RNA–Protein interactions for RNA: ENST00000581265.1

RFFL-209, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 596 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-209ENST00000581265 SH3PXD2AQ5TCZ1 1133 aa11.27□□□□□ -0.61
RFFL-209ENST00000581265 SNX30Q5VWJ9 437 aa11.27□□□□□ -0.61
RFFL-209ENST00000581265 PMS2CLQ68D20 193 aa11.27□□□□□ -0.61
RFFL-209ENST00000581265 TCEAL6Q6IPX3 200 aa11.27□□□□□ -0.61
RFFL-209ENST00000581265 DDX42Q86XP3 938 aaKnown RBP eCLIP11.27□□□□□ -0.61
RFFL-209ENST00000581265 NELFCDQ8IXH7 590 aa11.27□□□□□ -0.61
RFFL-209ENST00000581265 PDZD8Q8NEN9 1154 aa11.27□□□□□ -0.61
RFFL-209ENST00000581265 OLIG1Q8TAK6 271 aa11.27□□□□□ -0.61
RFFL-209ENST00000581265 TMEM174Q8WUU8 243 aa11.27□□□□□ -0.61
RFFL-209ENST00000581265 OVCA2Q8WZ82 227 aa11.27□□□□□ -0.61
RFFL-209ENST00000581265 TCEAL3Q969E4 200 aa11.27□□□□□ -0.61
RFFL-209ENST00000581265 SYAP1Q96A49 352 aaPredicted RBP11.27□□□□□ -0.61
RFFL-209ENST00000581265 OTUB2Q96DC9 234 aa11.27□□□□□ -0.61
RFFL-209ENST00000581265 PNKPQ96T60 521 aa11.27□□□□□ -0.61
RFFL-209ENST00000581265 DUSP9Q99956 384 aaKnown RBP11.27□□□□□ -0.61
RFFL-209ENST00000581265 EDEM2Q9BV94 578 aa11.27□□□□□ -0.61
RFFL-209ENST00000581265 DPEP3Q9H4B8 488 aa11.27□□□□□ -0.61
RFFL-209ENST00000581265 SMPD4Q9NXE4 827 aa11.27□□□□□ -0.61
RFFL-209ENST00000581265 CFAP97Q9P2B7 532 aa11.27□□□□□ -0.61
RFFL-209ENST00000581265 TBC1D14Q9P2M4 693 aa11.27□□□□□ -0.61
RFFL-209ENST00000581265 NXF1Q9UBU9 619 aaKnown RBP11.27□□□□□ -0.61
RFFL-209ENST00000581265 CHORDC1Q9UHD1 332 aaPredicted RBP11.27□□□□□ -0.61
RFFL-209ENST00000581265 PTPRDP23468 1912 aa11.27□□□□□ -0.61
RFFL-209ENST00000581265 E2F8A0AVK6 867 aa11.26□□□□□ -0.61
RFFL-209ENST00000581265 FAM92AA1XBS5 289 aa11.26□□□□□ -0.61
RFFL-209ENST00000581265 C4orf47A7E2U8 309 aa11.26□□□□□ -0.61
RFFL-209ENST00000581265 CLDN5O00501 218 aa11.26□□□□□ -0.61
RFFL-209ENST00000581265 TNFRSF10BO14763 440 aa11.26□□□□□ -0.61
RFFL-209ENST00000581265 EXOC3O60645 756 aa11.26□□□□□ -0.61
RFFL-209ENST00000581265 KAT7O95251 611 aa11.26□□□□□ -0.61
RFFL-209ENST00000581265 ADH1CP00326 375 aa11.26□□□□□ -0.61
RFFL-209ENST00000581265 MBL2P11226 248 aaPredicted RBP11.26□□□□□ -0.61
RFFL-209ENST00000581265 GRIA2P42262 883 aa11.26□□□□□ -0.61
RFFL-209ENST00000581265 TNFRSF4P43489 277 aa11.26□□□□□ -0.61
RFFL-209ENST00000581265 KIR2DL1P43626 348 aaPredicted RBP11.26□□□□□ -0.61
RFFL-209ENST00000581265 AP3M2P53677 418 aa11.26□□□□□ -0.61
RFFL-209ENST00000581265 SEC13P55735 322 aa11.26□□□□□ -0.61
RFFL-209ENST00000581265 MESP2Q0VG99 397 aa11.26□□□□□ -0.61
RFFL-209ENST00000581265 ANO7Q6IWH7 933 aa11.26□□□□□ -0.61
RFFL-209ENST00000581265 TMEM92Q6UXU6 159 aa11.26□□□□□ -0.61
RFFL-209ENST00000581265 PAQR9Q6ZVX9 377 aa11.26□□□□□ -0.61
RFFL-209ENST00000581265 CCDC33Q8N5R6 958 aa11.26□□□□□ -0.61
RFFL-209ENST00000581265 IL17RCQ8NAC3 791 aa11.26□□□□□ -0.61
RFFL-209ENST00000581265 MDGA1Q8NFP4 955 aa11.26□□□□□ -0.61
RFFL-209ENST00000581265 GOLGA5Q8TBA6 731 aa11.26□□□□□ -0.61
RFFL-209ENST00000581265 PARD3BQ8TEW8 1205 aa11.26□□□□□ -0.61
RFFL-209ENST00000581265 KCNK16Q96T55 309 aa11.26□□□□□ -0.61
RFFL-209ENST00000581265 BLZF1Q9H2G9 400 aa11.26□□□□□ -0.61
RFFL-209ENST00000581265 SLC39A2Q9NP94 309 aa11.26□□□□□ -0.61
RFFL-209ENST00000581265 COMMD8Q9NX08 183 aa11.26□□□□□ -0.61
RFFL-209ENST00000581265 INVSQ9Y283 1065 aa11.26□□□□□ -0.61
RFFL-209ENST00000581265 CEP295Q9C0D2 2601 aa11.26□□□□□ -0.61
RFFL-209ENST00000581265 LNP1A1A4G5 178 aa11.25□□□□□ -0.61
RFFL-209ENST00000581265 PALM2-AKAP2B1ALY0 433 aaPredicted RBP11.25□□□□□ -0.61
RFFL-209ENST00000581265 KHNYNO15037 678 aaKnown RBP11.25□□□□□ -0.61
RFFL-209ENST00000581265 COCHO43405 550 aa11.25□□□□□ -0.61
RFFL-209ENST00000581265 PHACTR2O75167 634 aa11.25□□□□□ -0.61
RFFL-209ENST00000581265 ALDH1A2O94788 518 aa11.25□□□□□ -0.61
RFFL-209ENST00000581265 TOP3BO95985 862 aaKnown RBP11.25□□□□□ -0.61
RFFL-209ENST00000581265 C4BPAP04003 597 aaKnown RBP11.25□□□□□ -0.61
RFFL-209ENST00000581265 APODP05090 189 aa11.25□□□□□ -0.61
RFFL-209ENST00000581265 ZDHHC11BP0C7U3 371 aa11.25□□□□□ -0.61
RFFL-209ENST00000581265 ADH5P11766 374 aa11.25□□□□□ -0.61
RFFL-209ENST00000581265 HNRNPLP14866 589 aaKnown RBP eCLIP11.25□□□□□ -0.61
RFFL-209ENST00000581265 CASP1P29466 404 aa11.25□□□□□ -0.61
RFFL-209ENST00000581265 TUBP50607 506 aa11.25□□□□□ -0.61
RFFL-209ENST00000581265 CDH8P55286 799 aa11.25□□□□□ -0.61
RFFL-209ENST00000581265 LY6G5CQ5SRR4 150 aa11.25□□□□□ -0.61
RFFL-209ENST00000581265 HECTD3Q5T447 861 aa11.25□□□□□ -0.61
RFFL-209ENST00000581265 EMC10Q5UCC4 262 aa11.25□□□□□ -0.61
RFFL-209ENST00000581265 KIAA1211LQ6NV74 962 aa11.25□□□□□ -0.61
RFFL-209ENST00000581265 C19orf48Q6RUI8 117 aa11.25□□□□□ -0.61
RFFL-209ENST00000581265 SLC9A9Q8IVB4 645 aa11.25□□□□□ -0.61
RFFL-209ENST00000581265 SFTPA1Q8IWL2 248 aa11.25□□□□□ -0.61
RFFL-209ENST00000581265 PHTF2Q8N3S3 785 aa11.25□□□□□ -0.61
RFFL-209ENST00000581265 ALLCQ8N6M5 410 aa11.25□□□□□ -0.61
RFFL-209ENST00000581265 SCAMP5Q8TAC9 235 aa11.25□□□□□ -0.61
RFFL-209ENST00000581265 PLEKHO2Q8TD55 490 aa11.25□□□□□ -0.61
RFFL-209ENST00000581265 KCNV2Q8TDN2 545 aa11.25□□□□□ -0.61
RFFL-209ENST00000581265 GATA6Q92908 595 aa11.25□□□□□ -0.61
RFFL-209ENST00000581265 TNIP3Q96KP6 325 aa11.25□□□□□ -0.61
RFFL-209ENST00000581265 ZFRQ96KR1 1074 aaKnown RBP11.25□□□□□ -0.61
RFFL-209ENST00000581265 BACH2Q9BYV9 841 aa11.25□□□□□ -0.61
RFFL-209ENST00000581265 TPSD1Q9BZJ3 242 aa11.25□□□□□ -0.61
RFFL-209ENST00000581265 DMAC2Q9NW81 257 aa11.25□□□□□ -0.61
RFFL-209ENST00000581265 PCDHA7Q9UN72 937 aa11.25□□□□□ -0.61
RFFL-209ENST00000581265 ATP8B3O60423 1300 aa11.25□□□□□ -0.61
RFFL-209ENST00000581265 MYO16Q9Y6X6 1858 aa11.25□□□□□ -0.61
RFFL-209ENST00000581265 MYO18AQ92614 2054 aaKnown RBP11.24□□□□□ -0.61
RFFL-209ENST00000581265 MYOFQ9NZM1 2061 aa11.24□□□□□ -0.61
RFFL-209ENST00000581265 SGK1O00141 431 aa11.24□□□□□ -0.61
RFFL-209ENST00000581265 SCAMP3O14828 347 aaKnown RBP11.24□□□□□ -0.61
RFFL-209ENST00000581265 KLF8O95600 359 aaPredicted RBP11.24□□□□□ -0.61
RFFL-209ENST00000581265 CEACAM1P13688 526 aa11.24□□□□□ -0.61
RFFL-209ENST00000581265 BCKDHBP21953 392 aa11.24□□□□□ -0.61
RFFL-209ENST00000581265 TIE1P35590 1138 aa11.24□□□□□ -0.61
RFFL-209ENST00000581265 P2RY2P41231 377 aa11.24□□□□□ -0.61
RFFL-209ENST00000581265 AFMP43652 599 aa11.24□□□□□ -0.61
RFFL-209ENST00000581265 CASP4P49662 377 aa11.24□□□□□ -0.61
RFFL-209ENST00000581265 GAD2Q05329 585 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms