RNA–Protein interactions for RNA: ENST00000582772.1

MSI2-216, Transcript of musashi RNA binding protein 2, human

TSL 3

Gene MSI2, Length 398 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MSI2-216	ENST00000582772	DNAJA1	P31689	397 aa	Known RBP	5.44	□□□□□ -1.54
MSI2-216	ENST00000582772	UGT1A5	P35504	534 aa		5.44	□□□□□ -1.54
MSI2-216	ENST00000582772	ZNF132	P52740	706 aa		5.44	□□□□□ -1.54
MSI2-216	ENST00000582772	IST1	P53990	364 aa		5.44	□□□□□ -1.54
MSI2-216	ENST00000582772	IRX6	P78412	446 aa	Predicted RBP	5.44	□□□□□ -1.54
MSI2-216	ENST00000582772	BNIP3	Q12983	259 aa		5.44	□□□□□ -1.54
MSI2-216	ENST00000582772	ITGB3BP	Q13352	177 aa	Predicted RBP	5.44	□□□□□ -1.54
MSI2-216	ENST00000582772	RALBP1	Q15311	655 aa		5.44	□□□□□ -1.54
MSI2-216	ENST00000582772	NR6A1	Q15406	480 aa		5.44	□□□□□ -1.54
MSI2-216	ENST00000582772	PRAMEF14	Q5SWL7	426 aa		5.44	□□□□□ -1.54
MSI2-216	ENST00000582772	CEP135	Q66GS9	1140 aa		5.44	□□□□□ -1.54
MSI2-216	ENST00000582772	ZSCAN25	Q6NSZ9	544 aa		5.44	□□□□□ -1.54
MSI2-216	ENST00000582772	FOXR1	Q6PIV2	292 aa		5.44	□□□□□ -1.54
MSI2-216	ENST00000582772	KIAA1324	Q6UXG2	1013 aa	Known RBP	5.44	□□□□□ -1.54
MSI2-216	ENST00000582772	RNF19B	Q6ZMZ0	732 aa		5.44	□□□□□ -1.54
MSI2-216	ENST00000582772	MIB1	Q86YT6	1006 aa		5.44	□□□□□ -1.54
MSI2-216	ENST00000582772	ADGRG2	Q8IZP9	1017 aa		5.44	□□□□□ -1.54
MSI2-216	ENST00000582772	FAM9B	Q8IZU0	186 aa		5.44	□□□□□ -1.54
MSI2-216	ENST00000582772	NXPE1	Q8N323	547 aa		5.44	□□□□□ -1.54
MSI2-216	ENST00000582772	WDR48	Q8TAF3	677 aa		5.44	□□□□□ -1.54
MSI2-216	ENST00000582772	BIRC7	Q96CA5	298 aa		5.44	□□□□□ -1.54
MSI2-216	ENST00000582772	SLC45A3	Q96JT2	553 aa		5.44	□□□□□ -1.54
MSI2-216	ENST00000582772	NXF3	Q9H4D5	531 aa	Known RBP	5.44	□□□□□ -1.54
MSI2-216	ENST00000582772	C6orf106	Q9H6K1	298 aa	Predicted RBP	5.44	□□□□□ -1.54
MSI2-216	ENST00000582772	TMEM206	Q9H813	350 aa		5.44	□□□□□ -1.54
MSI2-216	ENST00000582772	PAG1	Q9NWQ8	432 aa		5.44	□□□□□ -1.54
MSI2-216	ENST00000582772	NOP58	Q9Y2X3	529 aa	Known RBP	5.44	□□□□□ -1.54
MSI2-216	ENST00000582772	NEU2	Q9Y3R4	380 aa		5.44	□□□□□ -1.54
MSI2-216	ENST00000582772	CACNA1C	Q13936	2221 aa		5.44	□□□□□ -1.54
MSI2-216	ENST00000582772	MTMR11	A4FU01	709 aa		5.43	□□□□□ -1.54
MSI2-216	ENST00000582772	ANKUB1	A6NFN9	424 aa		5.43	□□□□□ -1.54
MSI2-216	ENST00000582772	PTGES	O14684	152 aa		5.43	□□□□□ -1.54
MSI2-216	ENST00000582772	RANBP6	O60518	1105 aa	Known RBP	5.43	□□□□□ -1.54
MSI2-216	ENST00000582772	NEFL	P07196	543 aa		5.43	□□□□□ -1.54
MSI2-216	ENST00000582772	GNAI3	P08754	354 aa		5.43	□□□□□ -1.54
MSI2-216	ENST00000582772	PCSK6	P29122	969 aa		5.43	□□□□□ -1.54
MSI2-216	ENST00000582772	ADSL	P30566	484 aa	Predicted RBP	5.43	□□□□□ -1.54
MSI2-216	ENST00000582772	ALDH1A3	P47895	512 aa		5.43	□□□□□ -1.54
MSI2-216	ENST00000582772	TRAPPC10	P48553	1259 aa		5.43	□□□□□ -1.54
MSI2-216	ENST00000582772	ADAM8	P78325	824 aa		5.43	□□□□□ -1.54
MSI2-216	ENST00000582772	TLE4	Q04727	773 aa		5.43	□□□□□ -1.54
MSI2-216	ENST00000582772	CDC20	Q12834	499 aa		5.43	□□□□□ -1.54
MSI2-216	ENST00000582772	PRR30	Q53SZ7	412 aa	Predicted RBP	5.43	□□□□□ -1.54
MSI2-216	ENST00000582772	NOTUM	Q6P988	496 aa		5.43	□□□□□ -1.54
MSI2-216	ENST00000582772	SRGAP1	Q7Z6B7	1085 aa		5.43	□□□□□ -1.54
MSI2-216	ENST00000582772	MON1A	Q86VX9	555 aa		5.43	□□□□□ -1.54
MSI2-216	ENST00000582772	KSR1	Q8IVT5	923 aa		5.43	□□□□□ -1.54
MSI2-216	ENST00000582772	ETFBKMT	Q8IXQ9	262 aa		5.43	□□□□□ -1.54
MSI2-216	ENST00000582772	AHI1	Q8N157	1196 aa		5.43	□□□□□ -1.54
MSI2-216	ENST00000582772	MAB21L3	Q8N8X9	362 aa		5.43	□□□□□ -1.54
MSI2-216	ENST00000582772	SNX19	Q92543	992 aa		5.43	□□□□□ -1.54
MSI2-216	ENST00000582772	MKRN2	Q9H000	416 aa	Known RBP	5.43	□□□□□ -1.54
MSI2-216	ENST00000582772	CDH19	Q9H159	772 aa		5.43	□□□□□ -1.54
MSI2-216	ENST00000582772	CDT1	Q9H211	546 aa		5.43	□□□□□ -1.54
MSI2-216	ENST00000582772	CRISPLD1	Q9H336	500 aa		5.43	□□□□□ -1.54
MSI2-216	ENST00000582772	CYP4F12	Q9HCS2	524 aa		5.43	□□□□□ -1.54
MSI2-216	ENST00000582772	EVA1B	Q9NVM1	165 aa		5.43	□□□□□ -1.54
MSI2-216	ENST00000582772	ARMCX1	Q9P291	453 aa		5.43	□□□□□ -1.54
MSI2-216	ENST00000582772	ANAPC4	Q9UJX5	808 aa		5.43	□□□□□ -1.54
MSI2-216	ENST00000582772	KCTD3	Q9Y597	815 aa		5.43	□□□□□ -1.54
MSI2-216	ENST00000582772	RYR2	Q92736	4967 aa		5.43	□□□□□ -1.54
MSI2-216	ENST00000582772	TDRD6	O60522	2096 aa	Known RBP	5.43	□□□□□ -1.54
MSI2-216	ENST00000582772	HERC2	O95714	4834 aa		5.42	□□□□□ -1.54
MSI2-216	ENST00000582772		A0A1W2PR77	199 aa		5.42	□□□□□ -1.54
MSI2-216	ENST00000582772	C10orf142	B7Z368	130 aa		5.42	□□□□□ -1.54
MSI2-216	ENST00000582772	PATL2	C9JE40	543 aa	Known RBP	5.42	□□□□□ -1.54
MSI2-216	ENST00000582772	LRRTM2	O43300	516 aa		5.42	□□□□□ -1.54
MSI2-216	ENST00000582772	B3GAT3	O94766	335 aa		5.42	□□□□□ -1.54
MSI2-216	ENST00000582772	PDGFA	P04085	211 aa		5.42	□□□□□ -1.54
MSI2-216	ENST00000582772	TH	P07101	528 aa		5.42	□□□□□ -1.54
MSI2-216	ENST00000582772	P4HB	P07237	508 aa	Known RBP	5.42	□□□□□ -1.54
MSI2-216	ENST00000582772	SNRPB2	P08579	225 aa	Known RBP	5.42	□□□□□ -1.54
MSI2-216	ENST00000582772	GIMD1	P0DJR0	217 aa		5.42	□□□□□ -1.54
MSI2-216	ENST00000582772	LIF	P15018	202 aa		5.42	□□□□□ -1.54
MSI2-216	ENST00000582772	IGFBP6	P24592	240 aa	Predicted RBP	5.42	□□□□□ -1.54
MSI2-216	ENST00000582772	BCAT1	P54687	386 aa		5.42	□□□□□ -1.54
MSI2-216	ENST00000582772	ARPP19	P56211	112 aa		5.42	□□□□□ -1.54
MSI2-216	ENST00000582772	NXPH1	P58417	271 aa		5.42	□□□□□ -1.54
MSI2-216	ENST00000582772	SSRP1	Q08945	709 aa	Known RBP	5.42	□□□□□ -1.54
MSI2-216	ENST00000582772	TARBP2	Q15633	366 aa	Known RBP	5.42	□□□□□ -1.54
MSI2-216	ENST00000582772	VWA2	Q5GFL6	755 aa		5.42	□□□□□ -1.54
MSI2-216	ENST00000582772	JAKMIP3	Q5VZ66	844 aa		5.42	□□□□□ -1.54
MSI2-216	ENST00000582772	SDE2	Q6IQ49	451 aa		5.42	□□□□□ -1.54
MSI2-216	ENST00000582772	ZNF280D	Q6N043	979 aa		5.42	□□□□□ -1.54
MSI2-216	ENST00000582772	SWSAP1	Q6NVH7	229 aa		5.42	□□□□□ -1.54
MSI2-216	ENST00000582772	MIS18BP1	Q6P0N0	1132 aa		5.42	□□□□□ -1.54
MSI2-216	ENST00000582772	RAB11FIP2	Q7L804	512 aa		5.42	□□□□□ -1.54
MSI2-216	ENST00000582772	ZFAND4	Q86XD8	727 aa		5.42	□□□□□ -1.54
MSI2-216	ENST00000582772	JAML	Q86YT9	394 aa		5.42	□□□□□ -1.54
MSI2-216	ENST00000582772	CKAP2L	Q8IYA6	745 aa		5.42	□□□□□ -1.54
MSI2-216	ENST00000582772	SLC25A45	Q8N413	288 aa		5.42	□□□□□ -1.54
MSI2-216	ENST00000582772	FBXO39	Q8N4B4	442 aa		5.42	□□□□□ -1.54
MSI2-216	ENST00000582772	TERB1	Q8NA31	727 aa		5.42	□□□□□ -1.54
MSI2-216	ENST00000582772	ACBD4	Q8NC06	268 aa		5.42	□□□□□ -1.54
MSI2-216	ENST00000582772	SSH3	Q8TE77	659 aa		5.42	□□□□□ -1.54
MSI2-216	ENST00000582772	CEP89	Q96ST8	783 aa		5.42	□□□□□ -1.54
MSI2-216	ENST00000582772	BARD1	Q99728	777 aa	Known RBP	5.42	□□□□□ -1.54
MSI2-216	ENST00000582772	LINC00597	Q9H2U6	94 aa		5.42	□□□□□ -1.54
MSI2-216	ENST00000582772	MINDY3	Q9H8M7	445 aa		5.42	□□□□□ -1.54
MSI2-216	ENST00000582772	RRN3	Q9NYV6	651 aa		5.42	□□□□□ -1.54

Retrieved 100 of 20,778 RNA–protein pairs in 39 ms