RNA–Protein interactions for RNA: ENST00000581383.1

SMCHD1-205, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 806 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-205ENST00000581383 EIF2AQ9BY44 585 aaKnown RBP5.56□□□□□ -1.52
SMCHD1-205ENST00000581383 TPSD1Q9BZJ3 242 aa5.56□□□□□ -1.52
SMCHD1-205ENST00000581383 DDX24Q9GZR7 859 aaKnown RBP eCLIP5.56□□□□□ -1.52
SMCHD1-205ENST00000581383 RGL1Q9NZL6 768 aa5.56□□□□□ -1.52
SMCHD1-205ENST00000581383 SERTAD3Q9UJW9 196 aa5.56□□□□□ -1.52
SMCHD1-205ENST00000581383 CAPN11Q9UMQ6 739 aa5.56□□□□□ -1.52
SMCHD1-205ENST00000581383 SSX2IPQ9Y2D8 614 aa5.56□□□□□ -1.52
SMCHD1-205ENST00000581383 UTP18Q9Y5J1 556 aaKnown RBP eCLIP5.56□□□□□ -1.52
SMCHD1-205ENST00000581383 SRGAP2O75044 1071 aa5.55□□□□□ -1.52
SMCHD1-205ENST00000581383 ATICP31939 592 aa5.55□□□□□ -1.52
SMCHD1-205ENST00000581383 HALP42357 657 aa5.55□□□□□ -1.52
SMCHD1-205ENST00000581383 ICA1Q05084 483 aa5.55□□□□□ -1.52
SMCHD1-205ENST00000581383 ZRSR2Q15696 482 aaKnown RBP5.55□□□□□ -1.52
SMCHD1-205ENST00000581383 CCDC38Q502W7 563 aa5.55□□□□□ -1.52
SMCHD1-205ENST00000581383 EPHA10Q5JZY3 1008 aa5.55□□□□□ -1.52
SMCHD1-205ENST00000581383 ICE2Q659A1 982 aa5.55□□□□□ -1.52
SMCHD1-205ENST00000581383 SFRP4Q6FHJ7 346 aaPredicted RBP5.55□□□□□ -1.52
SMCHD1-205ENST00000581383 SPARTQ8N0X7 666 aa5.55□□□□□ -1.52
SMCHD1-205ENST00000581383 CYP2W1Q8TAV3 490 aa5.55□□□□□ -1.52
SMCHD1-205ENST00000581383 DNAJB14Q8TBM8 379 aa5.55□□□□□ -1.52
SMCHD1-205ENST00000581383 NTN5Q8WTR8 489 aaPredicted RBP5.55□□□□□ -1.52
SMCHD1-205ENST00000581383 FAM136AQ96C01 138 aa5.55□□□□□ -1.52
SMCHD1-205ENST00000581383 SNX27Q96L92 541 aa5.55□□□□□ -1.52
SMCHD1-205ENST00000581383 OSBPL9Q96SU4 736 aa5.55□□□□□ -1.52
SMCHD1-205ENST00000581383 AMBRA1Q9C0C7 1298 aa5.55□□□□□ -1.52
SMCHD1-205ENST00000581383 SLC17A6Q9P2U8 582 aa5.55□□□□□ -1.52
SMCHD1-205ENST00000581383 ZMYND8Q9ULU4 1186 aaPredicted RBP5.55□□□□□ -1.52
SMCHD1-205ENST00000581383 MORC2Q9Y6X9 1032 aaPredicted RBP5.55□□□□□ -1.52
SMCHD1-205ENST00000581383 SALL3Q9BXA9 1300 aa5.54□□□□□ -1.52
SMCHD1-205ENST00000581383 AQP7P3A6NL99 342 aa5.54□□□□□ -1.52
SMCHD1-205ENST00000581383 PPM1DO15297 605 aa5.54□□□□□ -1.52
SMCHD1-205ENST00000581383 PIP5K1CO60331 668 aa5.54□□□□□ -1.52
SMCHD1-205ENST00000581383 CSF1RP07333 972 aa5.54□□□□□ -1.52
SMCHD1-205ENST00000581383 PDHA1P08559 390 aa5.54□□□□□ -1.52
SMCHD1-205ENST00000581383 IDEP14735 1019 aa5.54□□□□□ -1.52
SMCHD1-205ENST00000581383 ADORA2AP29274 412 aa5.54□□□□□ -1.52
SMCHD1-205ENST00000581383 PDIA3P30101 505 aaKnown RBP5.54□□□□□ -1.52
SMCHD1-205ENST00000581383 PPIFP30405 207 aaKnown RBP5.54□□□□□ -1.52
SMCHD1-205ENST00000581383 RARRES1P49788 294 aa5.54□□□□□ -1.52
SMCHD1-205ENST00000581383 HNRNPMP52272 730 aaKnown RBP eCLIP5.54□□□□□ -1.52
SMCHD1-205ENST00000581383 SIM1P81133 766 aaPredicted RBP5.54□□□□□ -1.52
SMCHD1-205ENST00000581383 SP2Q02086 613 aa5.54□□□□□ -1.52
SMCHD1-205ENST00000581383 RAB30Q15771 203 aa5.54□□□□□ -1.52
SMCHD1-205ENST00000581383 PDCD2Q16342 344 aaPredicted RBP5.54□□□□□ -1.52
SMCHD1-205ENST00000581383 PFKFB4Q16877 469 aa5.54□□□□□ -1.52
SMCHD1-205ENST00000581383 ARHGAP15Q53QZ3 475 aa5.54□□□□□ -1.52
SMCHD1-205ENST00000581383 INO80DQ53TQ3 878 aaPredicted RBP5.54□□□□□ -1.52
SMCHD1-205ENST00000581383 KIAA0408Q6ZU52 694 aa5.54□□□□□ -1.52
SMCHD1-205ENST00000581383 SLC15A3Q8IY34 581 aa5.54□□□□□ -1.52
SMCHD1-205ENST00000581383 ANKRD42Q8N9B4 389 aa5.54□□□□□ -1.52
SMCHD1-205ENST00000581383 IPO4Q8TEX9 1081 aaKnown RBP5.54□□□□□ -1.52
SMCHD1-205ENST00000581383 ACTRT3Q9BYD9 372 aa5.54□□□□□ -1.52
SMCHD1-205ENST00000581383 TRIM5Q9C035 493 aa5.54□□□□□ -1.52
SMCHD1-205ENST00000581383 PCDHAC1Q9H158 963 aa5.54□□□□□ -1.52
SMCHD1-205ENST00000581383 FAM83DQ9H4H8 585 aa5.54□□□□□ -1.52
SMCHD1-205ENST00000581383 OBP2BQ9NPH6 170 aa5.54□□□□□ -1.52
SMCHD1-205ENST00000581383 TM7SF3Q9NS93 570 aa5.54□□□□□ -1.52
SMCHD1-205ENST00000581383 HPSEQ9Y251 543 aa5.54□□□□□ -1.52
SMCHD1-205ENST00000581383 hCG_1642624A0A1W2PR95 340 aa5.53□□□□□ -1.52
SMCHD1-205ENST00000581383 KCNQ3O43525 872 aa5.53□□□□□ -1.52
SMCHD1-205ENST00000581383 COQ9O75208 318 aa5.53□□□□□ -1.52
SMCHD1-205ENST00000581383 SKAP2O75563 359 aaPredicted RBP5.53□□□□□ -1.52
SMCHD1-205ENST00000581383 PPP3CBP16298 524 aa5.53□□□□□ -1.52
SMCHD1-205ENST00000581383 PRKAR1BP31321 381 aa5.53□□□□□ -1.52
SMCHD1-205ENST00000581383 CACNA2D1P54289 1103 aa5.53□□□□□ -1.52
SMCHD1-205ENST00000581383 GALNT1Q10472 559 aaPredicted RBP5.53□□□□□ -1.52
SMCHD1-205ENST00000581383 SF3B3Q15393 1217 aaKnown RBP5.53□□□□□ -1.52
SMCHD1-205ENST00000581383 DEPDC1Q5TB30 811 aa5.53□□□□□ -1.52
SMCHD1-205ENST00000581383 FAXCQ5TGI0 409 aa5.53□□□□□ -1.52
SMCHD1-205ENST00000581383 MANEALQ5VSG8 457 aa5.53□□□□□ -1.52
SMCHD1-205ENST00000581383 RAP1GAP2Q684P5 730 aa5.53□□□□□ -1.52
SMCHD1-205ENST00000581383 CCDC28AQ8IWP9 274 aa5.53□□□□□ -1.52
SMCHD1-205ENST00000581383 FAM109AQ8N4B1 249 aa5.53□□□□□ -1.52
SMCHD1-205ENST00000581383 MYCT1Q8N699 235 aa5.53□□□□□ -1.52
SMCHD1-205ENST00000581383 ATG16L2Q8NAA4 619 aa5.53□□□□□ -1.52
SMCHD1-205ENST00000581383 B3GALNT2Q8NCR0 500 aa5.53□□□□□ -1.52
SMCHD1-205ENST00000581383 LPIN2Q92539 896 aa5.53□□□□□ -1.52
SMCHD1-205ENST00000581383 FBXL20Q96IG2 436 aa5.53□□□□□ -1.52
SMCHD1-205ENST00000581383 ZBTB45Q96K62 511 aaPredicted RBP5.53□□□□□ -1.52
SMCHD1-205ENST00000581383 HERPUD2Q9BSE4 406 aa5.53□□□□□ -1.52
SMCHD1-205ENST00000581383 SLC29A3Q9BZD2 475 aa5.53□□□□□ -1.52
SMCHD1-205ENST00000581383 NECTIN3Q9NQS3 549 aa5.53□□□□□ -1.52
SMCHD1-205ENST00000581383 ASB6Q9NWX5 421 aa5.53□□□□□ -1.52
SMCHD1-205ENST00000581383 KCTD5Q9NXV2 234 aa5.53□□□□□ -1.52
SMCHD1-205ENST00000581383 IGSF9Q9P2J2 1179 aa5.53□□□□□ -1.52
SMCHD1-205ENST00000581383 COL11A2P13942 1736 aaPredicted RBP5.53□□□□□ -1.52
SMCHD1-205ENST00000581383 GOLGA6L3A6NEY3 463 aa5.52□□□□□ -1.53
SMCHD1-205ENST00000581383 AQP12BA6NM10 295 aa5.52□□□□□ -1.53
SMCHD1-205ENST00000581383 LGALS16A8MUM7 142 aa5.52□□□□□ -1.53
SMCHD1-205ENST00000581383 PIP5K1BO14986 540 aa5.52□□□□□ -1.53
SMCHD1-205ENST00000581383 CSTBP04080 98 aaKnown RBP5.52□□□□□ -1.53
SMCHD1-205ENST00000581383 ERBB2P04626 1255 aa5.52□□□□□ -1.53
SMCHD1-205ENST00000581383 HGFP14210 728 aa5.52□□□□□ -1.53
SMCHD1-205ENST00000581383 SCAPQ12770 1279 aa5.52□□□□□ -1.53
SMCHD1-205ENST00000581383 BLMHQ13867 455 aa5.52□□□□□ -1.53
SMCHD1-205ENST00000581383 CCNIQ14094 377 aa5.52□□□□□ -1.53
SMCHD1-205ENST00000581383 SPARCL1Q14515 664 aa5.52□□□□□ -1.53
SMCHD1-205ENST00000581383 ZACNQ401N2 412 aa5.52□□□□□ -1.53
SMCHD1-205ENST00000581383 EEF1AKMT2Q5JPI9 291 aaKnown RBP5.52□□□□□ -1.53
SMCHD1-205ENST00000581383 KAZNQ674X7 775 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms