RNA–Protein interactions for RNA: ENST00000583697.1

CDK5RAP3-229, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 852 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-229ENST00000583697 DUSP15Q9H1R2 295 aaPredicted RBP9.24□□□□□ -0.93
CDK5RAP3-229ENST00000583697 LINC00597Q9H2U6 94 aa9.24□□□□□ -0.93
CDK5RAP3-229ENST00000583697 POLMQ9NP87 494 aaPredicted RBP9.24□□□□□ -0.93
CDK5RAP3-229ENST00000583697 POLR3BQ9NW08 1133 aaPredicted RBP9.24□□□□□ -0.93
CDK5RAP3-229ENST00000583697 BCCIPQ9P287 314 aaKnown RBP eCLIP9.24□□□□□ -0.93
CDK5RAP3-229ENST00000583697 SERTAD1Q9UHV2 236 aa9.24□□□□□ -0.93
CDK5RAP3-229ENST00000583697 MMP17Q9ULZ9 603 aa9.24□□□□□ -0.93
CDK5RAP3-229ENST00000583697 RIF1Q5UIP0 2472 aaKnown RBP9.24□□□□□ -0.93
CDK5RAP3-229ENST00000583697 F5P12259 2224 aa9.23□□□□□ -0.93
CDK5RAP3-229ENST00000583697 E2F8A0AVK6 867 aa9.23□□□□□ -0.93
CDK5RAP3-229ENST00000583697 COCHO43405 550 aa9.23□□□□□ -0.93
CDK5RAP3-229ENST00000583697 CALUO43852 315 aaPredicted RBP9.23□□□□□ -0.93
CDK5RAP3-229ENST00000583697 AP1G2O75843 785 aa9.23□□□□□ -0.93
CDK5RAP3-229ENST00000583697 NR3C1P04150 777 aa9.23□□□□□ -0.93
CDK5RAP3-229ENST00000583697 MYL1P05976 194 aa9.23□□□□□ -0.93
CDK5RAP3-229ENST00000583697 SLFN14P0C7P3 912 aa9.23□□□□□ -0.93
CDK5RAP3-229ENST00000583697 IRF1P10914 325 aa9.23□□□□□ -0.93
CDK5RAP3-229ENST00000583697 PFKFB1P16118 471 aa9.23□□□□□ -0.93
CDK5RAP3-229ENST00000583697 TUBP50607 506 aa9.23□□□□□ -0.93
CDK5RAP3-229ENST00000583697 CDH8P55286 799 aa9.23□□□□□ -0.93
CDK5RAP3-229ENST00000583697 DNM1Q05193 864 aaKnown RBP9.23□□□□□ -0.93
CDK5RAP3-229ENST00000583697 GAD2Q05329 585 aa9.23□□□□□ -0.93
CDK5RAP3-229ENST00000583697 GOLGA8FQ08AF8 430 aa9.23□□□□□ -0.93
CDK5RAP3-229ENST00000583697 GOLGA8DPQ0D2H9 430 aa9.23□□□□□ -0.93
CDK5RAP3-229ENST00000583697 CRY1Q16526 586 aa9.23□□□□□ -0.93
CDK5RAP3-229ENST00000583697 KMT5BQ4FZB7 885 aa9.23□□□□□ -0.93
CDK5RAP3-229ENST00000583697 HSF5Q4G112 596 aaPredicted RBP9.23□□□□□ -0.93
CDK5RAP3-229ENST00000583697 PREPLQ4J6C6 727 aaPredicted RBP9.23□□□□□ -0.93
CDK5RAP3-229ENST00000583697 EOGTQ5NDL2 527 aa9.23□□□□□ -0.93
CDK5RAP3-229ENST00000583697 PLA2G2CQ5R387 149 aa9.23□□□□□ -0.93
CDK5RAP3-229ENST00000583697 HECTD3Q5T447 861 aa9.23□□□□□ -0.93
CDK5RAP3-229ENST00000583697 STPG1Q5TH74 334 aa9.23□□□□□ -0.93
CDK5RAP3-229ENST00000583697 RNF43Q68DV7 783 aa9.23□□□□□ -0.93
CDK5RAP3-229ENST00000583697 NUDT18Q6ZVK8 323 aa9.23□□□□□ -0.93
CDK5RAP3-229ENST00000583697 RASSF3Q86WH2 238 aa9.23□□□□□ -0.93
CDK5RAP3-229ENST00000583697 MDGA1Q8NFP4 955 aa9.23□□□□□ -0.93
CDK5RAP3-229ENST00000583697 PARD3BQ8TEW8 1205 aa9.23□□□□□ -0.93
CDK5RAP3-229ENST00000583697 WHAMMQ8TF30 809 aa9.23□□□□□ -0.93
CDK5RAP3-229ENST00000583697 ZNF516Q92618 1163 aa9.23□□□□□ -0.93
CDK5RAP3-229ENST00000583697 OTUB2Q96DC9 234 aa9.23□□□□□ -0.93
CDK5RAP3-229ENST00000583697 KCNK16Q96T55 309 aa9.23□□□□□ -0.93
CDK5RAP3-229ENST00000583697 DNAI2Q9GZS0 605 aa9.23□□□□□ -0.93
CDK5RAP3-229ENST00000583697 SCAND2PQ9GZW5 306 aaPredicted RBP9.23□□□□□ -0.93
CDK5RAP3-229ENST00000583697 RNF38Q9H0F5 515 aa9.23□□□□□ -0.93
CDK5RAP3-229ENST00000583697 GZF1Q9H116 711 aaPredicted RBP9.23□□□□□ -0.93
CDK5RAP3-229ENST00000583697 SMOC1Q9H4F8 434 aa9.23□□□□□ -0.93
CDK5RAP3-229ENST00000583697 ARHGEF4Q9NR80 690 aa9.23□□□□□ -0.93
CDK5RAP3-229ENST00000583697 TMEM30AQ9NV96 361 aa9.23□□□□□ -0.93
CDK5RAP3-229ENST00000583697 FRMD4BQ9Y2L6 1034 aa9.23□□□□□ -0.93
CDK5RAP3-229ENST00000583697 MYH10P35580 1976 aa9.23□□□□□ -0.93
CDK5RAP3-229ENST00000583697 TNRC6BQ9UPQ9 1833 aaKnown RBP9.22□□□□□ -0.93
CDK5RAP3-229ENST00000583697 GOLGA6L4A6NEF3 574 aa9.22□□□□□ -0.93
CDK5RAP3-229ENST00000583697 K7EQS6 105 aa9.22□□□□□ -0.93
CDK5RAP3-229ENST00000583697 PDXKO00764 312 aa9.22□□□□□ -0.93
CDK5RAP3-229ENST00000583697 DCLK1O15075 740 aa9.22□□□□□ -0.93
CDK5RAP3-229ENST00000583697 ACTN4O43707 911 aaKnown RBP9.22□□□□□ -0.93
CDK5RAP3-229ENST00000583697 KAT7O95251 611 aa9.22□□□□□ -0.93
CDK5RAP3-229ENST00000583697 CAVIN2O95810 425 aa9.22□□□□□ -0.93
CDK5RAP3-229ENST00000583697 C4BPAP04003 597 aaKnown RBP9.22□□□□□ -0.93
CDK5RAP3-229ENST00000583697 FAM200BP0CF97 657 aa9.22□□□□□ -0.93
CDK5RAP3-229ENST00000583697 CCDC130P13994 396 aa9.22□□□□□ -0.93
CDK5RAP3-229ENST00000583697 TIE1P35590 1138 aa9.22□□□□□ -0.93
CDK5RAP3-229ENST00000583697 DLG4P78352 724 aa9.22□□□□□ -0.93
CDK5RAP3-229ENST00000583697 CLDN10P78369 228 aa9.22□□□□□ -0.93
CDK5RAP3-229ENST00000583697 STK4Q13043 487 aa9.22□□□□□ -0.93
CDK5RAP3-229ENST00000583697 ORC1Q13415 861 aa9.22□□□□□ -0.93
CDK5RAP3-229ENST00000583697 SGSM1Q2NKQ1 1148 aa9.22□□□□□ -0.93
CDK5RAP3-229ENST00000583697 GAB4Q2WGN9 574 aa9.22□□□□□ -0.93
CDK5RAP3-229ENST00000583697 ANO4Q32M45 955 aa9.22□□□□□ -0.93
CDK5RAP3-229ENST00000583697 ZACNQ401N2 412 aa9.22□□□□□ -0.93
CDK5RAP3-229ENST00000583697 PMS2CLQ68D20 193 aa9.22□□□□□ -0.93
CDK5RAP3-229ENST00000583697 TCEAL6Q6IPX3 200 aa9.22□□□□□ -0.93
CDK5RAP3-229ENST00000583697 CYP2U1Q7Z449 544 aa9.22□□□□□ -0.93
CDK5RAP3-229ENST00000583697 TRMT11Q7Z4G4 463 aaKnown RBP9.22□□□□□ -0.93
CDK5RAP3-229ENST00000583697 ACOT1Q86TX2 421 aa9.22□□□□□ -0.93
CDK5RAP3-229ENST00000583697 C12orf40Q86WS4 652 aa9.22□□□□□ -0.93
CDK5RAP3-229ENST00000583697 SLC9A9Q8IVB4 645 aa9.22□□□□□ -0.93
CDK5RAP3-229ENST00000583697 PGBD3Q8N328 593 aa9.22□□□□□ -0.93
CDK5RAP3-229ENST00000583697 CCDC33Q8N5R6 958 aa9.22□□□□□ -0.93
CDK5RAP3-229ENST00000583697 ALLCQ8N6M5 410 aa9.22□□□□□ -0.93
CDK5RAP3-229ENST00000583697 TXNDC5Q8NBS9 432 aaKnown RBP9.22□□□□□ -0.93
CDK5RAP3-229ENST00000583697 CCDC150Q8NCX0 1101 aa9.22□□□□□ -0.93
CDK5RAP3-229ENST00000583697 PLEKHO2Q8TD55 490 aa9.22□□□□□ -0.93
CDK5RAP3-229ENST00000583697 SLC2A14Q8TDB8 520 aa9.22□□□□□ -0.93
CDK5RAP3-229ENST00000583697 TAF4BQ92750 862 aa9.22□□□□□ -0.93
CDK5RAP3-229ENST00000583697 TCEAL3Q969E4 200 aa9.22□□□□□ -0.93
CDK5RAP3-229ENST00000583697 JAKMIP2Q96AA8 810 aa9.22□□□□□ -0.93
CDK5RAP3-229ENST00000583697 PAGE5Q96GU1 130 aa9.22□□□□□ -0.93
CDK5RAP3-229ENST00000583697 CHAMP1Q96JM3 812 aa9.22□□□□□ -0.93
CDK5RAP3-229ENST00000583697 SPATA32Q96LK8 384 aa9.22□□□□□ -0.93
CDK5RAP3-229ENST00000583697 SDCBP2Q9H190 292 aa9.22□□□□□ -0.93
CDK5RAP3-229ENST00000583697 FBXO44Q9H4M3 255 aa9.22□□□□□ -0.93
CDK5RAP3-229ENST00000583697 TLR8Q9NR97 1041 aaKnown RBP9.22□□□□□ -0.93
CDK5RAP3-229ENST00000583697 RXFP3Q9NSD7 469 aa9.22□□□□□ -0.93
CDK5RAP3-229ENST00000583697 FAM49BQ9NUQ9 324 aa9.22□□□□□ -0.93
CDK5RAP3-229ENST00000583697 COMMD8Q9NX08 183 aa9.22□□□□□ -0.93
CDK5RAP3-229ENST00000583697 GMIPQ9P107 970 aa9.22□□□□□ -0.93
CDK5RAP3-229ENST00000583697 USP25Q9UHP3 1055 aa9.22□□□□□ -0.93
CDK5RAP3-229ENST00000583697 LSM7Q9UK45 103 aaKnown RBP9.22□□□□□ -0.93
CDK5RAP3-229ENST00000583697 RCOR1Q9UKL0 485 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 110.4 ms