RNA–Protein interactions for RNA: ENST00000583438.1

PPP4R1-225, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 4

Gene PPP4R1, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-225ENST00000583438 CCDC142Q17RM4 750 aa8.58□□□□□ -1.04
PPP4R1-225ENST00000583438 PPM1JQ5JR12 505 aa8.58□□□□□ -1.04
PPP4R1-225ENST00000583438 SLC39A4Q6P5W5 647 aa8.58□□□□□ -1.04
PPP4R1-225ENST00000583438 FBXL19Q6PCT2 694 aa8.58□□□□□ -1.04
PPP4R1-225ENST00000583438 C1orf186Q6ZWK4 172 aa8.58□□□□□ -1.04
PPP4R1-225ENST00000583438 TRIM42Q8IWZ5 723 aa8.58□□□□□ -1.04
PPP4R1-225ENST00000583438 IGSF22Q8N9C0 903 aa8.58□□□□□ -1.04
PPP4R1-225ENST00000583438 OR10T2Q8NGX3 314 aa8.58□□□□□ -1.04
PPP4R1-225ENST00000583438 FAM3CQ92520 227 aa8.58□□□□□ -1.04
PPP4R1-225ENST00000583438 EZH1Q92800 747 aaPredicted RBP8.58□□□□□ -1.04
PPP4R1-225ENST00000583438 SMARCD2Q92925 531 aa8.58□□□□□ -1.04
PPP4R1-225ENST00000583438 FAM84AQ96KN4 292 aa8.58□□□□□ -1.04
PPP4R1-225ENST00000583438 C2orf40Q9H1Z8 148 aa8.58□□□□□ -1.04
PPP4R1-225ENST00000583438 BRD9Q9H8M2 597 aa8.58□□□□□ -1.04
PPP4R1-225ENST00000583438 AKTIPQ9H8T0 292 aa8.58□□□□□ -1.04
PPP4R1-225ENST00000583438 ZFP14Q9HCL3 533 aa8.58□□□□□ -1.04
PPP4R1-225ENST00000583438 SEMA4GQ9NTN9 838 aa8.58□□□□□ -1.04
PPP4R1-225ENST00000583438 DDX19AQ9NUU7 478 aaKnown RBP8.58□□□□□ -1.04
PPP4R1-225ENST00000583438 GTSE1Q9NYZ3 720 aa8.58□□□□□ -1.04
PPP4R1-225ENST00000583438 PCDHB6Q9Y5E3 794 aa8.58□□□□□ -1.04
PPP4R1-225ENST00000583438 MYO18AQ92614 2054 aaKnown RBP8.58□□□□□ -1.04
PPP4R1-225ENST00000583438 CACNA1GO43497 2377 aa8.57□□□□□ -1.04
PPP4R1-225ENST00000583438 LOC105378220A0A1B0GUY1 285 aaPredicted RBP8.57□□□□□ -1.04
PPP4R1-225ENST00000583438 TISP43B9A030 160 aa8.57□□□□□ -1.04
PPP4R1-225ENST00000583438 PRRG1O14668 218 aa8.57□□□□□ -1.04
PPP4R1-225ENST00000583438 SLC30A4O14863 429 aa8.57□□□□□ -1.04
PPP4R1-225ENST00000583438 SLC16A4O15374 487 aa8.57□□□□□ -1.04
PPP4R1-225ENST00000583438 EXTL3O43909 919 aa8.57□□□□□ -1.04
PPP4R1-225ENST00000583438 PSMC3P17980 439 aa8.57□□□□□ -1.04
PPP4R1-225ENST00000583438 EIF4A3P38919 411 aaKnown RBP8.57□□□□□ -1.04
PPP4R1-225ENST00000583438 PXNP49023 591 aaPredicted RBP8.57□□□□□ -1.04
PPP4R1-225ENST00000583438 AARSP49588 968 aaKnown RBP eCLIP8.57□□□□□ -1.04
PPP4R1-225ENST00000583438 NRG1Q02297 640 aaPredicted RBP8.57□□□□□ -1.04
PPP4R1-225ENST00000583438 FCHO2Q0JRZ9 810 aa8.57□□□□□ -1.04
PPP4R1-225ENST00000583438 ZBTB6Q15916 424 aa8.57□□□□□ -1.04
PPP4R1-225ENST00000583438 CTXN3Q4LDR2 81 aa8.57□□□□□ -1.04
PPP4R1-225ENST00000583438 TTC38Q5R3I4 469 aa8.57□□□□□ -1.04
PPP4R1-225ENST00000583438 HEATR6Q6AI08 1181 aaKnown RBP8.57□□□□□ -1.04
PPP4R1-225ENST00000583438 RINT1Q6NUQ1 792 aa8.57□□□□□ -1.04
PPP4R1-225ENST00000583438 BNC2Q6ZN30 1099 aaPredicted RBP8.57□□□□□ -1.04
PPP4R1-225ENST00000583438 PRR23CQ6ZRP0 262 aa8.57□□□□□ -1.04
PPP4R1-225ENST00000583438 TMEM150AQ86TG1 271 aa8.57□□□□□ -1.04
PPP4R1-225ENST00000583438 CD163Q86VB7 1156 aa8.57□□□□□ -1.04
PPP4R1-225ENST00000583438 ATAD1Q8NBU5 361 aa8.57□□□□□ -1.04
PPP4R1-225ENST00000583438 TMEM161BQ8NDZ6 487 aa8.57□□□□□ -1.04
PPP4R1-225ENST00000583438 WFDC12Q8WWY7 111 aa8.57□□□□□ -1.04
PPP4R1-225ENST00000583438 CCDC43Q96MW1 224 aaKnown RBP8.57□□□□□ -1.04
PPP4R1-225ENST00000583438 UROC1Q96N76 676 aa8.57□□□□□ -1.04
PPP4R1-225ENST00000583438 KIF2CQ99661 725 aa8.57□□□□□ -1.04
PPP4R1-225ENST00000583438 ADPGKQ9BRR6 497 aa8.57□□□□□ -1.04
PPP4R1-225ENST00000583438 TRMT61BQ9BVS5 477 aaKnown RBP8.57□□□□□ -1.04
PPP4R1-225ENST00000583438 TGIF2Q9GZN2 237 aa8.57□□□□□ -1.04
PPP4R1-225ENST00000583438 MIR1-1HGQ9H1L0 117 aa8.57□□□□□ -1.04
PPP4R1-225ENST00000583438 FBRSL1Q9HCM7 1045 aaKnown RBP8.57□□□□□ -1.04
PPP4R1-225ENST00000583438 TRPV5Q9NQA5 729 aa8.57□□□□□ -1.04
PPP4R1-225ENST00000583438 AFF4Q9UHB7 1163 aaKnown RBP8.57□□□□□ -1.04
PPP4R1-225ENST00000583438 EPB41L3Q9Y2J2 1087 aaPredicted RBP8.57□□□□□ -1.04
PPP4R1-225ENST00000583438 PKD1L2Q7Z442 2459 aa8.56□□□□□ -1.04
PPP4R1-225ENST00000583438 NBEAQ8NFP9 2946 aa8.56□□□□□ -1.04
PPP4R1-225ENST00000583438 TTC26A0AVF1 554 aa8.56□□□□□ -1.04
PPP4R1-225ENST00000583438 MTMR11A4FU01 709 aa8.56□□□□□ -1.04
PPP4R1-225ENST00000583438 C1QTNF9BB2RNN3 333 aa8.56□□□□□ -1.04
PPP4R1-225ENST00000583438 K7ERI5 159 aa8.56□□□□□ -1.04
PPP4R1-225ENST00000583438 M0QZQ0 153 aa8.56□□□□□ -1.04
PPP4R1-225ENST00000583438 SYN3O14994 580 aa8.56□□□□□ -1.04
PPP4R1-225ENST00000583438 LRG1P02750 347 aa8.56□□□□□ -1.04
PPP4R1-225ENST00000583438 XBP1P17861 261 aa8.56□□□□□ -1.04
PPP4R1-225ENST00000583438 ATF6P18850 670 aa8.56□□□□□ -1.04
PPP4R1-225ENST00000583438 CCT6AP40227 531 aaKnown RBP8.56□□□□□ -1.04
PPP4R1-225ENST00000583438 MAGEA9P43362 315 aa8.56□□□□□ -1.04
PPP4R1-225ENST00000583438 CYP4F8P98187 520 aa8.56□□□□□ -1.04
PPP4R1-225ENST00000583438 DUSP4Q13115 394 aa8.56□□□□□ -1.04
PPP4R1-225ENST00000583438 PON2Q15165 354 aa8.56□□□□□ -1.04
PPP4R1-225ENST00000583438 ARSHQ5FYA8 562 aa8.56□□□□□ -1.04
PPP4R1-225ENST00000583438 HP1BP3Q5SSJ5 553 aaPredicted RBP8.56□□□□□ -1.04
PPP4R1-225ENST00000583438 LAIR1Q6GTX8 287 aa8.56□□□□□ -1.04
PPP4R1-225ENST00000583438 TCEAL6Q6IPX3 200 aa8.56□□□□□ -1.04
PPP4R1-225ENST00000583438 PDXDC1Q6P996 788 aa8.56□□□□□ -1.04
PPP4R1-225ENST00000583438 MPZL3Q6UWV2 235 aa8.56□□□□□ -1.04
PPP4R1-225ENST00000583438 PRR23BQ6ZRT6 265 aa8.56□□□□□ -1.04
PPP4R1-225ENST00000583438 PDZD4Q76G19 769 aaPredicted RBP8.56□□□□□ -1.04
PPP4R1-225ENST00000583438 MFSD6LQ8IWD5 586 aa8.56□□□□□ -1.04
PPP4R1-225ENST00000583438 CCDC83Q8IWF9 413 aa8.56□□□□□ -1.04
PPP4R1-225ENST00000583438 GOLM1Q8NBJ4 401 aa8.56□□□□□ -1.04
PPP4R1-225ENST00000583438 TCEAL3Q969E4 200 aa8.56□□□□□ -1.04
PPP4R1-225ENST00000583438 RTKNQ9BST9 563 aa8.56□□□□□ -1.04
PPP4R1-225ENST00000583438 ACBD3Q9H3P7 528 aa8.56□□□□□ -1.04
PPP4R1-225ENST00000583438 HPS4Q9NQG7 708 aa8.56□□□□□ -1.04
PPP4R1-225ENST00000583438 RAD18Q9NS91 495 aa8.56□□□□□ -1.04
PPP4R1-225ENST00000583438 ANKFY1Q9P2R3 1169 aa8.56□□□□□ -1.04
PPP4R1-225ENST00000583438 CCL26Q9Y258 94 aa8.56□□□□□ -1.04
PPP4R1-225ENST00000583438 FAM208BQ5VWN6 2430 aa8.56□□□□□ -1.04
PPP4R1-225ENST00000583438 LAMA5O15230 3695 aa8.56□□□□□ -1.04
PPP4R1-225ENST00000583438 ITPR1Q14643 2758 aa8.56□□□□□ -1.04
PPP4R1-225ENST00000583438 CACNA1EQ15878 2313 aa8.55□□□□□ -1.04
PPP4R1-225ENST00000583438 DMXL2Q8TDJ6 3036 aa8.55□□□□□ -1.04
PPP4R1-225ENST00000583438 MYBPHLA2RUH7 354 aa8.55□□□□□ -1.04
PPP4R1-225ENST00000583438 CCDC169A6NNP5 214 aa8.55□□□□□ -1.04
PPP4R1-225ENST00000583438 SPECC1L-ADORA2AF8WAN1 911 aa8.55□□□□□ -1.04
PPP4R1-225ENST00000583438 GREM1O60565 184 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms