANCMQ8IYD8 2048 aa21.57■■□□□ 1.04
SS18-224ENST00000584083 FAM92AA1XBS5 289 aa21.57■■□□□ 1.04
SS18-224ENST00000584083 COCHO43405 550 aa21.57■■□□□ 1.04
SS18-224ENST00000584083 CCDC192P0DO97 292 aa21.57■■□□□ 1.04
SS18-224ENST00000584083 TBXAS1P24557 533 aaPredicted RBP21.57■■□□□ 1.04
SS18-224ENST00000584083 NR1H3Q13133 447 aa21.57■■□□□ 1.04
SS18-224ENST00000584083 EML3Q32P44 896 aa21.57■■□□□ 1.04
SS18-224ENST00000584083 SNX30Q5VWJ9 437 aa21.57■■□□□ 1.04
SS18-224ENST00000584083 ZC3H14Q6PJT7 736 aaKnown RBP21.57■■□□□ 1.04
SS18-224ENST00000584083 DDX42Q86XP3 938 aaKnown RBP eCLIP21.57■■□□□ 1.04
SS18-224ENST00000584083 CCSER2Q9H7U1 834 aa21.57■■□□□ 1.04
SS18-224ENST00000584083 CFAP97Q9P2B7 532 aa21.57■■□□□ 1.04
SS18-224ENST00000584083 RWDD2AQ9UIY3 292 aa21.57■■□□□ 1.04
SS18-224ENST00000584083 UTP18Q9Y5J1 556 aaKnown RBP eCLIP21.57■■□□□ 1.04
SS18-224ENST00000584083 HHLA1C9JL84 531 aa21.56■■□□□ 1.04
SS18-224ENST00000584083 PMM2O15305 246 aa21.56■■□□□ 1.04
SS18-224ENST00000584083 NFATC1O95644 943 aa21.56■■□□□ 1.04
SS18-224ENST00000584083 ZDHHC11BP0C7U3 371 aa21.56■■□□□ 1.04
SS18-224ENST00000584083 GJA4P35212 333 aa21.56■■□□□ 1.04
SS18-224ENST00000584083 KCNH2Q12809 1159 aa21.56■■□□□ 1.04
SS18-224ENST00000584083 GRSF1Q12849 480 aaKnown RBP eCLIP21.56■■□□□ 1.04
SS18-224ENST00000584083 ZNF528Q3MIS6 628 aa21.56■■□□□ 1.04
SS18-224ENST00000584083 TSSK4Q6SA08 328 aa21.56■■□□□ 1.04
SS18-224ENST00000584083 CREBRFQ8IUR6 639 aa21.56■■□□□ 1.04
SS18-224ENST00000584083 TRIM59Q8IWR1 403 aa21.56■■□□□ 1.04
SS18-224ENST00000584083 EXOC4Q96A65 974 aa21.56■■□□□ 1.04
SS18-224ENST00000584083 PNPLA8Q9NP80 782 aa21.56■■□□□ 1.04
SS18-224ENST00000584083 SCML2Q9UQR0 700 aa21.56■■□□□ 1.04
SS18-224ENST00000584083 SLC9A3R1O14745 358 aaPredicted RBP21.55■■□□□ 1.04
SS18-224ENST00000584083 SCAMP3O14828 347 aaKnown RBP21.55■■□□□ 1.04
SS18-224ENST00000584083 P4HA2O15460 535 aa21.55■■□□□ 1.04
SS18-224ENST00000584083 AFPP02771 609 aaKnown RBP21.55■■□□□ 1.04
SS18-224ENST00000584083 CD19P15391 556 aa21.55■■□□□ 1.04
SS18-224ENST00000584083 TUBP50607 506 aa21.55■■□□□ 1.04
SS18-224ENST00000584083 CCR3P51677 355 aa21.55■■□□□ 1.04
SS18-224ENST00000584083 MARSP56192 900 aaKnown RBP21.55■■□□□ 1.04
SS18-224ENST00000584083 PPP2R5DQ14738 602 aa21.55■■□□□ 1.04
SS18-224ENST00000584083 ARHGAP17Q68EM7 881 aa21.55■■□□□ 1.04
SS18-224ENST00000584083 ASCL5Q7RTU5 278 aa21.55■■□□□ 1.04
SS18-224ENST00000584083 PPM1KQ8N3J5 372 aa21.55■■□□□ 1.04
SS18-224ENST00000584083 MLKLQ8NB16 471 aa21.55■■□□□ 1.04
SS18-224ENST00000584083 ZFHX2Q9C0A1 2572 aaPredicted RBP21.55■■□□□ 1.04
SS18-224ENST00000584083 MYOFQ9NZM1 2061 aa21.54■■□□□ 1.04
SS18-224ENST00000584083 TRDMT1O14717 391 aaKnown RBP21.54■■□□□ 1.04
SS18-224ENST00000584083 CYP26A1O43174 497 aa21.54■■□□□ 1.04
SS18-224ENST00000584083 TLR5O60602 858 aa21.54■■□□□ 1.04
SS18-224ENST00000584083 CXCL12P48061 93 aa21.54■■□□□ 1.04
SS18-224ENST00000584083 PGFP49763 221 aa21.54■■□□□ 1.04
SS18-224ENST00000584083 KIF11P52732 1056 aa21.54■■□□□ 1.04
SS18-224ENST00000584083 SLC8A3P57103 927 aa21.54■■□□□ 1.04
SS18-224ENST00000584083 CCINQ13939 588 aa21.54■■□□□ 1.04
SS18-224ENST00000584083 GAS6Q14393 721 aa21.54■■□□□ 1.04
SS18-224ENST00000584083 SGO2Q562F6 1265 aa21.54■■□□□ 1.04
SS18-224ENST00000584083 TMEM196Q5HYL7 178 aa21.54■■□□□ 1.04
SS18-224ENST00000584083 CLEC17AQ6ZS10 378 aa21.54■■□□□ 1.04
SS18-224ENST00000584083 Q6ZS52 159 aa21.54■■□□□ 1.04
SS18-224ENST00000584083 SPEM1Q8N4L4 309 aa21.54■■□□□ 1.04
SS18-224ENST00000584083 KIAA1958Q8N8K9 716 aa21.54■■□□□ 1.04
SS18-224ENST00000584083 CHFRQ96EP1 664 aa21.54■■□□□ 1.04
SS18-224ENST00000584083 P2RY13Q9BPV8 354 aa21.54■■□□□ 1.04
SS18-224ENST00000584083 NUP62CLQ9H1M0 184 aa21.54■■□□□ 1.04
SS18-224ENST00000584083 SEMA4AQ9H3S1 761 aa21.54■■□□□ 1.04
SS18-224ENST00000584083 PRMT8Q9NR22 394 aaPredicted RBP21.54■■□□□ 1.04
SS18-224ENST00000584083 PRR23AA6NEV1 266 aa21.53■■□□□ 1.04
SS18-224ENST00000584083 GALK1P51570 392 aa21.53■■□□□ 1.04
SS18-224ENST00000584083 GOLGA7BQ2TAP0 167 aa21.53■■□□□ 1.04
SS18-224ENST00000584083 FSTL4Q6MZW2 842 aa21.53■■□□□ 1.04
SS18-224ENST00000584083 MAMSTRQ6ZN01 415 aa21.53■■□□□ 1.04
SS18-224ENST00000584083 SYNPOQ8N3V7 929 aa21.53■■□□□ 1.04
SS18-224ENST00000584083 ANKRD52Q8NB46 1076 aa21.53■■□□□ 1.04
SS18-224ENST00000584083 EHBP1Q8NDI1 1231 aa21.53■■□□□ 1.04
SS18-224ENST00000584083 ATRIPQ8WXE1 791 aa21.53■■□□□ 1.04
SS18-224ENST00000584083 SH3BP1Q9Y3L3 701 aa21.53■■□□□ 1.04
SS18-224ENST00000584083 PCDHB4Q9Y5E5 795 aa21.53■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 122.4 ms