RNA–Protein interactions for RNA: ENST00000583363.5

CDK5RAP3-228, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 558 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-228ENST00000583363 SDHAF4Q5VUM1 108 aa17.21■□□□□ 0.35
CDK5RAP3-228ENST00000583363 SPATA31D4Q6ZUB0 917 aa17.21■□□□□ 0.35
CDK5RAP3-228ENST00000583363 GPRIN1Q7Z2K8 1008 aa17.21■□□□□ 0.35
CDK5RAP3-228ENST00000583363 PHLDB2Q86SQ0 1253 aa17.21■□□□□ 0.35
CDK5RAP3-228ENST00000583363 XYLT1Q86Y38 959 aa17.21■□□□□ 0.35
CDK5RAP3-228ENST00000583363 SCUBE3Q8IX30 993 aa17.21■□□□□ 0.35
CDK5RAP3-228ENST00000583363 CCAR2Q8N163 923 aaKnown RBP17.21■□□□□ 0.35
CDK5RAP3-228ENST00000583363 NUP93Q8N1F7 819 aa17.21■□□□□ 0.35
CDK5RAP3-228ENST00000583363 IPO4Q8TEX9 1081 aaKnown RBP17.21■□□□□ 0.35
CDK5RAP3-228ENST00000583363 SLC22A17Q8WUG5 538 aa17.21■□□□□ 0.35
CDK5RAP3-228ENST00000583363 CTNNBL1Q8WYA6 563 aaPredicted RBP17.21■□□□□ 0.35
CDK5RAP3-228ENST00000583363 ARHGEF26Q96DR7 871 aa17.21■□□□□ 0.35
CDK5RAP3-228ENST00000583363 MRPL38Q96DV4 380 aaKnown RBP17.21■□□□□ 0.35
CDK5RAP3-228ENST00000583363 CEP295NLQ96MC4 621 aa17.21■□□□□ 0.35
CDK5RAP3-228ENST00000583363 SYNCQ9H7C4 482 aa17.21■□□□□ 0.35
CDK5RAP3-228ENST00000583363 AVENQ9NQS1 362 aaPredicted RBP17.21■□□□□ 0.35
CDK5RAP3-228ENST00000583363 IL37Q9NZH6 218 aa17.21■□□□□ 0.35
CDK5RAP3-228ENST00000583363 WDR35Q9P2L0 1181 aa17.21■□□□□ 0.35
CDK5RAP3-228ENST00000583363 CNOT8Q9UFF9 292 aaKnown RBP17.21■□□□□ 0.35
CDK5RAP3-228ENST00000583363 FBXW11Q9UKB1 542 aa17.21■□□□□ 0.35
CDK5RAP3-228ENST00000583363 STRIP2Q9ULQ0 834 aa17.21■□□□□ 0.35
CDK5RAP3-228ENST00000583363 USP3Q9Y6I4 520 aa17.21■□□□□ 0.35
CDK5RAP3-228ENST00000583363 TCRBV5S1A1TA0A578 114 aa17.2■□□□□ 0.34
CDK5RAP3-228ENST00000583363 BTNL10A8MVZ5 291 aa17.2■□□□□ 0.34
CDK5RAP3-228ENST00000583363 PAPSS1O43252 624 aaPredicted RBP17.2■□□□□ 0.34
CDK5RAP3-228ENST00000583363 GLUD1P00367 558 aa17.2■□□□□ 0.34
CDK5RAP3-228ENST00000583363 ABL1P00519 1130 aa17.2■□□□□ 0.34
CDK5RAP3-228ENST00000583363 IL9P15248 144 aa17.2■□□□□ 0.34
CDK5RAP3-228ENST00000583363 ARHGAP25P42331 645 aa17.2■□□□□ 0.34
CDK5RAP3-228ENST00000583363 TKTL1P51854 596 aa17.2■□□□□ 0.34
CDK5RAP3-228ENST00000583363 KIF5AQ12840 1032 aa17.2■□□□□ 0.34
CDK5RAP3-228ENST00000583363 TCEAL1Q15170 157 aa17.2■□□□□ 0.34
CDK5RAP3-228ENST00000583363 OR6B2Q6IFH4 312 aa17.2■□□□□ 0.34
CDK5RAP3-228ENST00000583363 PLEKHA7Q6IQ23 1121 aa17.2■□□□□ 0.34
CDK5RAP3-228ENST00000583363 ADGRD2Q7Z7M1 963 aa17.2■□□□□ 0.34
CDK5RAP3-228ENST00000583363 ZDHHC17Q8IUH5 632 aa17.2■□□□□ 0.34
CDK5RAP3-228ENST00000583363 KREMEN2Q8NCW0 462 aa17.2■□□□□ 0.34
CDK5RAP3-228ENST00000583363 ZNF653Q96CK0 615 aa17.2■□□□□ 0.34
CDK5RAP3-228ENST00000583363 MCRS1Q96EZ8 462 aa17.2■□□□□ 0.34
CDK5RAP3-228ENST00000583363 TLE6Q9H808 572 aa17.2■□□□□ 0.34
CDK5RAP3-228ENST00000583363 COMMD8Q9NX08 183 aa17.2■□□□□ 0.34
CDK5RAP3-228ENST00000583363 TRMT1Q9NXH9 659 aaKnown RBP17.2■□□□□ 0.34
CDK5RAP3-228ENST00000583363 MYO1AQ9UBC5 1043 aa17.2■□□□□ 0.34
CDK5RAP3-228ENST00000583363 DUSP10Q9Y6W6 482 aa17.2■□□□□ 0.34
CDK5RAP3-228ENST00000583363 A0A0A6YYK5 440 aaPredicted RBP17.19■□□□□ 0.34
CDK5RAP3-228ENST00000583363 PRRG1O14668 218 aa17.19■□□□□ 0.34
CDK5RAP3-228ENST00000583363 PER2O15055 1255 aa17.19■□□□□ 0.34
CDK5RAP3-228ENST00000583363 CCP110O43303 1012 aa17.19■□□□□ 0.34
CDK5RAP3-228ENST00000583363 FBXO21O94952 628 aa17.19■□□□□ 0.34
CDK5RAP3-228ENST00000583363 ATF6P18850 670 aa17.19■□□□□ 0.34
CDK5RAP3-228ENST00000583363 ALDH1A3P47895 512 aa17.19■□□□□ 0.34
CDK5RAP3-228ENST00000583363 SLC6A3Q01959 620 aa17.19■□□□□ 0.34
CDK5RAP3-228ENST00000583363 ADIGQ0VDE8 80 aa17.19■□□□□ 0.34
CDK5RAP3-228ENST00000583363 MAMLD1Q13495 774 aa17.19■□□□□ 0.34
CDK5RAP3-228ENST00000583363 DUSP6Q16828 381 aa17.19■□□□□ 0.34
CDK5RAP3-228ENST00000583363 PM20D1Q6GTS8 502 aa17.19■□□□□ 0.34
CDK5RAP3-228ENST00000583363 LLGL2Q6P1M3 1020 aa17.19■□□□□ 0.34
CDK5RAP3-228ENST00000583363 FAM183BPQ6ZVS7 135 aa17.19■□□□□ 0.34
CDK5RAP3-228ENST00000583363 RTL10Q7L3V2 364 aa17.19■□□□□ 0.34
CDK5RAP3-228ENST00000583363 GJD3Q8N144 294 aa17.19■□□□□ 0.34
CDK5RAP3-228ENST00000583363 SCML4Q8N228 414 aa17.19■□□□□ 0.34
CDK5RAP3-228ENST00000583363 SCAMP5Q8TAC9 235 aa17.19■□□□□ 0.34
CDK5RAP3-228ENST00000583363 GIPC2Q8TF65 315 aa17.19■□□□□ 0.34
CDK5RAP3-228ENST00000583363 HDAC7Q8WUI4 952 aa17.19■□□□□ 0.34
CDK5RAP3-228ENST00000583363 CNGB3Q9NQW8 809 aa17.19■□□□□ 0.34
CDK5RAP3-228ENST00000583363 PARVAQ9NVD7 372 aa17.19■□□□□ 0.34
CDK5RAP3-228ENST00000583363 SIGLEC16A6NMB1 481 aa17.18■□□□□ 0.34
CDK5RAP3-228ENST00000583363 SLC38A8A6NNN8 435 aa17.18■□□□□ 0.34
CDK5RAP3-228ENST00000583363 USP27XA6NNY8 438 aa17.18■□□□□ 0.34
CDK5RAP3-228ENST00000583363 ATMINO43313 823 aaPredicted RBP17.18■□□□□ 0.34
CDK5RAP3-228ENST00000583363 SLC5A3P53794 718 aa17.18■□□□□ 0.34
CDK5RAP3-228ENST00000583363 TWF1Q12792 350 aa17.18■□□□□ 0.34
CDK5RAP3-228ENST00000583363 OLFML1Q6UWY5 402 aa17.18■□□□□ 0.34
CDK5RAP3-228ENST00000583363 CCDC149Q6ZUS6 474 aa17.18■□□□□ 0.34
CDK5RAP3-228ENST00000583363 DENND5BQ6ZUT9 1274 aa17.18■□□□□ 0.34
CDK5RAP3-228ENST00000583363 RBM23Q86U06 439 aaKnown RBP17.18■□□□□ 0.34
CDK5RAP3-228ENST00000583363 SIX6OS1Q8N1H7 587 aa17.18■□□□□ 0.34
CDK5RAP3-228ENST00000583363 C3orf20Q8ND61 904 aa17.18■□□□□ 0.34
CDK5RAP3-228ENST00000583363 SLC35G2Q8TBE7 412 aa17.18■□□□□ 0.34
CDK5RAP3-228ENST00000583363 GPR152Q8TDT2 470 aa17.18■□□□□ 0.34
CDK5RAP3-228ENST00000583363 NDRG1Q92597 394 aaKnown RBP17.18■□□□□ 0.34
CDK5RAP3-228ENST00000583363 ULBP1Q9BZM6 244 aa17.18■□□□□ 0.34
CDK5RAP3-228ENST00000583363 TSGA10Q9BZW7 698 aa17.18■□□□□ 0.34
CDK5RAP3-228ENST00000583363 PLEKHA4Q9H4M7 779 aa17.18■□□□□ 0.34
CDK5RAP3-228ENST00000583363 MRPL47Q9HD33 250 aaKnown RBP17.18■□□□□ 0.34
CDK5RAP3-228ENST00000583363 TRIM10Q9UDY6 481 aa17.18■□□□□ 0.34
CDK5RAP3-228ENST00000583363 CHORDC1Q9UHD1 332 aaPredicted RBP17.18■□□□□ 0.34
CDK5RAP3-228ENST00000583363 SALL4Q9UJQ4 1053 aa17.18■□□□□ 0.34
CDK5RAP3-228ENST00000583363 YIPF1Q9Y548 306 aa17.18■□□□□ 0.34
CDK5RAP3-228ENST00000583363 INSL5Q9Y5Q6 135 aa17.18■□□□□ 0.34
CDK5RAP3-228ENST00000583363 NCANO14594 1321 aa17.18■□□□□ 0.34
CDK5RAP3-228ENST00000583363 FAM92AA1XBS5 289 aa17.17■□□□□ 0.34
CDK5RAP3-228ENST00000583363 GOLGA8SH3BPF8 625 aa17.17■□□□□ 0.34
CDK5RAP3-228ENST00000583363 KRT86O43790 486 aa17.17■□□□□ 0.34
CDK5RAP3-228ENST00000583363 RTN3O95197 1032 aaPredicted RBP17.17■□□□□ 0.34
CDK5RAP3-228ENST00000583363 ZBED1O96006 694 aa17.17■□□□□ 0.34
CDK5RAP3-228ENST00000583363 USP17L7P0C7H9 530 aa17.17■□□□□ 0.34
CDK5RAP3-228ENST00000583363 EPCAMP16422 314 aa17.17■□□□□ 0.34
CDK5RAP3-228ENST00000583363 SCNN1AP37088 669 aa17.17■□□□□ 0.34
CDK5RAP3-228ENST00000583363 DAOAP59103 153 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms