RNA–Protein interactions for RNA: ENST00000583043.5

RTTN-209, Transcript of rotatin, humanhuman

TSL 1 (best)

Gene RTTN, Length 6,278 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-209ENST00000583043 PEX5P50542 639 aa6.08□□□□□ -1.44
RTTN-209ENST00000583043 OSTNP61366 133 aa6.08□□□□□ -1.44
RTTN-209ENST00000583043 MRPS9P82933 396 aaKnown RBP6.08□□□□□ -1.44
RTTN-209ENST00000583043 ELMSAN1Q6PJG2 1045 aa6.08□□□□□ -1.44
RTTN-209ENST00000583043 ABI1Q8IZP0 508 aa6.08□□□□□ -1.44
RTTN-209ENST00000583043 ST13P4Q8IZP2 240 aaPredicted RBP6.08□□□□□ -1.44
RTTN-209ENST00000583043 RDH11Q8TC12 318 aa6.08□□□□□ -1.44
RTTN-209ENST00000583043 SOCS4Q8WXH5 440 aa6.08□□□□□ -1.44
RTTN-209ENST00000583043 USP6NLQ92738 828 aa6.08□□□□□ -1.44
RTTN-209ENST00000583043 ASB2Q96Q27 587 aa6.08□□□□□ -1.44
RTTN-209ENST00000583043 PPARGC1AQ9UBK2 798 aaKnown RBP6.08□□□□□ -1.44
RTTN-209ENST00000583043 PHTF1Q9UMS5 762 aa6.08□□□□□ -1.44
RTTN-209ENST00000583043 NRCAMQ92823 1304 aa6.08□□□□□ -1.44
RTTN-209ENST00000583043 CNTNAP2Q9UHC6 1331 aa6.08□□□□□ -1.44
RTTN-209ENST00000583043 BCORQ6W2J9 1755 aa6.08□□□□□ -1.44
RTTN-209ENST00000583043 SPDYE5A6NIY4 337 aa6.08□□□□□ -1.44
RTTN-209ENST00000583043 SNX3O60493 162 aa6.08□□□□□ -1.44
RTTN-209ENST00000583043 ATG7O95352 703 aa6.08□□□□□ -1.44
RTTN-209ENST00000583043 ITGB3P05106 788 aa6.08□□□□□ -1.44
RTTN-209ENST00000583043 FAM153BP0C7A2 387 aa6.08□□□□□ -1.44
RTTN-209ENST00000583043 CCDC130P13994 396 aa6.08□□□□□ -1.44
RTTN-209ENST00000583043 TPSB2P20231 275 aa6.08□□□□□ -1.44
RTTN-209ENST00000583043 HNRNPH1P31943 449 aaKnown RBP6.08□□□□□ -1.44
RTTN-209ENST00000583043 MGAT5Q09328 741 aa6.08□□□□□ -1.44
RTTN-209ENST00000583043 ELAVL2Q12926 359 aaKnown RBP6.08□□□□□ -1.44
RTTN-209ENST00000583043 RPS6KA2Q15349 733 aa6.08□□□□□ -1.44
RTTN-209ENST00000583043 TPSAB1Q15661 275 aa6.08□□□□□ -1.44
RTTN-209ENST00000583043 INSCQ1MX18 579 aa6.08□□□□□ -1.44
RTTN-209ENST00000583043 FAM153CQ494X1 144 aa6.08□□□□□ -1.44
RTTN-209ENST00000583043 ZNF394Q53GI3 561 aa6.08□□□□□ -1.44
RTTN-209ENST00000583043 KSR1Q8IVT5 923 aa6.08□□□□□ -1.44
RTTN-209ENST00000583043 NKX2-3Q8TAU0 364 aa6.08□□□□□ -1.44
RTTN-209ENST00000583043 PAFAH2Q99487 392 aa6.08□□□□□ -1.44
RTTN-209ENST00000583043 TRIM56Q9BRZ2 755 aaKnown RBP6.08□□□□□ -1.44
RTTN-209ENST00000583043 CHST12Q9NRB3 414 aa6.08□□□□□ -1.44
RTTN-209ENST00000583043 SEPT10Q9P0V9 454 aa6.08□□□□□ -1.44
RTTN-209ENST00000583043 CPSF2Q9P2I0 782 aaKnown RBP6.08□□□□□ -1.44
RTTN-209ENST00000583043 VTI1BQ9UEU0 232 aa6.08□□□□□ -1.44
RTTN-209ENST00000583043 FAM153AQ9UHL3 310 aa6.08□□□□□ -1.44
RTTN-209ENST00000583043 TMCO1Q9UM00 188 aa6.08□□□□□ -1.44
RTTN-209ENST00000583043 LTBP4Q8N2S1 1624 aa6.08□□□□□ -1.44
RTTN-209ENST00000583043 GRIN2DO15399 1336 aa6.08□□□□□ -1.44
RTTN-209ENST00000583043 UNGP13051 313 aaPredicted RBP6.08□□□□□ -1.44
RTTN-209ENST00000583043 PGAM1P18669 254 aa6.08□□□□□ -1.44
RTTN-209ENST00000583043 ETFBP38117 255 aa6.08□□□□□ -1.44
RTTN-209ENST00000583043 PTPN9P43378 593 aa6.08□□□□□ -1.44
RTTN-209ENST00000583043 CAPSQ13938 189 aa6.08□□□□□ -1.44
RTTN-209ENST00000583043 PDK4Q16654 411 aa6.08□□□□□ -1.44
RTTN-209ENST00000583043 ZC3H12AQ5D1E8 599 aaKnown RBP6.08□□□□□ -1.44
RTTN-209ENST00000583043 FBXO47Q5MNV8 452 aa6.08□□□□□ -1.44
RTTN-209ENST00000583043 GRTP1Q5TC63 336 aa6.08□□□□□ -1.44
RTTN-209ENST00000583043 LCLAT1Q6UWP7 414 aa6.08□□□□□ -1.44
RTTN-209ENST00000583043 RAPH1Q70E73 1250 aa6.08□□□□□ -1.44
RTTN-209ENST00000583043 TOP6BLQ8N6T0 577 aa6.08□□□□□ -1.44
RTTN-209ENST00000583043 KREMEN1Q96MU8 473 aa6.08□□□□□ -1.44
RTTN-209ENST00000583043 CENPKQ9BS16 269 aa6.08□□□□□ -1.44
RTTN-209ENST00000583043 OXCT2Q9BYC2 517 aaPredicted RBP6.08□□□□□ -1.44
RTTN-209ENST00000583043 FNIP2Q9P278 1114 aa6.08□□□□□ -1.44
RTTN-209ENST00000583043 C17orf102A2RUQ5 167 aa6.07□□□□□ -1.44
RTTN-209ENST00000583043 DPYSL4O14531 572 aa6.07□□□□□ -1.44
RTTN-209ENST00000583043 FARP2O94887 1054 aaPredicted RBP6.07□□□□□ -1.44
RTTN-209ENST00000583043 CCNE2O96020 404 aa6.07□□□□□ -1.44
RTTN-209ENST00000583043 CDH5P33151 784 aaPredicted RBP6.07□□□□□ -1.44
RTTN-209ENST00000583043 PTGIRP43119 386 aa6.07□□□□□ -1.44
RTTN-209ENST00000583043 GSCP56915 257 aaPredicted RBP6.07□□□□□ -1.44
RTTN-209ENST00000583043 ABCE1P61221 599 aaKnown RBP6.07□□□□□ -1.44
RTTN-209ENST00000583043 DYNC1I2Q13409 638 aaKnown RBP6.07□□□□□ -1.44
RTTN-209ENST00000583043 TRMT5Q32P41 509 aaKnown RBP6.07□□□□□ -1.44
RTTN-209ENST00000583043 TDRD10Q5VZ19 366 aaKnown RBP6.07□□□□□ -1.44
RTTN-209ENST00000583043 BTBD8Q5XKL5 378 aa6.07□□□□□ -1.44
RTTN-209ENST00000583043 STRADAQ7RTN6 431 aa6.07□□□□□ -1.44
RTTN-209ENST00000583043 RASSF3Q86WH2 238 aa6.07□□□□□ -1.44
RTTN-209ENST00000583043 FAM9CQ8IZT9 166 aa6.07□□□□□ -1.44
RTTN-209ENST00000583043 OR2W6PQ8NHA6 318 aa6.07□□□□□ -1.44
RTTN-209ENST00000583043 LRGUKQ96M69 825 aa6.07□□□□□ -1.44
RTTN-209ENST00000583043 SRPK1Q96SB4 655 aaKnown RBP6.07□□□□□ -1.44
RTTN-209ENST00000583043 HINFPQ9BQA5 517 aa6.07□□□□□ -1.44
RTTN-209ENST00000583043 NUF2Q9BZD4 464 aa6.07□□□□□ -1.44
RTTN-209ENST00000583043 NACA2Q9H009 215 aa6.07□□□□□ -1.44
RTTN-209ENST00000583043 HEY1Q9Y5J3 304 aa6.07□□□□□ -1.44
RTTN-209ENST00000583043 A0A0G2JND7 137 aa6.07□□□□□ -1.44
RTTN-209ENST00000583043 MDM4O15151 490 aa6.07□□□□□ -1.44
RTTN-209ENST00000583043 CABYRO75952 493 aa6.07□□□□□ -1.44
RTTN-209ENST00000583043 KCNJ1P48048 391 aa6.07□□□□□ -1.44
RTTN-209ENST00000583043 SEC24CP53992 1094 aa6.07□□□□□ -1.44
RTTN-209ENST00000583043 HIC1Q14526 733 aa6.07□□□□□ -1.44
RTTN-209ENST00000583043 LVRNQ6Q4G3 990 aa6.07□□□□□ -1.44
RTTN-209ENST00000583043 EEPD1Q7L9B9 569 aa6.07□□□□□ -1.44
RTTN-209ENST00000583043 SAMD7Q7Z3H4 446 aa6.07□□□□□ -1.44
RTTN-209ENST00000583043 FBXO36Q8NEA4 188 aa6.07□□□□□ -1.44
RTTN-209ENST00000583043 SLC9A7Q96T83 725 aa6.07□□□□□ -1.44
RTTN-209ENST00000583043 VRTNQ9H8Y1 702 aa6.07□□□□□ -1.44
RTTN-209ENST00000583043 STAU2Q9NUL3 570 aaKnown RBP eCLIP6.07□□□□□ -1.44
RTTN-209ENST00000583043 KBTBD13C9JR72 458 aa6.07□□□□□ -1.44
RTTN-209ENST00000583043 DRD4P21917 467 aa6.07□□□□□ -1.44
RTTN-209ENST00000583043 YY1P25490 414 aa6.07□□□□□ -1.44
RTTN-209ENST00000583043 SERPINB5P36952 375 aa6.07□□□□□ -1.44
RTTN-209ENST00000583043 HIRAP54198 1017 aaPredicted RBP6.07□□□□□ -1.44
RTTN-209ENST00000583043 CSE1LP55060 971 aaKnown RBP6.07□□□□□ -1.44
RTTN-209ENST00000583043 MRPS25P82663 173 aaKnown RBP6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms